[5816] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2011 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[6589] | 22 | using System;
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[5816] | 23 | using System.Collections.Generic;
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| 24 | using System.Linq;
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[6613] | 25 | using HeuristicLab.Collections;
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[5816] | 26 | using HeuristicLab.Common;
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| 27 | using HeuristicLab.Core;
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[6589] | 28 | using HeuristicLab.Data;
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[5816] | 29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 30 |
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| 31 | namespace HeuristicLab.Problems.DataAnalysis {
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| 32 | /// <summary>
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| 33 | /// Represents classification solutions that contain an ensemble of multiple classification models
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| 34 | /// </summary>
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| 35 | [StorableClass]
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| 36 | [Item("Classification Ensemble Solution", "A classification solution that contains an ensemble of multiple classification models")]
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| 37 | // [Creatable("Data Analysis")]
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[6592] | 38 | public sealed class ClassificationEnsembleSolution : ClassificationSolution, IClassificationEnsembleSolution {
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[6239] | 39 | public new IClassificationEnsembleModel Model {
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| 40 | get { return (IClassificationEnsembleModel)base.Model; }
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| 41 | }
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| 42 |
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[6613] | 43 | private readonly ItemCollection<IClassificationSolution> classificationSolutions;
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| 44 | public IItemCollection<IClassificationSolution> ClassificationSolutions {
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| 45 | get { return classificationSolutions; }
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| 46 | }
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| 47 |
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[5816] | 48 | [Storable]
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[6239] | 49 | private Dictionary<IClassificationModel, IntRange> trainingPartitions;
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| 50 | [Storable]
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| 51 | private Dictionary<IClassificationModel, IntRange> testPartitions;
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| 52 |
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[6613] | 53 | [StorableConstructor]
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| 54 | private ClassificationEnsembleSolution(bool deserializing)
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| 55 | : base(deserializing) {
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| 56 | classificationSolutions = new ItemCollection<IClassificationSolution>();
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| 57 | }
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| 58 | [StorableHook(HookType.AfterDeserialization)]
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| 59 | private void AfterDeserialization() {
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| 60 | foreach (var model in Model.Models) {
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| 61 | IClassificationProblemData problemData = (IClassificationProblemData)ProblemData.Clone();
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| 62 | problemData.TrainingPartition.Start = trainingPartitions[model].Start;
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| 63 | problemData.TrainingPartition.End = trainingPartitions[model].End;
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| 64 | problemData.TestPartition.Start = testPartitions[model].Start;
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| 65 | problemData.TestPartition.End = testPartitions[model].End;
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[6239] | 66 |
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[6613] | 67 | classificationSolutions.Add(model.CreateClassificationSolution(problemData));
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| 68 | }
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| 69 | RegisterClassificationSolutionsEventHandler();
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| 70 | }
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| 71 |
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[6592] | 72 | private ClassificationEnsembleSolution(ClassificationEnsembleSolution original, Cloner cloner)
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[5816] | 73 | : base(original, cloner) {
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[6239] | 74 | trainingPartitions = new Dictionary<IClassificationModel, IntRange>();
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| 75 | testPartitions = new Dictionary<IClassificationModel, IntRange>();
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[6302] | 76 | foreach (var pair in original.trainingPartitions) {
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| 77 | trainingPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
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[6239] | 78 | }
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[6302] | 79 | foreach (var pair in original.testPartitions) {
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| 80 | testPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
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| 81 | }
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[6613] | 82 |
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| 83 | classificationSolutions = cloner.Clone(original.classificationSolutions);
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| 84 | RegisterClassificationSolutionsEventHandler();
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[5816] | 85 | }
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[6613] | 86 |
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[6239] | 87 | public ClassificationEnsembleSolution(IEnumerable<IClassificationModel> models, IClassificationProblemData problemData)
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[6613] | 88 | : this(models, problemData,
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| 89 | models.Select(m => (IntRange)problemData.TrainingPartition.Clone()),
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| 90 | models.Select(m => (IntRange)problemData.TestPartition.Clone())
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| 91 | ) { }
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[5816] | 92 |
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[6239] | 93 | public ClassificationEnsembleSolution(IEnumerable<IClassificationModel> models, IClassificationProblemData problemData, IEnumerable<IntRange> trainingPartitions, IEnumerable<IntRange> testPartitions)
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[6613] | 94 | : base(new ClassificationEnsembleModel(Enumerable.Empty<IClassificationModel>()), new ClassificationEnsembleProblemData(problemData)) {
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[6239] | 95 | this.trainingPartitions = new Dictionary<IClassificationModel, IntRange>();
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| 96 | this.testPartitions = new Dictionary<IClassificationModel, IntRange>();
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[6613] | 97 | this.classificationSolutions = new ItemCollection<IClassificationSolution>();
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| 98 |
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| 99 | List<IClassificationSolution> solutions = new List<IClassificationSolution>();
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| 100 | var modelEnumerator = models.GetEnumerator();
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| 101 | var trainingPartitionEnumerator = trainingPartitions.GetEnumerator();
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| 102 | var testPartitionEnumerator = testPartitions.GetEnumerator();
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| 103 |
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| 104 | while (modelEnumerator.MoveNext() & trainingPartitionEnumerator.MoveNext() & testPartitionEnumerator.MoveNext()) {
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| 105 | var p = (IClassificationProblemData)problemData.Clone();
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| 106 | p.TrainingPartition.Start = trainingPartitionEnumerator.Current.Start;
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| 107 | p.TrainingPartition.End = trainingPartitionEnumerator.Current.End;
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| 108 | p.TestPartition.Start = testPartitionEnumerator.Current.Start;
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| 109 | p.TestPartition.End = testPartitionEnumerator.Current.End;
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| 110 |
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| 111 | solutions.Add(modelEnumerator.Current.CreateClassificationSolution(p));
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| 112 | }
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| 113 | if (modelEnumerator.MoveNext() | trainingPartitionEnumerator.MoveNext() | testPartitionEnumerator.MoveNext()) {
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| 114 | throw new ArgumentException();
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| 115 | }
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| 116 |
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| 117 | RegisterClassificationSolutionsEventHandler();
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| 118 | classificationSolutions.AddRange(solutions);
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[6239] | 119 | }
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| 120 |
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[5816] | 121 | public override IDeepCloneable Clone(Cloner cloner) {
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| 122 | return new ClassificationEnsembleSolution(this, cloner);
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| 123 | }
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[6613] | 124 | private void RegisterClassificationSolutionsEventHandler() {
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| 125 | classificationSolutions.ItemsAdded += new CollectionItemsChangedEventHandler<IClassificationSolution>(classificationSolutions_ItemsAdded);
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| 126 | classificationSolutions.ItemsRemoved += new CollectionItemsChangedEventHandler<IClassificationSolution>(classificationSolutions_ItemsRemoved);
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| 127 | classificationSolutions.CollectionReset += new CollectionItemsChangedEventHandler<IClassificationSolution>(classificationSolutions_CollectionReset);
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| 128 | }
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[5816] | 129 |
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[6589] | 130 | protected override void RecalculateResults() {
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| 131 | CalculateResults();
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| 132 | }
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| 133 |
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[6613] | 134 | #region Evaluation
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[6239] | 135 | public override IEnumerable<double> EstimatedTrainingClassValues {
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| 136 | get {
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| 137 | var rows = ProblemData.TrainingIndizes;
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| 138 | var estimatedValuesEnumerators = (from model in Model.Models
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| 139 | select new { Model = model, EstimatedValuesEnumerator = model.GetEstimatedClassValues(ProblemData.Dataset, rows).GetEnumerator() })
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| 140 | .ToList();
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| 141 | var rowsEnumerator = rows.GetEnumerator();
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| 142 | // aggregate to make sure that MoveNext is called for all enumerators
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| 143 | while (rowsEnumerator.MoveNext() & estimatedValuesEnumerators.Select(en => en.EstimatedValuesEnumerator.MoveNext()).Aggregate(true, (acc, b) => acc & b)) {
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| 144 | int currentRow = rowsEnumerator.Current;
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[5816] | 145 |
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[6239] | 146 | var selectedEnumerators = from pair in estimatedValuesEnumerators
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[6254] | 147 | where RowIsTrainingForModel(currentRow, pair.Model) && !RowIsTestForModel(currentRow, pair.Model)
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[6239] | 148 | select pair.EstimatedValuesEnumerator;
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| 149 | yield return AggregateEstimatedClassValues(selectedEnumerators.Select(x => x.Current));
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| 150 | }
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| 151 | }
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| 152 | }
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| 153 |
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| 154 | public override IEnumerable<double> EstimatedTestClassValues {
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| 155 | get {
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| 156 | var rows = ProblemData.TestIndizes;
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| 157 | var estimatedValuesEnumerators = (from model in Model.Models
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| 158 | select new { Model = model, EstimatedValuesEnumerator = model.GetEstimatedClassValues(ProblemData.Dataset, rows).GetEnumerator() })
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| 159 | .ToList();
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| 160 | var rowsEnumerator = ProblemData.TestIndizes.GetEnumerator();
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| 161 | // aggregate to make sure that MoveNext is called for all enumerators
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| 162 | while (rowsEnumerator.MoveNext() & estimatedValuesEnumerators.Select(en => en.EstimatedValuesEnumerator.MoveNext()).Aggregate(true, (acc, b) => acc & b)) {
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| 163 | int currentRow = rowsEnumerator.Current;
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| 164 |
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| 165 | var selectedEnumerators = from pair in estimatedValuesEnumerators
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[6254] | 166 | where RowIsTestForModel(currentRow, pair.Model)
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[6239] | 167 | select pair.EstimatedValuesEnumerator;
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| 168 |
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| 169 | yield return AggregateEstimatedClassValues(selectedEnumerators.Select(x => x.Current));
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| 170 | }
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| 171 | }
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| 172 | }
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| 173 |
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[6254] | 174 | private bool RowIsTrainingForModel(int currentRow, IClassificationModel model) {
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| 175 | return trainingPartitions == null || !trainingPartitions.ContainsKey(model) ||
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| 176 | (trainingPartitions[model].Start <= currentRow && currentRow < trainingPartitions[model].End);
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| 177 | }
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| 178 |
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| 179 | private bool RowIsTestForModel(int currentRow, IClassificationModel model) {
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| 180 | return testPartitions == null || !testPartitions.ContainsKey(model) ||
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| 181 | (testPartitions[model].Start <= currentRow && currentRow < testPartitions[model].End);
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| 182 | }
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| 183 |
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[6239] | 184 | public override IEnumerable<double> GetEstimatedClassValues(IEnumerable<int> rows) {
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| 185 | return from xs in GetEstimatedClassValueVectors(ProblemData.Dataset, rows)
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| 186 | select AggregateEstimatedClassValues(xs);
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| 187 | }
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| 188 |
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[5816] | 189 | public IEnumerable<IEnumerable<double>> GetEstimatedClassValueVectors(Dataset dataset, IEnumerable<int> rows) {
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[6239] | 190 | var estimatedValuesEnumerators = (from model in Model.Models
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[5816] | 191 | select model.GetEstimatedClassValues(dataset, rows).GetEnumerator())
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| 192 | .ToList();
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| 193 |
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| 194 | while (estimatedValuesEnumerators.All(en => en.MoveNext())) {
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| 195 | yield return from enumerator in estimatedValuesEnumerators
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| 196 | select enumerator.Current;
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| 197 | }
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| 198 | }
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| 199 |
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[6239] | 200 | private double AggregateEstimatedClassValues(IEnumerable<double> estimatedClassValues) {
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| 201 | return estimatedClassValues
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| 202 | .GroupBy(x => x)
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| 203 | .OrderBy(g => -g.Count())
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| 204 | .Select(g => g.Key)
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[6254] | 205 | .DefaultIfEmpty(double.NaN)
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[6239] | 206 | .First();
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[5816] | 207 | }
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[6613] | 208 | #endregion
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[6520] | 209 |
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[6613] | 210 | public void AddClassificationSolutions(IEnumerable<IClassificationSolution> solutions) {
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| 211 | classificationSolutions.AddRange(solutions);
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| 212 | }
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| 213 | public void RemoveClassificationSolutions(IEnumerable<IClassificationSolution> solutions) {
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| 214 | classificationSolutions.RemoveRange(solutions);
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| 215 | }
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[6520] | 216 |
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[6613] | 217 | private void classificationSolutions_ItemsAdded(object sender, CollectionItemsChangedEventArgs<IClassificationSolution> e) {
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| 218 | foreach (var solution in e.Items) AddClassificationSolution(solution);
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[6520] | 219 | RecalculateResults();
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| 220 | }
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[6613] | 221 | private void classificationSolutions_ItemsRemoved(object sender, CollectionItemsChangedEventArgs<IClassificationSolution> e) {
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| 222 | foreach (var solution in e.Items) RemoveClassificationSolution(solution);
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| 223 | RecalculateResults();
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| 224 | }
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| 225 | private void classificationSolutions_CollectionReset(object sender, CollectionItemsChangedEventArgs<IClassificationSolution> e) {
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| 226 | foreach (var solution in e.OldItems) RemoveClassificationSolution(solution);
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| 227 | foreach (var solution in e.Items) AddClassificationSolution(solution);
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| 228 | RecalculateResults();
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| 229 | }
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[6520] | 230 |
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[6613] | 231 | private void AddClassificationSolution(IClassificationSolution solution) {
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| 232 | if (Model.Models.Contains(solution.Model)) throw new ArgumentException();
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| 233 | Model.Add(solution.Model);
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| 234 | trainingPartitions[solution.Model] = solution.ProblemData.TrainingPartition;
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| 235 | testPartitions[solution.Model] = solution.ProblemData.TestPartition;
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| 236 | }
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[6520] | 237 |
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[6613] | 238 | private void RemoveClassificationSolution(IClassificationSolution solution) {
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| 239 | if (!Model.Models.Contains(solution.Model)) throw new ArgumentException();
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| 240 | Model.Remove(solution.Model);
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| 241 | trainingPartitions.Remove(solution.Model);
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| 242 | testPartitions.Remove(solution.Model);
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[6520] | 243 | }
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[5816] | 244 | }
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| 245 | }
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