1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2011 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System.Collections.Generic;
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23 | using System.Linq;
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24 | using HeuristicLab.Common;
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25 | using HeuristicLab.Core;
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26 | using HeuristicLab.Data;
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27 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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28 | using HeuristicLab.Operators;
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29 | using HeuristicLab.Parameters;
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30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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31 | using HeuristicLab.Optimization;
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32 | using System;
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33 |
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34 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Classification {
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35 | /// <summary>
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36 | /// Represents a symbolic classification model
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37 | /// </summary>
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38 | [StorableClass]
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39 | [Item(Name = "SymbolicDiscriminantFunctionClassificationModel", Description = "Represents a symbolic classification model unsing a discriminant function.")]
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40 | public class SymbolicDiscriminantFunctionClassificationModel : SymbolicDataAnalysisModel, ISymbolicDiscriminantFunctionClassificationModel {
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41 |
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42 | [Storable]
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43 | private double[] thresholds;
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44 | public IEnumerable<double> Thresholds {
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45 | get { return (IEnumerable<double>)thresholds.Clone(); }
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46 | private set { thresholds = value.ToArray(); }
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47 | }
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48 | [Storable]
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49 | private double[] classValues;
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50 | public IEnumerable<double> ClassValues {
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51 | get { return (IEnumerable<double>)classValues.Clone(); }
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52 | private set { classValues = value.ToArray(); }
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53 | }
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54 | [Storable]
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55 | private double lowerEstimationLimit;
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56 | public double LowerEstimationLimit { get { return lowerEstimationLimit; } }
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57 | [Storable]
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58 | private double upperEstimationLimit;
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59 | public double UpperEstimationLimit { get { return upperEstimationLimit; } }
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60 |
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61 | [StorableConstructor]
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62 | protected SymbolicDiscriminantFunctionClassificationModel(bool deserializing) : base(deserializing) { }
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63 | protected SymbolicDiscriminantFunctionClassificationModel(SymbolicDiscriminantFunctionClassificationModel original, Cloner cloner)
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64 | : base(original, cloner) {
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65 | classValues = (double[])original.classValues.Clone();
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66 | thresholds = (double[])original.thresholds.Clone();
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67 | lowerEstimationLimit = original.lowerEstimationLimit;
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68 | upperEstimationLimit = original.upperEstimationLimit;
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69 | }
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70 | public SymbolicDiscriminantFunctionClassificationModel(ISymbolicExpressionTree tree, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter,
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71 | double lowerEstimationLimit = double.MinValue, double upperEstimationLimit = double.MaxValue)
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72 | : base(tree, interpreter) {
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73 | thresholds = new double[] { double.NegativeInfinity };
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74 | classValues = new double[] { 0.0 };
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75 | this.lowerEstimationLimit = lowerEstimationLimit;
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76 | this.upperEstimationLimit = upperEstimationLimit;
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77 | }
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78 |
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79 | public override IDeepCloneable Clone(Cloner cloner) {
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80 | return new SymbolicDiscriminantFunctionClassificationModel(this, cloner);
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81 | }
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82 |
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83 | public void SetThresholdsAndClassValues(IEnumerable<double> thresholds, IEnumerable<double> classValues) {
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84 | var classValuesArr = classValues.ToArray();
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85 | var thresholdsArr = thresholds.ToArray();
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86 | if (thresholdsArr.Length != classValuesArr.Length) throw new ArgumentException();
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87 |
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88 | this.classValues = classValuesArr;
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89 | this.thresholds = thresholdsArr;
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90 | OnThresholdsChanged(EventArgs.Empty);
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91 | }
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92 |
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93 | public IEnumerable<double> GetEstimatedValues(Dataset dataset, IEnumerable<int> rows) {
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94 | return Interpreter.GetSymbolicExpressionTreeValues(SymbolicExpressionTree, dataset, rows)
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95 | .LimitToRange(lowerEstimationLimit, upperEstimationLimit);
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96 | }
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97 |
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98 | public IEnumerable<double> GetEstimatedClassValues(Dataset dataset, IEnumerable<int> rows) {
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99 | foreach (var x in GetEstimatedValues(dataset, rows)) {
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100 | int classIndex = 0;
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101 | // find first threshold value which is larger than x => class index = threshold index + 1
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102 | for (int i = 0; i < thresholds.Length; i++) {
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103 | if (x > thresholds[i]) classIndex++;
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104 | else break;
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105 | }
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106 | yield return classValues.ElementAt(classIndex - 1);
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107 | }
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108 | }
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109 |
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110 | #region events
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111 | public event EventHandler ThresholdsChanged;
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112 | protected virtual void OnThresholdsChanged(EventArgs e) {
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113 | var listener = ThresholdsChanged;
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114 | if (listener != null) listener(this, e);
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115 | }
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116 | #endregion
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117 |
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118 | public static void Scale(SymbolicDiscriminantFunctionClassificationModel model, IClassificationProblemData problemData) {
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119 | var dataset = problemData.Dataset;
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120 | var targetVariable = problemData.TargetVariable;
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121 | var rows = problemData.TrainingIndizes;
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122 | var estimatedValues = model.Interpreter.GetSymbolicExpressionTreeValues(model.SymbolicExpressionTree, dataset, rows);
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123 | var targetValues = dataset.GetEnumeratedVariableValues(targetVariable, rows);
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124 | double alpha;
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125 | double beta;
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126 | OnlineCalculatorError errorState;
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127 | OnlineLinearScalingParameterCalculator.Calculate(estimatedValues, targetValues, out alpha, out beta, out errorState);
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128 | if (errorState != OnlineCalculatorError.None) return;
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129 |
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130 | ConstantTreeNode alphaTreeNode = null;
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131 | ConstantTreeNode betaTreeNode = null;
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132 | // check if model has been scaled previously by analyzing the structure of the tree
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133 | var startNode = model.SymbolicExpressionTree.Root.GetSubtree(0);
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134 | if (startNode.GetSubtree(0).Symbol is Addition) {
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135 | var addNode = startNode.GetSubtree(0);
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136 | if (addNode.SubtreesCount == 2 && addNode.GetSubtree(0).Symbol is Multiplication && addNode.GetSubtree(1).Symbol is Constant) {
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137 | alphaTreeNode = addNode.GetSubtree(1) as ConstantTreeNode;
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138 | var mulNode = addNode.GetSubtree(0);
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139 | if (mulNode.SubtreesCount == 2 && mulNode.GetSubtree(1).Symbol is Constant) {
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140 | betaTreeNode = mulNode.GetSubtree(1) as ConstantTreeNode;
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141 | }
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142 | }
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143 | }
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144 | // if tree structure matches the structure necessary for linear scaling then reuse the existing tree nodes
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145 | if (alphaTreeNode != null && betaTreeNode != null) {
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146 | betaTreeNode.Value *= beta;
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147 | alphaTreeNode.Value *= beta;
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148 | alphaTreeNode.Value += alpha;
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149 | } else {
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150 | var mainBranch = startNode.GetSubtree(0);
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151 | startNode.RemoveSubtree(0);
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152 | var scaledMainBranch = MakeSum(MakeProduct(beta, mainBranch), alpha);
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153 | startNode.AddSubtree(scaledMainBranch);
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154 | }
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155 | }
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156 |
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157 | private static ISymbolicExpressionTreeNode MakeSum(ISymbolicExpressionTreeNode treeNode, double alpha) {
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158 | if (alpha.IsAlmost(0.0)) {
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159 | return treeNode;
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160 | } else {
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161 | var node = (new Addition()).CreateTreeNode();
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162 | var alphaConst = MakeConstant(alpha);
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163 | node.AddSubtree(treeNode);
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164 | node.AddSubtree(alphaConst);
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165 | return node;
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166 | }
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167 | }
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168 |
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169 | private static ISymbolicExpressionTreeNode MakeProduct(double beta, ISymbolicExpressionTreeNode treeNode) {
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170 | if (beta.IsAlmost(1.0)) {
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171 | return treeNode;
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172 | } else {
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173 | var node = (new Multiplication()).CreateTreeNode();
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174 | var betaConst = MakeConstant(beta);
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175 | node.AddSubtree(treeNode);
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176 | node.AddSubtree(betaConst);
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177 | return node;
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178 | }
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179 | }
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180 |
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181 | private static ISymbolicExpressionTreeNode MakeConstant(double c) {
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182 | var node = (ConstantTreeNode)(new Constant()).CreateTreeNode();
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183 | node.Value = c;
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184 | return node;
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185 | }
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186 | }
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187 | }
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