[645] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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| 23 | using System.Collections.Generic;
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| 24 | using System.Linq;
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| 25 | using System.Text;
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| 26 | using HeuristicLab.Core;
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| 27 | using HeuristicLab.Data;
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| 28 | using System.Xml;
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| 29 | using System.Globalization;
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| 30 |
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| 31 | namespace HeuristicLab.GP {
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| 32 |
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| 33 | public class LightWeightFunction {
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[767] | 34 | public byte arity = 0;
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[645] | 35 | public IFunction functionType;
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| 36 | public List<double> data = new List<double>();
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| 37 |
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| 38 | public LightWeightFunction Clone() {
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| 39 | LightWeightFunction clone = new LightWeightFunction();
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| 40 | clone.arity = arity;
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| 41 | clone.functionType = functionType;
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| 42 | clone.data.AddRange(data);
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| 43 | return clone;
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| 44 | }
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| 45 | }
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| 46 |
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| 47 | public class BakedFunctionTree : ItemBase, IFunctionTree {
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| 48 | private List<LightWeightFunction> linearRepresentation;
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| 49 | public List<LightWeightFunction> LinearRepresentation {
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| 50 | get {
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| 51 | FlattenVariables();
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| 52 | FlattenTrees();
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| 53 | return linearRepresentation;
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| 54 | }
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| 55 | }
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| 56 | private bool treesExpanded = false;
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| 57 | private List<IFunctionTree> subTrees;
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| 58 | private bool variablesExpanded = false;
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| 59 | private List<IVariable> variables;
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| 60 |
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| 61 | public BakedFunctionTree() {
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| 62 | linearRepresentation = new List<LightWeightFunction>();
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| 63 | }
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| 64 |
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| 65 | internal BakedFunctionTree(IFunction function)
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| 66 | : this() {
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| 67 | LightWeightFunction fun = new LightWeightFunction();
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| 68 | fun.functionType = function;
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| 69 | linearRepresentation.Add(fun);
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| 70 | treesExpanded = true;
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| 71 | subTrees = new List<IFunctionTree>();
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| 72 | variables = new List<IVariable>();
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| 73 | variablesExpanded = true;
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| 74 | foreach(IVariableInfo variableInfo in function.VariableInfos) {
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| 75 | if(variableInfo.Local) {
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| 76 | variables.Add((IVariable)function.GetVariable(variableInfo.FormalName).Clone());
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| 77 | }
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| 78 | }
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| 79 | }
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| 80 |
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| 81 | internal BakedFunctionTree(IFunctionTree tree)
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| 82 | : this() {
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| 83 | LightWeightFunction fun = new LightWeightFunction();
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| 84 | fun.functionType = tree.Function;
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| 85 | linearRepresentation.Add(fun);
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| 86 | foreach(IVariable variable in tree.LocalVariables) {
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| 87 | IItem value = variable.Value;
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| 88 | fun.data.Add(GetDoubleValue(value));
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| 89 | }
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| 90 | foreach(IFunctionTree subTree in tree.SubTrees) {
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| 91 | AddSubTree(new BakedFunctionTree(subTree));
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| 92 | }
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| 93 | }
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| 94 |
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| 95 | private double GetDoubleValue(IItem value) {
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| 96 | if(value is DoubleData) {
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| 97 | return ((DoubleData)value).Data;
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| 98 | } else if(value is ConstrainedDoubleData) {
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| 99 | return ((ConstrainedDoubleData)value).Data;
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| 100 | } else if(value is IntData) {
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| 101 | return ((IntData)value).Data;
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| 102 | } else if(value is ConstrainedIntData) {
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| 103 | return ((ConstrainedIntData)value).Data;
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| 104 | } else throw new NotSupportedException("Invalid datatype of local variable for GP");
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| 105 | }
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| 106 |
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| 107 | private int BranchLength(int branchRoot) {
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| 108 | int arity = linearRepresentation[branchRoot].arity;
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| 109 | int length = 1;
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| 110 | for(int i = 0; i < arity; i++) {
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| 111 | length += BranchLength(branchRoot + length);
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| 112 | }
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| 113 | return length;
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| 114 | }
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| 115 |
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| 116 | private void FlattenTrees() {
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| 117 | if(treesExpanded) {
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[767] | 118 | linearRepresentation[0].arity = (byte)subTrees.Count;
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[645] | 119 | foreach(BakedFunctionTree subTree in subTrees) {
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| 120 | subTree.FlattenVariables();
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| 121 | subTree.FlattenTrees();
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| 122 | linearRepresentation.AddRange(subTree.linearRepresentation);
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| 123 | }
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| 124 | treesExpanded = false;
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| 125 | subTrees = null;
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| 126 | }
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| 127 | }
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| 128 |
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| 129 | private void FlattenVariables() {
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| 130 | if(variablesExpanded) {
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| 131 | linearRepresentation[0].data.Clear();
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| 132 | foreach(IVariable variable in variables) {
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| 133 | linearRepresentation[0].data.Add(GetDoubleValue(variable.Value));
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| 134 | }
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| 135 | variablesExpanded = false;
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| 136 | variables = null;
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| 137 | }
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| 138 | }
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| 139 |
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| 140 | public int Size {
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| 141 | get {
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| 142 | if(treesExpanded) {
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| 143 | int size = 1;
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| 144 | foreach(BakedFunctionTree tree in subTrees) {
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| 145 | size += tree.Size;
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| 146 | }
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| 147 | return size;
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| 148 | } else
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| 149 | return linearRepresentation.Count;
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| 150 | }
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| 151 | }
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| 152 |
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| 153 | public int Height {
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| 154 | get {
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| 155 | if(treesExpanded) {
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| 156 | int height = 0;
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| 157 | foreach(IFunctionTree subTree in subTrees) {
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| 158 | int curHeight = subTree.Height;
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| 159 | if(curHeight > height) height = curHeight;
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| 160 | }
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| 161 | return height+1;
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| 162 | } else {
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| 163 | int nextBranchStart;
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| 164 | return BranchHeight(0, out nextBranchStart);
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| 165 | }
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| 166 | }
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| 167 | }
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| 168 |
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| 169 | private int BranchHeight(int branchStart, out int nextBranchStart) {
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| 170 | LightWeightFunction f = linearRepresentation[branchStart];
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| 171 | int height = 0;
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| 172 | branchStart++;
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| 173 | for(int i = 0; i < f.arity; i++) {
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| 174 | int curHeight = BranchHeight(branchStart, out nextBranchStart);
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| 175 | if(curHeight > height) height = curHeight;
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| 176 | branchStart = nextBranchStart;
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| 177 | }
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| 178 | nextBranchStart = branchStart;
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| 179 | return height + 1;
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| 180 | }
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| 181 |
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| 182 | public IList<IFunctionTree> SubTrees {
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| 183 | get {
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| 184 | if(!treesExpanded) {
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| 185 | subTrees = new List<IFunctionTree>();
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| 186 | int arity = linearRepresentation[0].arity;
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| 187 | int branchIndex = 1;
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| 188 | for(int i = 0; i < arity; i++) {
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| 189 | BakedFunctionTree subTree = new BakedFunctionTree();
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| 190 | int length = BranchLength(branchIndex);
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| 191 | for(int j = branchIndex; j < branchIndex + length; j++) {
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| 192 | subTree.linearRepresentation.Add(linearRepresentation[j]);
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| 193 | }
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| 194 | branchIndex += length;
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| 195 | subTrees.Add(subTree);
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| 196 | }
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| 197 | treesExpanded = true;
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| 198 | linearRepresentation.RemoveRange(1, linearRepresentation.Count - 1);
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| 199 | linearRepresentation[0].arity = 0;
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| 200 | }
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| 201 | return subTrees;
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| 202 | }
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| 203 | }
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| 204 |
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| 205 | public ICollection<IVariable> LocalVariables {
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| 206 | get {
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| 207 | if(!variablesExpanded) {
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| 208 | variables = new List<IVariable>();
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| 209 | IFunction function = Function;
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| 210 | int localVariableIndex = 0;
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| 211 | foreach(IVariableInfo variableInfo in function.VariableInfos) {
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| 212 | if(variableInfo.Local) {
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| 213 | IVariable clone = (IVariable)function.GetVariable(variableInfo.FormalName).Clone();
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| 214 | IItem value = clone.Value;
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| 215 | if(value is ConstrainedDoubleData) {
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| 216 | ((ConstrainedDoubleData)value).Data = linearRepresentation[0].data[localVariableIndex];
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| 217 | } else if(value is ConstrainedIntData) {
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| 218 | ((ConstrainedIntData)value).Data = (int)linearRepresentation[0].data[localVariableIndex];
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| 219 | } else if(value is DoubleData) {
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| 220 | ((DoubleData)value).Data = linearRepresentation[0].data[localVariableIndex];
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| 221 | } else if(value is IntData) {
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| 222 | ((IntData)value).Data = (int)linearRepresentation[0].data[localVariableIndex];
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| 223 | } else throw new NotSupportedException("Invalid local variable type for GP.");
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| 224 | variables.Add(clone);
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| 225 | localVariableIndex++;
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| 226 | }
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| 227 | }
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| 228 | variablesExpanded = true;
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| 229 | linearRepresentation[0].data.Clear();
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| 230 | }
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| 231 | return variables;
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| 232 | }
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| 233 | }
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| 234 |
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| 235 | public IFunction Function {
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| 236 | get { return linearRepresentation[0].functionType; }
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| 237 | }
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| 238 |
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| 239 | public IVariable GetLocalVariable(string name) {
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| 240 | foreach(IVariable var in LocalVariables) {
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| 241 | if(var.Name == name) return var;
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| 242 | }
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| 243 | return null;
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| 244 | }
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| 245 |
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| 246 | public void AddVariable(IVariable variable) {
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| 247 | throw new NotSupportedException();
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| 248 | }
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| 249 |
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| 250 | public void RemoveVariable(string name) {
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| 251 | throw new NotSupportedException();
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| 252 | }
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| 253 |
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| 254 | public void AddSubTree(IFunctionTree tree) {
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| 255 | if(!treesExpanded) throw new InvalidOperationException();
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| 256 | subTrees.Add(tree);
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| 257 | }
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| 258 |
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| 259 | public void InsertSubTree(int index, IFunctionTree tree) {
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| 260 | if(!treesExpanded) throw new InvalidOperationException();
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| 261 | subTrees.Insert(index, tree);
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| 262 | }
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| 263 |
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| 264 | public void RemoveSubTree(int index) {
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| 265 | // sanity check
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| 266 | if(!treesExpanded) throw new InvalidOperationException();
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| 267 | subTrees.RemoveAt(index);
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| 268 | }
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| 269 |
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| 270 | public override XmlNode GetXmlNode(string name, XmlDocument document, IDictionary<Guid, IStorable> persistedObjects) {
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| 271 | FlattenVariables();
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| 272 | FlattenTrees();
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| 273 | XmlNode node = base.GetXmlNode(name, document, persistedObjects);
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| 274 | XmlNode linearRepresentationNode = document.CreateElement("LinearRepresentation");
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| 275 | foreach(LightWeightFunction f in linearRepresentation) {
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| 276 | XmlNode entryNode = PersistenceManager.Persist("FunctionType", f.functionType, document, persistedObjects);
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| 277 | XmlAttribute arityAttribute = document.CreateAttribute("Arity");
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| 278 | arityAttribute.Value = f.arity+"";
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| 279 | entryNode.Attributes.Append(arityAttribute);
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| 280 | if(f.data.Count > 0) {
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| 281 | XmlAttribute dataAttribute = document.CreateAttribute("Data");
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| 282 | dataAttribute.Value = GetString(f.data);
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| 283 | entryNode.Attributes.Append(dataAttribute);
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| 284 | }
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| 285 | linearRepresentationNode.AppendChild(entryNode);
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| 286 | }
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| 287 |
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| 288 | node.AppendChild(linearRepresentationNode);
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| 289 | return node;
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| 290 | }
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| 291 |
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| 292 | public override void Populate(XmlNode node, IDictionary<Guid, IStorable> restoredObjects) {
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| 293 | base.Populate(node, restoredObjects);
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| 294 | XmlNode linearRepresentationNode = node.SelectSingleNode("LinearRepresentation");
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| 295 | foreach(XmlNode entryNode in linearRepresentationNode.ChildNodes) {
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| 296 | LightWeightFunction f = new LightWeightFunction();
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[767] | 297 | f.arity = byte.Parse(entryNode.Attributes["Arity"].Value, CultureInfo.InvariantCulture);
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[645] | 298 | if(entryNode.Attributes["Data"]!=null)
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| 299 | f.data = GetList<double>(entryNode.Attributes["Data"].Value, s => double.Parse(s, CultureInfo.InvariantCulture));
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| 300 | f.functionType = (IFunction)PersistenceManager.Restore(entryNode, restoredObjects);
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| 301 | linearRepresentation.Add(f);
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| 302 | }
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| 303 | treesExpanded = false;
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| 304 | variablesExpanded = false;
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| 305 | }
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| 306 |
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| 307 | private string GetString(IEnumerable<double> xs) {
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| 308 | StringBuilder builder = new StringBuilder();
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| 309 | foreach(double x in xs) {
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| 310 | builder.Append(x.ToString("r", CultureInfo.InvariantCulture) + "; ");
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| 311 | }
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| 312 | if(builder.Length > 0) builder.Remove(builder.Length - 2, 2);
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| 313 | return builder.ToString();
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| 314 | }
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| 315 |
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| 316 | private List<T> GetList<T>(string s, Converter<string, T> converter) {
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| 317 | List<T> result = new List<T>();
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| 318 | string[] tokens = s.Split(new char[] { ';', ' ' }, StringSplitOptions.RemoveEmptyEntries);
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| 319 | foreach(string token in tokens) {
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| 320 | T x = converter(token.Trim());
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| 321 | result.Add(x);
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| 322 | }
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| 323 | return result;
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| 324 | }
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| 325 |
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| 326 | public override object Clone(IDictionary<Guid, object> clonedObjects) {
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| 327 | BakedFunctionTree clone = new BakedFunctionTree();
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| 328 | // in case the user (de)serialized the tree between evaluation and selection we have to flatten the tree again.
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| 329 | if(treesExpanded) FlattenTrees();
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| 330 | if(variablesExpanded) FlattenVariables();
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| 331 | foreach(LightWeightFunction f in linearRepresentation) {
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| 332 | clone.linearRepresentation.Add(f.Clone());
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| 333 | }
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| 334 | return clone;
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| 335 | }
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| 336 |
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| 337 | public override IView CreateView() {
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| 338 | return new FunctionTreeView(this);
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| 339 | }
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| 340 |
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| 341 | //public override string ToString() {
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| 342 | // SymbolicExpressionExporter exporter = new SymbolicExpressionExporter();
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| 343 | // exporter.Visit(this);
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| 344 | // return exporter.GetStringRepresentation();
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| 345 | //}
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| 346 | }
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| 347 | }
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