Changeset 10483 for branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic

Timestamp:

02/20/14 14:56:39 (11 years ago)

Author:

gkronber

Message:

#2093: merged trunk changes to prepare for reintegration

Location:

branches/LogResidualEvaluator

Files:

• . (modified) (1 prop)
• HeuristicLab.Problems.DataAnalysis.Symbolic (modified) (1 prop)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisSingleObjectivePruningAnalyzer.cs (copied) (copied from trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisSingleObjectivePruningAnalyzer.cs)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Creators/MultiSymbolicDataAnalysisExpressionCreator.cs (modified) (2 diffs)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Crossovers/MultiSymbolicDataAnalysisExpressionCrossover.cs (modified) (1 diff)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Evaluators/SymbolicDataAnalysisEvaluator.cs (modified) (1 diff)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4.csproj (modified) (2 diffs)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Interfaces/ISymbolicDataAnalysisImpactValuesCalculator.cs (modified) (1 diff)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Plugin.cs.frame (modified) (1 diff)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SymbolicDataAnalysisExpressionPruningOperator.cs (copied) (copied from trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SymbolicDataAnalysisExpressionPruningOperator.cs)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SymbolicDataAnalysisSolutionImpactValuesCalculator.cs (modified) (1 diff)

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Creators/MultiSymbolicDataAnalysisExpressionCreator.cs

@@ -95 +95 @@
     }
 
-    public override IOperation Apply() {
+    public override IOperation InstrumentedApply() {
       if (ClonedSymbolicExpressionTreeGrammarParameter.ActualValue == null) {
         SymbolicExpressionTreeGrammarParameter.ActualValue.ReadOnly = true;
@@ -104 +104 @@
         globalScope.Variables.Add(new Core.Variable(ClonedSymbolicExpressionTreeGrammarParameterName, (ISymbolicExpressionGrammar)SymbolicExpressionTreeGrammarParameter.ActualValue.Clone()));
       }
-      return base.Apply();
+      return base.InstrumentedApply();
     }
 

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Crossovers/MultiSymbolicDataAnalysisExpressionCrossover.cs

@@ -109 +109 @@
       InitializeOperators();
       name = "MultiSymbolicDataAnalysisExpressionCrossover";
+
+      SelectedOperatorParameter.ActualName = "SelectedCrossoverOperator";
     }
 

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Evaluators/SymbolicDataAnalysisEvaluator.cs

@@ -35 +35 @@
 namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
   [StorableClass]
-  public abstract class SymbolicDataAnalysisEvaluator<T> : SingleSuccessorOperator,
+  public abstract class SymbolicDataAnalysisEvaluator<T> : InstrumentedOperator,
     ISymbolicDataAnalysisEvaluator<T>, ISymbolicDataAnalysisInterpreterOperator, ISymbolicDataAnalysisBoundedOperator, IStochasticOperator
   where T : class, IDataAnalysisProblemData {

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic-3.4.csproj

@@ -112 +112 @@
   </ItemGroup>
   <ItemGroup>
+    <Compile Include="Analyzers\SymbolicDataAnalysisSingleObjectivePruningAnalyzer.cs" />
     <Compile Include="Analyzers\SymbolicDataAnalysisSingleObjectiveValidationParetoBestSolutionAnalyzer.cs" />
     <Compile Include="Analyzers\SymbolicDataAnalysisSingleObjectiveTrainingParetoBestSolutionAnalyzer.cs" />
@@ -125 +126 @@
       <SubType>Code</SubType>
     </Compile>
+    <Compile Include="SymbolicDataAnalysisExpressionPruningOperator.cs" />
     <Compile Include="Analyzers\SymbolicDataAnalysisVariableFrequencyAnalyzer.cs" />
     <Compile Include="Analyzers\SymbolicDataAnalysisAlleleFrequencyAnalyzer.cs" />

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Interfaces/ISymbolicDataAnalysisImpactValuesCalculator.cs

@@ -1 +1 @@
 using System.Collections.Generic;
+using HeuristicLab.Core;
 using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
 
 namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
-  public interface ISymbolicDataAnalysisSolutionImpactValuesCalculator {
+  public interface ISymbolicDataAnalysisSolutionImpactValuesCalculator : IItem {
     double CalculateReplacementValue(ISymbolicDataAnalysisModel model, ISymbolicExpressionTreeNode node, IDataAnalysisProblemData problemData, IEnumerable<int> rows);
     double CalculateImpactValue(ISymbolicDataAnalysisModel model, ISymbolicExpressionTreeNode node, IDataAnalysisProblemData problemData, IEnumerable<int> rows, double originalQuality = double.NaN);
+    void CalculateImpactAndReplacementValues(ISymbolicDataAnalysisModel model, ISymbolicExpressionTreeNode node, IDataAnalysisProblemData problemData,
+      IEnumerable<int> rows, out double impactValue, out double replacementValue, double originalQuality = double.NaN);
   }
 }

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Plugin.cs.frame

@@ -38 +38 @@
   [PluginDependency("HeuristicLab.Operators", "3.3")]
   [PluginDependency("HeuristicLab.Optimization", "3.3")]
+  [PluginDependency("HeuristicLab.Optimization.Operators", "3.3")]
   [PluginDependency("HeuristicLab.Parameters", "3.3")]
   [PluginDependency("HeuristicLab.Persistence", "3.3")]

branches/LogResidualEvaluator/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SymbolicDataAnalysisSolutionImpactValuesCalculator.cs

@@ -22 +22 @@
 using System.Collections.Generic;
 using HeuristicLab.Common;
+using HeuristicLab.Core;
 using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
+using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
 
 namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
-  public abstract class SymbolicDataAnalysisSolutionImpactValuesCalculator : ISymbolicDataAnalysisSolutionImpactValuesCalculator {
+  [StorableClass]
+  [Item("SymbolicDataAnalysisSolutionImpactValuesCalculator", "Calculates the impact values and replacements values for symbolic expression tree nodes.")]
+  public abstract class SymbolicDataAnalysisSolutionImpactValuesCalculator : Item, ISymbolicDataAnalysisSolutionImpactValuesCalculator {
+    protected SymbolicDataAnalysisSolutionImpactValuesCalculator() { }
+
+    protected SymbolicDataAnalysisSolutionImpactValuesCalculator(SymbolicDataAnalysisSolutionImpactValuesCalculator original, Cloner cloner)
+      : base(original, cloner) { }
+    [StorableConstructor]
+    protected SymbolicDataAnalysisSolutionImpactValuesCalculator(bool deserializing) : base(deserializing) { }
     public abstract double CalculateReplacementValue(ISymbolicDataAnalysisModel model, ISymbolicExpressionTreeNode node, IDataAnalysisProblemData problemData, IEnumerable<int> rows);
     public abstract double CalculateImpactValue(ISymbolicDataAnalysisModel model, ISymbolicExpressionTreeNode node, IDataAnalysisProblemData problemData, IEnumerable<int> rows, double originalQuality = double.NaN);
+    public abstract void CalculateImpactAndReplacementValues(ISymbolicDataAnalysisModel model, ISymbolicExpressionTreeNode node, IDataAnalysisProblemData problemData, IEnumerable<int> rows, out double impactValue, out double replacementValue, double originalQuality = double.NaN);
 
     protected static double CalculateReplacementValue(ISymbolicExpressionTreeNode node, ISymbolicExpressionTree sourceTree, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter,