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Ignore:
Timestamp:
07/19/17 14:32:57 (7 years ago)
Author:
pfleck
Message:

#2809:

  • Removed FilterLogic.
  • Made Contents storable and implemented proper cloning.
Location:
branches/DataPreprocessing Cleanup
Files:
1 added
1 deleted
25 edited

Legend:

Unmodified
Added
Removed

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/CheckedTransformationListView.cs

    r15110 r15274  
    5151          // TODO: Avoid accessing parent view
    5252          var transformationView = (TransformationView)Parent;
    53           var columnNames = transformationView.Content.Data.VariableNames;
     53          var columnNames = transformationView.Content.PreprocessingData.VariableNames;
    5454
    5555          return (ITransformation)typeSelectorDialog.TypeSelector.CreateInstanceOfSelectedType(new[] { columnNames });

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/DataGridContentView.cs

    r15270 r15274  
    8585      base.RegisterContentEvents();
    8686      Content.Changed += Content_Changed;
    87       Content.FilterLogic.FilterChanged += FilterLogic_FilterChanged;
     87      Content.PreprocessingData.FilterChanged += FilterLogic_FilterChanged;
    8888    }
    8989
    … …  
    9191      base.DeregisterContentEvents();
    9292      Content.Changed -= Content_Changed;
    93       Content.FilterLogic.FilterChanged -= FilterLogic_FilterChanged;
     93      Content.PreprocessingData.FilterChanged -= FilterLogic_FilterChanged;
    9494    }
    9595
    … …  
    9898      searchIterator = null;
    9999      if (findAndReplaceDialog != null && !findAndReplaceDialog.IsDisposed) {
    100         if (Content.FilterLogic.IsFiltered) {
     100        if (Content.PreprocessingData.IsFiltered) {
    101101          findAndReplaceDialog.DisableReplace();
    102102        } else {
    … …  
    104104        }
    105105      }
    106       btnReplace.Enabled = !Content.FilterLogic.IsFiltered;
     106      btnReplace.Enabled = !Content.PreprocessingData.IsFiltered;
    107107    }
    108108
    … …  
    126126      string errorMessage;
    127127      if (!String.IsNullOrEmpty(e.FormattedValue.ToString())) {
    128         if (dataGridView.IsCurrentCellInEditMode && Content.FilterLogic.IsFiltered) {
     128        if (dataGridView.IsCurrentCellInEditMode && Content.PreprocessingData.IsFiltered) {
    129129          errorMessage = "A filter is active, you cannot modify data. Press ESC to exit edit mode.";
    130130        } else {
    … …  
    271271        searchIterator = null;
    272272        DataGridView.SelectionChanged += DataGridView_SelectionChanged_FindAndReplace;
    273         if (Content.FilterLogic.IsFiltered) {
     273        if (Content.PreprocessingData.IsFiltered) {
    274274          findAndReplaceDialog.DisableReplace();
    275275        }
    … …  
    405405      ComparisonOperation comparisonOperation = findAndReplaceDialog.GetComparisonOperation();
    406406      var foundCells = new Dictionary<int, IList<int>>();
    407       for (int i = 0; i < Content.FilterLogic.PreprocessingData.Columns; i++) {
     407      for (int i = 0; i < Content.PreprocessingData.Columns; i++) {
    408408        var filters = CreateFilters(match, comparisonOperation, i);
    409409
    410         bool[] filteredRows = Content.FilterLogic.GetFilterResult(filters, true);
     410        bool[] filteredRows = GetFilterResult(filters, true);
    411411        var foundIndices = new List<int>();
    412412        for (int idx = 0; idx < filteredRows.Length; ++idx) {
    … …  
    427427    }
    428428
     429    private bool[] GetFilterResult(IList<IFilter> filters, bool isAndCombination) {
     430      IList<IFilter> activeFilters = filters.Where(f => f.Active && f.ConstraintData != null).ToList();
     431
     432      if (activeFilters.Count == 0) {
     433        return Enumerable.Repeat(false, Content.PreprocessingData.Rows).ToArray(); ;
     434      }
     435
     436      var result = Enumerable.Repeat(!isAndCombination, Content.PreprocessingData.Rows).ToArray();
     437      foreach (IFilter filter in activeFilters) {
     438        bool[] filterResult = filter.Check();
     439        for (int row = 0; row < result.Length; ++row) {
     440          result[row] = isAndCombination ? result[row] || filterResult[row] : result[row] && filterResult[row];
     441        }
     442      }
     443      return result;
     444    }
     445
    429446    private List<IFilter> CreateFilters(string match, ComparisonOperation comparisonOperation, int columnIndex) {
    430       IPreprocessingData preprocessingData = Content.FilterLogic.PreprocessingData;
     447      IPreprocessingData preprocessingData = Content.PreprocessingData;
    431448      IStringConvertibleValue value;
    432449      if (preprocessingData.VariableHasType<double>(columnIndex)) {
    … …  
    547564      base.dataGridView_KeyDown(sender, e);
    548565      //data is in read only mode....
    549       if (Content.FilterLogic.IsFiltered) return;
     566      if (Content.PreprocessingData.IsFiltered) return;
    550567
    551568      if (e.KeyCode == Keys.Delete) {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/DataPreprocessingView.cs

    r15269 r15274  
    4949      if (Content != null) {
    5050        var data = Content.Data;
    51         var filterLogic = new FilterLogic(data);
    5251        var statisticsLogic = new StatisticsLogic(data);
    5352        var manipulationLogic = new ManipulationLogic(data, statisticsLogic);
    5453
    5554        var viewShortcuts = new ItemList<IViewShortcut> {
    56           new DataGridContent(data, manipulationLogic, filterLogic),
     55          new DataGridContent(data, manipulationLogic),
    5756          new StatisticsContent(data, statisticsLogic),
    5857
    … …  
    6463          new DataCompletenessChartContent(data),
    6564
    66           new FilterContent(filterLogic),
    67           new ManipulationContent(manipulationLogic, filterLogic),
    68           new TransformationContent(data, filterLogic)
     65          new FilterContent(data),
     66          new ManipulationContent(data, manipulationLogic),
     67          new TransformationContent(data)
    6968        };
    7069

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/FilterView.cs

    r15110 r15274  
    7474      rBtnAnd.Enabled = (activeFilters > 0);
    7575      rBtnOr.Enabled = (activeFilters > 0);
    76       Content.FilterLogic.Reset();
    77       bool[] result = Content.FilterLogic.Preview(filters, rBtnAnd.Checked);
     76      Content.PreprocessingData.ResetFilter();
     77      bool isAndCombination = rBtnAnd.Checked;
     78      bool[] ret;
     79      IList<IFilter> activeFilters1 = filters.Where(f => f.Active && f.ConstraintData != null).ToList();
     80      if (activeFilters1.Count > 0) {
     81        var result1 = Enumerable.Repeat(!isAndCombination, Content.PreprocessingData.Rows).ToArray();
     82
     83        foreach (IFilter filter in activeFilters1) {
     84          bool[] filterResult = filter.Check();
     85          for (int row = 0; row < result1.Length; ++row) {
     86            result1[row] = isAndCombination ? result1[row] || filterResult[row] : result1[row] && filterResult[row];
     87          }
     88        }
     89        Content.PreprocessingData.SetFilter(result1);
     90        ret = result1;
     91      } else {
     92        ret = Enumerable.Repeat(false, Content.PreprocessingData.Rows).ToArray();
     93      }
     94      bool[] result = ret;
    7895
    7996      int filteredCnt = result.Count(c => !c);
    … …  
    89106        List<IFilter> filters = Content.Filters.ToList();
    90107        //apply filters
    91         Content.FilterLogic.Apply(filters, rBtnAnd.Checked);
     108        bool isAndCombination = rBtnAnd.Checked;
     109        Content.PreprocessingData.PersistFilter();
     110        Content.PreprocessingData.ResetFilter();
    92111        //deactivate checked filters
    93112        filters = checkedFilterView.Content.CheckedItems.ToList();
    … …  
    104123      if (Content != null) {
    105124        foreach (IFilter filter in e.Items) {
    106           filter.ConstrainedValue = Content.FilterLogic.PreprocessingData;
     125          filter.ConstrainedValue = Content.PreprocessingData;
    107126        }
    108127      }

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/ManipulationView.cs

    r15269 r15274  
    8383    protected override void RegisterContentEvents() {
    8484      base.RegisterContentEvents();
    85       Content.FilterLogic.FilterChanged += FilterLogic_FilterChanged;
     85      Content.ManipulationLogic.PreProcessingData.FilterChanged += FilterLogic_FilterChanged;
    8686    }
    8787
    8888    protected override void DeregisterContentEvents() {
    89       Content.FilterLogic.FilterChanged -= FilterLogic_FilterChanged;
     89      Content.ManipulationLogic.PreProcessingData.FilterChanged -= FilterLogic_FilterChanged;
    9090      base.DeregisterContentEvents();
    9191    }
    … …  
    9898
    9999    private void CheckFilters() {
    100       if (Content.FilterLogic.IsFiltered) {
     100      if (Content.PreprocessingData.IsFiltered) {
    101101        tabsPreview.SelectedIndex = 0;
    102102        lstMethods.Enabled = false;
    … …  
    159159        var filteredColumns = Content.ManipulationLogic.ColumnsWithMissingValuesGreater(GetDeleteColumnsInfo());
    160160        int count = filteredColumns.Count;
    161         int columnCount = Content.FilterLogic.PreprocessingData.Columns;
     161        int columnCount = Content.PreprocessingData.Columns;
    162162        lblPreviewColumnsInfo.Text = string.Format("{0} column{1} of {2} ({3}) were detected with more than {4}% missing values.", count, (count > 1 || count == 0 ? "s" : ""), columnCount, string.Format("{0:F2}%", 100d / columnCount * count), txtDeleteColumnsInfo.Text);
    163163
    … …  
    190190        var filteredColumns = Content.ManipulationLogic.ColumnsWithVarianceSmaller(GetDeleteColumnsVariance());
    191191        int count = filteredColumns.Count;
    192         int columnCount = Content.FilterLogic.PreprocessingData.Columns;
     192        int columnCount = Content.PreprocessingData.Columns;
    193193        lblPreviewColumnsVariance.Text = string.Format("{0} column{1} of {2} ({3}) were detected with a variance smaller than {4}.", count, (count > 1 || count == 0 ? "s" : ""), columnCount, string.Format("{0:F2}%", 100d / columnCount * count), txtDeleteColumnsVariance.Text);
    194194
    … …  
    220220      if (btnApply.Enabled) {
    221221        int count = Content.ManipulationLogic.RowsWithMissingValuesGreater(GetRowsColumnsInfo()).Count;
    222         int rowCount = Content.FilterLogic.PreprocessingData.Rows;
     222        int rowCount = Content.PreprocessingData.Rows;
    223223        lblPreviewRowsInfo.Text = count + " row" + (count > 1 || count == 0 ? "s" : "") + " of " + rowCount + " (" + string.Format("{0:F2}%", 100d / rowCount * count) + ") were detected with more than " + txtDeleteRowsInfo.Text + "% missing values.";
    224224        if (count > 0) {
    … …  
    256256          if (Content.ManipulationLogic.PreProcessingData.IsCellEmpty(columnIndex, rowIndex)) count++;
    257257
    258         int cellCount = Content.FilterLogic.PreprocessingData.Rows * Content.FilterLogic.PreprocessingData.Columns;
     258        int cellCount = Content.PreprocessingData.Rows * Content.PreprocessingData.Columns;
    259259        lblPreviewReplaceMissingValues.Text = count + " cell" + (count > 1 || count == 0 ? "s" : "")
    260260          + " of " + cellCount + " (" + string.Format("{0:F2}%", 100d / cellCount * count) + ") were detected with missing values which would be replaced with " + replaceWith;

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/StatisticsView.cs

    r15210 r15274  
    8888    private void UpdateData(Dictionary<string, bool> oldVisibility = null) {
    8989      var logic = Content.StatisticsLogic;
    90       rowsTextBox.Text = logic.GetRowCount().ToString();
    91       columnsTextBox.Text = logic.GetColumnCount().ToString();
    92       numericColumnsTextBox.Text = logic.GetNumericColumnCount().ToString();
    93       nominalColumnsTextBox5.Text = logic.GetNominalColumnCount().ToString();
     90      var data = Content.PreprocessingData;
     91      rowsTextBox.Text = data.Rows.ToString();
     92      columnsTextBox.Text = data.Rows.ToString();
     93      numericColumnsTextBox.Text = GetColumnCount<double>().ToString();
     94      nominalColumnsTextBox5.Text = GetColumnCount<string>().ToString();
    9495      missingValuesTextBox.Text = logic.GetMissingValueCount().ToString();
    95       totalValuesTextBox.Text = (logic.GetColumnCount() * logic.GetRowCount() - logic.GetMissingValueCount()).ToString();
     96      totalValuesTextBox.Text = (data.Rows * data.Rows - logic.GetMissingValueCount()).ToString();
    9697
    9798      var variableNames = Content.PreprocessingData.VariableNames.ToList();
    … …  
    107108        };
    108109
    109       for (int i = 0; i < logic.GetColumnCount(); i++) {
    110         var data = GetStatistics(i);
    111         for (int j = 0; j < data.Count; j++) {
     110      for (int i = 0; i < data.Columns; i++) {
     111        var statistics = GetStatistics(i);
     112        for (int j = 0; j < statistics.Count; j++) {
    112113          if (horizontal)
    113             statisticsMatrix[j, i] = data[j];
     114            statisticsMatrix[j, i] = statistics[j];
    114115          else
    115             statisticsMatrix[i, j] = data[j];
     116            statisticsMatrix[i, j] = statistics[j];
    116117        }
    117118      }
    … …  
    136137      stringMatrixView.DataGridView.AutoResizeColumns();
    137138      stringMatrixView.Parent.ResumeRepaint(true);
     139    }
     140
     141    public int GetColumnCount<T>() {
     142      int count = 0;
     143      for (int i = 0; i < Content.PreprocessingData.Columns; ++i) {
     144        if (Content.PreprocessingData.VariableHasType<T>(i)) {
     145          ++count;
     146        }
     147      }
     148      return count;
    138149    }
    139150

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing.Views/3.4/TransformationView.cs

    r15110 r15274  
    5151
    5252    protected override void RegisterContentEvents() {
    53       Content.FilterLogic.FilterChanged += FilterLogic_FilterChanged;
     53      Content.PreprocessingData.FilterChanged += FilterLogic_FilterChanged;
    5454    }
    5555
    5656    protected override void DeregisterContentEvents() {
    57       Content.FilterLogic.FilterChanged -= FilterLogic_FilterChanged;
     57      Content.PreprocessingData.FilterChanged -= FilterLogic_FilterChanged;
    5858    }
    5959
    … …  
    6565
    6666    private void CheckFilters() {
    67       if (Content.FilterLogic.IsFiltered) {
     67      if (Content.PreprocessingData.IsFiltered) {
    6868        applyButton.Enabled = false;
    6969        lblFilterNotice.Visible = true;
    … …  
    8282      }
    8383
    84       var transformator = new PreprocessingTransformator(Content.Data);
     84      var transformator = new PreprocessingTransformator(Content.PreprocessingData);
    8585      bool preserve = preserveColumnsCheckbox.CheckState == CheckState.Checked;
    8686      string errorMsg;

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/CorrelationMatrixContent.cs

    r15270 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526using HeuristicLab.Problems.DataAnalysis;
    2627
    2728namespace HeuristicLab.DataPreprocessing {
    2829  [Item("Feature Correlation Matrix", "Represents the feature correlation matrix.")]
    29   public class CorrelationMatrixContent : Item, IViewShortcut {
     30  [StorableClass]
     31  public class CorrelationMatrixContent : PreprocessingContent, IViewShortcut {
    3032    public static new Image StaticItemImage {
    3133      get { return HeuristicLab.Common.Resources.VSImageLibrary.Gradient; }
    3234    }
    3335
     36    [Storable]
    3437    public PreprocessingContext Context { get; private set; }
    35     public IPreprocessingData PreprocessingData {
    36       get { return Context.Data; }
    37     }
     38
    3839
    3940    public DataAnalysisProblemData ProblemData {
    … …  
    4748    }
    4849
    49     public CorrelationMatrixContent(PreprocessingContext context) {
     50    #region Constructor, Cloning & Persistence
     51    public CorrelationMatrixContent(PreprocessingContext context)
     52      : base(context.Data) {
    5053      Context = context;
    5154    }
    … …  
    5558      Context = original.Context;
    5659    }
    57 
    5860    public override IDeepCloneable Clone(Cloner cloner) {
    5961      return new CorrelationMatrixContent(this, cloner);
    6062    }
     63
     64    [StorableConstructor]
     65    protected CorrelationMatrixContent(bool deserializing)
     66      : base(deserializing) { }
     67    #endregion
    6168
    6269    public event DataPreprocessingChangedEventHandler Changed {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/DataCompletenessChartContent.cs

    r15270 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526
    2627namespace HeuristicLab.DataPreprocessing {
    2728  [Item("Data Completeness Chart", "Represents a datacompleteness chart.")]
    28 
    29   public class DataCompletenessChartContent : Item, IViewShortcut {
     29  [StorableClass]
     30  public class DataCompletenessChartContent : PreprocessingContent, IViewShortcut {
    3031    public static new Image StaticItemImage {
    3132      get { return HeuristicLab.Common.Resources.VSImageLibrary.EditBrightnessContrast; }
    3233    }
    3334
    34     public IPreprocessingData PreprocessingData { get; private set; }
    35 
    36     public DataCompletenessChartContent(IPreprocessingData preprocessingData) {
    37       PreprocessingData = preprocessingData;
     35    #region Constructor, Cloning & Persistence
     36    public DataCompletenessChartContent(IFilteredPreprocessingData preprocessingData)
     37      : base(preprocessingData) {
    3838    }
    3939
    4040    public DataCompletenessChartContent(DataCompletenessChartContent content, Cloner cloner)
    4141      : base(content, cloner) {
    42       PreprocessingData = content.PreprocessingData;
    4342    }
    44 
    4543    public override IDeepCloneable Clone(Cloner cloner) {
    4644      return new DataCompletenessChartContent(this, cloner);
    4745    }
     46
     47    [StorableConstructor]
     48    protected DataCompletenessChartContent(bool deserializing)
     49      : base(deserializing) { }
     50    #endregion
    4851  }
    4952}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/DataGridContent.cs

    r15270 r15274  
    2727using HeuristicLab.Core;
    2828using HeuristicLab.Data;
     29using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2930
    3031namespace HeuristicLab.DataPreprocessing {
    31 
    3232  [Item("Data Grid", "Represents a data grid.")]
    33   public class DataGridContent : Item, IStringConvertibleMatrix, IViewShortcut {
     33  [StorableClass]
     34  public class DataGridContent : PreprocessingContent, IStringConvertibleMatrix, IViewShortcut {
    3435    public static new Image StaticItemImage {
    3536      get { return HeuristicLab.Common.Resources.VSImageLibrary.Table; }
    3637    }
    3738
    38     public IPreprocessingData PreprocessingData { get; private set; }
    39 
     39    [Storable]
    4040    public ManipulationLogic ManipulationLogic { get; private set; }
    41     public FilterLogic FilterLogic { get; private set; }
    4241
    4342    public int Rows {
    … …  
    7574    }
    7675
    77     public DataGridContent(IPreprocessingData preprocessingData, ManipulationLogic theManipulationLogic, FilterLogic theFilterLogic) {
    78       ManipulationLogic = theManipulationLogic;
    79       FilterLogic = theFilterLogic;
    80       PreprocessingData = preprocessingData;
     76    #region Constructor, Cloning & Persistence
     77    public DataGridContent(IFilteredPreprocessingData preprocessingData, ManipulationLogic manipulationLogic)
     78      : base(preprocessingData) {
     79      ManipulationLogic = manipulationLogic;
    8180    }
    8281
    83     public DataGridContent(DataGridContent dataGridContent, Cloner cloner)
    84       : base(dataGridContent, cloner) {
    85 
     82    public DataGridContent(DataGridContent original, Cloner cloner)
     83      : base(original, cloner) {
     84      ManipulationLogic = cloner.Clone(original.ManipulationLogic);
    8685    }
    8786    public override IDeepCloneable Clone(Cloner cloner) {
    8887      return new DataGridContent(this, cloner);
    8988    }
     89
     90    [StorableConstructor]
     91    protected DataGridContent(bool deserializing)
     92      : base(deserializing) { }
     93    #endregion
    9094
    9195    public void DeleteRows(IEnumerable<int> rows) {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/FilterContent.cs

    r15110 r15274  
    2424using HeuristicLab.Core;
    2525using HeuristicLab.DataPreprocessing.Filter;
     26using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2627
    2728namespace HeuristicLab.DataPreprocessing {
    2829  [Item("Filter", "Represents the filter grid.")]
    29   public class FilterContent : Item, IViewShortcut {
     30  [StorableClass]
     31  public class FilterContent : PreprocessingContent, IViewShortcut {
    3032    public static new Image StaticItemImage {
    3133      get { return HeuristicLab.Common.Resources.VSImageLibrary.Filter; }
    3234    }
    33 
    34     public FilterLogic FilterLogic { get; private set; }
    35 
     35    [Storable]
    3636    public ICheckedItemCollection<IFilter> Filters { get; private set; }
    3737
     38    [Storable]
    3839    public bool IsAndCombination { get; set; }
    3940
    40     public FilterContent(FilterLogic filterLogic) {
     41    #region Constructor, Cloning & Persistence
     42    public FilterContent(IFilteredPreprocessingData preprocessingData)
     43      : base(preprocessingData) {
    4144      Filters = new CheckedItemCollection<IFilter>();
    4245      IsAndCombination = true;
    43       FilterLogic = filterLogic;
    4446    }
    4547
    46     protected FilterContent(FilterContent content, Cloner cloner)
    47       : base(content, cloner) {
     48    protected FilterContent(FilterContent original, Cloner cloner)
     49      : base(original, cloner) {
     50      Filters = cloner.Clone(original.Filters);
     51      IsAndCombination = original.IsAndCombination;
    4852    }
    49 
    5053    public override IDeepCloneable Clone(Cloner cloner) {
    5154      return new FilterContent(this, cloner);
    5255    }
     56
     57    [StorableConstructor]
     58    protected FilterContent(bool deserializing)
     59      : base(deserializing) { }
     60    #endregion
    5361  }
    5462}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/HistogramContent.cs

    r15210 r15274  
    2626using HeuristicLab.Common;
    2727using HeuristicLab.Core;
     28using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2829
    2930namespace HeuristicLab.DataPreprocessing {
    3031  [Item("Histogram", "Represents the histogram grid.")]
     32  [StorableClass]
    3133  public class HistogramContent : PreprocessingChartContent {
    3234    public static new Image StaticItemImage {
    … …  
    3436    }
    3537
     38    [Storable]
    3639    public string GroupingVariableName { get; set; }
    3740
     41    [Storable]
    3842    public int Bins { get; set; }
     43    [Storable]
    3944    public bool ExactBins { get; set; }
    4045
     46    [Storable]
    4147    public LegendOrder Order { get; set; }
    4248
     49    #region Constructor, Cloning & Persistence
    4350    public HistogramContent(IFilteredPreprocessingData preprocessingData)
    4451      : base(preprocessingData) {
    … …  
    4754    }
    4855
    49     public HistogramContent(HistogramContent content, Cloner cloner)
    50       : base(content, cloner) {
     56    public HistogramContent(HistogramContent original, Cloner cloner)
     57      : base(original, cloner) {
     58      GroupingVariableName = original.GroupingVariableName;
     59      Bins = original.Bins;
     60      ExactBins = original.ExactBins;
     61      Order = original.Order;
    5162    }
    5263    public override IDeepCloneable Clone(Cloner cloner) {
    5364      return new HistogramContent(this, cloner);
    5465    }
     66
     67    [StorableConstructor]
     68    protected HistogramContent(bool deserializing)
     69      : base(deserializing) { }
     70    #endregion
    5571
    5672    public static DataTable CreateHistogram(IFilteredPreprocessingData preprocessingData, string variableName, string groupingVariableName, DataTableVisualProperties.DataTableHistogramAggregation aggregation, LegendOrder legendOrder = LegendOrder.Alphabetically) {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/LineChartContent.cs

    r15110 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526
    2627namespace HeuristicLab.DataPreprocessing {
    27 
    2828  [Item("Line Chart", "Represents the line chart grid.")]
     29  [StorableClass]
    2930  public class LineChartContent : PreprocessingChartContent {
    30     public bool AllInOneMode { get; set; }
    31 
    3231    public static new Image StaticItemImage {
    3332      get { return HeuristicLab.Common.Resources.VSImageLibrary.Performance; }
    3433    }
    3534
     35    [Storable]
     36    public bool AllInOneMode { get; set; }
     37
     38
     39    #region Constructor, Cloning & Persistence
    3640    public LineChartContent(IFilteredPreprocessingData preprocessingData)
    3741      : base(preprocessingData) {
    … …  
    3943    }
    4044
    41     public LineChartContent(LineChartContent content, Cloner cloner)
    42       : base(content, cloner) {
    43       this.AllInOneMode = content.AllInOneMode;
     45    public LineChartContent(LineChartContent original, Cloner cloner)
     46      : base(original, cloner) {
     47      AllInOneMode = original.AllInOneMode;
    4448    }
    4549    public override IDeepCloneable Clone(Cloner cloner) {
    4650      return new LineChartContent(this, cloner);
    4751    }
     52
     53    [StorableConstructor]
     54    protected LineChartContent(bool deserializing)
     55      : base(deserializing) { }
     56    #endregion
    4857  }
    4958}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/ManipulationContent.cs

    r15269 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526
    2627namespace HeuristicLab.DataPreprocessing {
    27 
    2828  [Item("Manipulation", "Represents the available manipulations on a data set.")]
    29   public class ManipulationContent : Item, IViewShortcut {
     29  [StorableClass]
     30  public class ManipulationContent : PreprocessingContent, IViewShortcut {
    3031    public static new Image StaticItemImage {
    3132      get { return HeuristicLab.Common.Resources.VSImageLibrary.Method; }
    3233    }
    3334
     35    [Storable]
    3436    public ManipulationLogic ManipulationLogic { get; private set; }
    35     public FilterLogic FilterLogic { get; private set; }
    3637
    37     public ManipulationContent(ManipulationLogic manipulationLogic, FilterLogic filterLogic) {
     38    #region Constructor, Cloning & Persistence
     39    public ManipulationContent(IFilteredPreprocessingData preprocessingData, ManipulationLogic manipulationLogic)
     40      : base(preprocessingData) {
    3841      ManipulationLogic = manipulationLogic;
    39       FilterLogic = filterLogic;
    4042    }
    4143
    42     public ManipulationContent(ManipulationContent content, Cloner cloner) : base(content, cloner) { }
    43 
     44    public ManipulationContent(ManipulationContent original, Cloner cloner) :
     45      base(original, cloner) {
     46      ManipulationLogic = cloner.Clone(original.ManipulationLogic);
     47    }
    4448    public override IDeepCloneable Clone(Cloner cloner) {
    4549      return new ManipulationContent(this, cloner);
    4650    }
     51
     52    [StorableConstructor]
     53    protected ManipulationContent(bool deserializing)
     54      : base(deserializing) { }
     55    #endregion
    4756  }
    4857}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/MultiScatterPlotContent.cs

    r15110 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526
    2627namespace HeuristicLab.DataPreprocessing {
    27 
    2828  [Item("Multi Scatter Plot", "Represents a multi scatter plot.")]
     29  [StorableClass]
    2930  public class MultiScatterPlotContent : ScatterPlotContent {
    3031    public static new Image StaticItemImage {
    … …  
    3233    }
    3334
     35    #region Constructor, Cloning & Persistence
    3436    public MultiScatterPlotContent(IFilteredPreprocessingData preprocessingData)
    3537      : base(preprocessingData) {
    3638    }
    3739
    38     public MultiScatterPlotContent(MultiScatterPlotContent content, Cloner cloner)
    39       : base(content, cloner) {
     40    public MultiScatterPlotContent(MultiScatterPlotContent original, Cloner cloner)
     41      : base(original, cloner) {
    4042    }
    41 
    4243    public override IDeepCloneable Clone(Cloner cloner) {
    4344      return new MultiScatterPlotContent(this, cloner);
    4445    }
     46
     47    [StorableConstructor]
     48    protected MultiScatterPlotContent(bool deserializing)
     49      : base(deserializing) { }
     50    #endregion
    4551  }
    4652}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/PreprocessingChartContent.cs

    r15210 r15274  
    2929using HeuristicLab.Core;
    3030using HeuristicLab.Data;
     31using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    3132
    3233namespace HeuristicLab.DataPreprocessing {
    3334  [Item("PreprocessingChart", "Represents a preprocessing chart.")]
    34   public class PreprocessingChartContent : Item, IViewShortcut {
     35  [StorableClass]
     36  public class PreprocessingChartContent : PreprocessingContent, IViewShortcut {
    3537    public enum LegendOrder {
    3638      Alphabetically,
    … …  
    4244    }
    4345
    44     private ICheckedItemList<StringValue> variableItemList = null;
     46    [Storable]
     47    private ICheckedItemList<StringValue> variableItemList;
    4548    public ICheckedItemList<StringValue> VariableItemList {
    4649      get {
    4750        if (variableItemList == null)
    4851          variableItemList = CreateVariableItemList(PreprocessingData);
    49         return this.variableItemList;
     52        return variableItemList;
    5053      }
    5154    }
    5255
    53     public IFilteredPreprocessingData PreprocessingData { get; private set; }
    5456    public event DataPreprocessingChangedEventHandler Changed {
    5557      add { PreprocessingData.Changed += value; }
    … …  
    5759    }
    5860
    59     public PreprocessingChartContent(IFilteredPreprocessingData preprocessingData) {
    60       PreprocessingData = preprocessingData;
     61    #region Constructor, Cloning & Persistence
     62    public PreprocessingChartContent(IFilteredPreprocessingData preprocessingData)
     63       : base(preprocessingData) {
    6164    }
    6265
    63     public PreprocessingChartContent(PreprocessingChartContent content, Cloner cloner)
    64       : base(content, cloner) {
    65       this.PreprocessingData = content.PreprocessingData;
    66       this.variableItemList = cloner.Clone<ICheckedItemList<StringValue>>(variableItemList);
     66    public PreprocessingChartContent(PreprocessingChartContent original, Cloner cloner)
     67      : base(original, cloner) {
     68      variableItemList = cloner.Clone(original.variableItemList);
    6769    }
    6870    public override IDeepCloneable Clone(Cloner cloner) {
    6971      return new PreprocessingChartContent(this, cloner);
    7072    }
     73
     74    [StorableConstructor]
     75    protected PreprocessingChartContent(bool deserializing)
     76      : base(deserializing) { }
     77    #endregion
    7178
    7279    public DataRow CreateDataRow(string variableName, DataRowVisualProperties.DataRowChartType chartType) {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/ScatterPlotContent.cs

    r15210 r15274  
    2525using HeuristicLab.Analysis;
    2626using HeuristicLab.Common;
     27using HeuristicLab.Core;
     28using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2729using HeuristicLab.Visualization.ChartControlsExtensions;
    2830
    2931namespace HeuristicLab.DataPreprocessing {
    30 
     32  [Item("ScatterPlotContent", "")]
     33  [StorableClass]
    3134  public abstract class ScatterPlotContent : PreprocessingChartContent {
     35    [Storable]
    3236    public string GroupingVariable { get; set; }
    3337
     38    #region Constructor, Cloning & Persistence
    3439    protected ScatterPlotContent(IFilteredPreprocessingData preprocessingData)
    3540      : base(preprocessingData) {
    3641    }
    3742
    38     protected ScatterPlotContent(ScatterPlotContent content, Cloner cloner)
    39       : base(content, cloner) {
     43    protected ScatterPlotContent(ScatterPlotContent original, Cloner cloner)
     44      : base(original, cloner) {
     45      GroupingVariable = original.GroupingVariable;
    4046    }
     47
     48    [StorableConstructor]
     49    protected ScatterPlotContent(bool deserializing)
     50      : base(deserializing) { }
     51    #endregion
    4152
    4253    public static ScatterPlot CreateScatterPlot(IFilteredPreprocessingData preprocessingData, string variableNameX, string variableNameY, string variableNameGroup = "-", LegendOrder legendOrder = LegendOrder.Alphabetically) {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/SingleScatterPlotContent.cs

    r15110 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526
    2627namespace HeuristicLab.DataPreprocessing {
    27 
    2828  [Item("Scatter Plot", "Represents a scatter plot.")]
     29  [StorableClass]
    2930  public class SingleScatterPlotContent : ScatterPlotContent {
    3031    public static new Image StaticItemImage {
    … …  
    3233    }
    3334
     35    [Storable]
    3436    public string SelectedXVariable { get; set; }
     37    [Storable]
    3538    public string SelectedYVariable { get; set; }
    3639
     40    #region Constructor, Cloning & Persistence
    3741    public SingleScatterPlotContent(IFilteredPreprocessingData preprocessingData)
    3842      : base(preprocessingData) {
    3943    }
    4044
    41     public SingleScatterPlotContent(SingleScatterPlotContent content, Cloner cloner)
    42       : base(content, cloner) {
    43       this.SelectedXVariable = content.SelectedXVariable;
    44       this.SelectedYVariable = content.SelectedYVariable;
    45       this.GroupingVariable = content.GroupingVariable;
     45    public SingleScatterPlotContent(SingleScatterPlotContent original, Cloner cloner)
     46      : base(original, cloner) {
     47      SelectedXVariable = original.SelectedXVariable;
     48      SelectedYVariable = original.SelectedYVariable;
    4649    }
    47 
    4850    public override IDeepCloneable Clone(Cloner cloner) {
    4951      return new SingleScatterPlotContent(this, cloner);
    5052    }
     53
     54    [StorableConstructor]
     55    protected SingleScatterPlotContent(bool deserializing)
     56      : base(deserializing) { }
     57    #endregion
    5158  }
    5259}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/StatisticsContent.cs

    r15270 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526
    2627namespace HeuristicLab.DataPreprocessing {
    2728  [Item("Statistics", "Represents the statistics grid.")]
    28   public class StatisticsContent : Item, IViewShortcut {
     29  [StorableClass]
     30  public class StatisticsContent : PreprocessingContent, IViewShortcut {
    2931    public static new Image StaticItemImage {
    3032      get { return HeuristicLab.Common.Resources.VSImageLibrary.Object; }
    3133    }
    3234
    33     public IPreprocessingData PreprocessingData { get; private set; }
     35    [Storable]
    3436    public StatisticsLogic StatisticsLogic { get; private set; }
    3537
    36     public StatisticsContent(IPreprocessingData preProcessingData, StatisticsLogic statisticsLogic) {
    37       PreprocessingData = preProcessingData;
     38    #region Constructor, Cloning & Persistence
     39    public StatisticsContent(IFilteredPreprocessingData preprocessingData, StatisticsLogic statisticsLogic)
     40      : base(preprocessingData) {
    3841      StatisticsLogic = statisticsLogic;
    3942    }
    4043
    41     public StatisticsContent(StatisticsContent content, Cloner cloner)
    42       : base(content, cloner) {
     44    public StatisticsContent(StatisticsContent original, Cloner cloner)
     45      : base(original, cloner) {
     46      StatisticsLogic = cloner.Clone(original.StatisticsLogic);
    4347    }
    44 
    4548    public override IDeepCloneable Clone(Cloner cloner) {
    4649      return new StatisticsContent(this, cloner);
    4750    }
     51
     52    [StorableConstructor]
     53    protected StatisticsContent(bool deserializing)
     54      : base(deserializing) { }
     55    #endregion
    4856
    4957    public event DataPreprocessingChangedEventHandler Changed {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Content/TransformationContent.cs

    r15110 r15274  
    2323using HeuristicLab.Common;
    2424using HeuristicLab.Core;
     25using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2526using HeuristicLab.Problems.DataAnalysis;
    2627
    2728namespace HeuristicLab.DataPreprocessing {
    2829  [Item("Transformation", "Represents the transformation grid.")]
    29   public class TransformationContent : Item, IViewShortcut {
     30  [StorableClass]
     31  public class TransformationContent : PreprocessingContent, IViewShortcut {
    3032    public static new Image StaticItemImage {
    3133      get { return HeuristicLab.Common.Resources.VSImageLibrary.Method; }
    3234    }
    3335
    34     public IPreprocessingData Data { get; private set; }
    35     public FilterLogic FilterLogic { get; private set; }
    36 
     36    [Storable]
    3737    public ICheckedItemList<ITransformation> CheckedTransformationList { get; private set; }
    3838
    39     public TransformationContent(IPreprocessingData data, FilterLogic filterLogic) {
    40       Data = data;
     39    #region Constructor, Cloning & Persistence
     40    public TransformationContent(IFilteredPreprocessingData preprocessingData)
     41      : base(preprocessingData) {
    4142      CheckedTransformationList = new CheckedItemList<ITransformation>();
    42       FilterLogic = filterLogic;
    4343    }
    4444
    4545    public TransformationContent(TransformationContent original, Cloner cloner)
    4646      : base(original, cloner) {
    47       Data = original.Data;
    48       CheckedTransformationList = new CheckedItemList<ITransformation>(original.CheckedTransformationList);
     47      CheckedTransformationList = cloner.Clone(original.CheckedTransformationList);
    4948    }
    50 
    5149    public override IDeepCloneable Clone(Cloner cloner) {
    5250      return new TransformationContent(this, cloner);
    5351    }
     52
     53    [StorableConstructor]
     54    protected TransformationContent(bool deserializing)
     55      : base(deserializing) { }
     56    #endregion
    5457  }
    5558}

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Data/FilteredPreprocessingData.cs

    r15270 r15274  
    4242    }
    4343
    44     #region Constructor, Cloning & Persistance
     44    #region Constructor, Cloning & Persistence
    4545    public FilteredPreprocessingData(IPreprocessingData preporcessingData)
    4646      : base() {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Data/PreprocessingData.cs

    r15270 r15274  
    4242    protected IList<string> variableNames;
    4343
    44     #region Constructor, Cloning & Persistance
     44    #region Constructor, Cloning & Persistence
    4545    public PreprocessingData(IDataAnalysisProblemData problemData)
    4646      : base() {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/HeuristicLab.DataPreprocessing-3.4.csproj

    r15270 r15274  
    119119  <ItemGroup>
    120120    <Compile Include="Content\MultiScatterPlotContent.cs" />
     121    <Compile Include="Content\PreprocessingContent.cs" />
    121122    <Compile Include="Content\SingleScatterPlotContent.cs" />
    122123    <Compile Include="Content\ScatterPlotContent.cs" />
    … …  
    135136    <Compile Include="Data\IPreprocessingData.cs" />
    136137    <Compile Include="Content\FilterContent.cs" />
    137     <Compile Include="Logic\FilterLogic.cs" />
    138138    <Compile Include="Content\HistogramContent.cs" />
    139139    <Compile Include="Content\LineChartContent.cs" />

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Logic/ManipulationLogic.cs

    r15270 r15274  
    2323using System.Collections.Generic;
    2424using System.Linq;
     25using HeuristicLab.Common;
     26using HeuristicLab.Core;
    2527using HeuristicLab.Data;
     28using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2629using HeuristicLab.Random;
    2730
    2831namespace HeuristicLab.DataPreprocessing {
    29   public class ManipulationLogic {
    30     private readonly IPreprocessingData preprocessingData;
     32  [Item("ManipulationLogic", "")]
     33  [StorableClass]
     34  public class ManipulationLogic : Item {
     35
     36    [Storable]
     37    private readonly IFilteredPreprocessingData preprocessingData;
     38
     39    [Storable]
    3140    private readonly StatisticsLogic statisticsLogic;
    3241
    … …  
    3544    }
    3645
    37     public IPreprocessingData PreProcessingData {
     46    public IFilteredPreprocessingData PreProcessingData {
    3847      get { return preprocessingData; }
    3948    }
    4049
    41     public ManipulationLogic(IPreprocessingData preprocessingData, StatisticsLogic theStatisticsLogic) {
     50    #region Constructor, Cloning & Persistence
     51    public ManipulationLogic(IFilteredPreprocessingData preprocessingData, StatisticsLogic theStatisticsLogic) {
    4252      this.preprocessingData = preprocessingData;
    4353      statisticsLogic = theStatisticsLogic;
    4454    }
     55    public ManipulationLogic(ManipulationLogic original, Cloner cloner)
     56      : base(original, cloner) {
     57      preprocessingData = cloner.Clone(original.preprocessingData);
     58      statisticsLogic = cloner.Clone(original.statisticsLogic);
     59    }
     60    public override IDeepCloneable Clone(Cloner cloner) {
     61      return new ManipulationLogic(this, cloner);
     62    }
     63
     64    [StorableConstructor]
     65    protected ManipulationLogic(bool deserializing)
     66      : base(deserializing) { }
     67    #endregion
    4568
    4669    public void ReplaceIndicesByValue<T>(int columnIndex, IEnumerable<int> rowIndices, T value) {
    … …  
    123146      for (int i = 0; i < count; ++i) {
    124147        if (start == int.MinValue) {
    125           start = indexOfPrevPresentValue(column.Key, rowIndices[i]);
     148          start = IndexOfPrevPresentValue(column.Key, rowIndices[i]);
    126149        }
    127150        if (i + 1 == count || (i + 1 < count && rowIndices[i + 1] - rowIndices[i] > 1)) {
    128           int next = indexOfNextPresentValue(column.Key, rowIndices[i]);
     151          int next = IndexOfNextPresentValue(column.Key, rowIndices[i]);
    129152          if (start > 0 && next < preprocessingData.Rows) {
    130153            startEndings.Add(new Tuple<int, int>(start, next));
    … …  
    144167            // dont replace first or last values
    145168            if (index > 0 && index < countValues) {
    146               int prevIndex = indexOfPrevPresentValue(column.Key, index);
    147               int nextIndex = indexOfNextPresentValue(column.Key, index);
     169              int prevIndex = IndexOfPrevPresentValue(column.Key, index);
     170              int nextIndex = IndexOfNextPresentValue(column.Key, index);
    148171
    149172              // no neighbours found
    … …  
    183206    }
    184207
    185     private int indexOfPrevPresentValue(int columnIndex, int start) {
     208    private int IndexOfPrevPresentValue(int columnIndex, int start) {
    186209      int offset = start - 1;
    187210      while (offset >= 0 && preprocessingData.IsCellEmpty(columnIndex, offset)) {
    … …  
    192215    }
    193216
    194     private int indexOfNextPresentValue(int columnIndex, int start) {
     217    private int IndexOfNextPresentValue(int columnIndex, int start) {
    195218      int offset = start + 1;
    196219      while (offset < preprocessingData.Rows && preprocessingData.IsCellEmpty(columnIndex, offset)) {

  • branches/DataPreprocessing Cleanup/HeuristicLab.DataPreprocessing/3.4/Logic/StatisticsLogic.cs

    r15270 r15274  
    2424using System.Linq;
    2525using HeuristicLab.Common;
     26using HeuristicLab.Core;
     27using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    2628
    2729namespace HeuristicLab.DataPreprocessing {
    28   public class StatisticsLogic {
     30  [Item("StatisticsLogic", "")]
     31  [StorableClass]
     32  public class StatisticsLogic : Item {
     33    [Storable]
    2934    private readonly IPreprocessingData preprocessingData;
    3035
     36    #region Constructor, Cloning & Persistence
    3137    public StatisticsLogic(IPreprocessingData preprocessingData) {
    3238      this.preprocessingData = preprocessingData;
    3339    }
    34 
    35     public int GetColumnCount() {
    36       return preprocessingData.Columns;
    37     }
    38 
    39     public int GetRowCount() {
    40       return preprocessingData.Rows;
    41     }
    42 
    43     public int GetNumericColumnCount() {
    44       int count = 0;
    45 
    46       for (int i = 0; i < preprocessingData.Columns; ++i) {
    47         if (preprocessingData.VariableHasType<double>(i)) {
    48           ++count;
    49         }
    50       }
    51       return count;
    52     }
    53 
    54     public int GetNominalColumnCount() {
    55       return preprocessingData.Columns - GetNumericColumnCount();
    56     }
     40    public StatisticsLogic(StatisticsLogic original, Cloner cloner)
     41      : base(original, cloner) {
     42      preprocessingData = cloner.Clone(original.preprocessingData);
     43    }
     44    public override IDeepCloneable Clone(Cloner cloner) {
     45      return new StatisticsLogic(this, cloner);
     46    }
     47
     48    [StorableConstructor]
     49    protected StatisticsLogic(bool deserializing)
     50      : base(deserializing) { }
     51    #endregion
    5752
    5853    public int GetMissingValueCount() {
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