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HeuristicLab.Encodings.SymbolicExpressionTreeEncoding

Timestamp:

03/03/17 11:41:43 (8 years ago)

Author:

gkronber

Message:

#2520

renamed StorableClass -> StorableType
changed persistence to use GUIDs instead of type names

Location:

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4

Files:

: 50 edited

Analyzers/BestSymbolicExpressionTreeAnalyzer.cs (modified) (1 diff)
Analyzers/MinAverageMaxSymbolicExpressionTreeLengthAnalyzer.cs (modified) (1 diff)
Analyzers/SymbolicExpressionSymbolFrequencyAnalyzer.cs (modified) (1 diff)
Analyzers/SymbolicExpressionTreeLengthAnalyzer.cs (modified) (1 diff)
Analyzers/SymbolicExpressionTreeLengthCalculator.cs (modified) (1 diff)
ArchitectureManipulators/ArgumentCreater.cs (modified) (1 diff)
ArchitectureManipulators/ArgumentDeleter.cs (modified) (1 diff)
ArchitectureManipulators/ArgumentDuplicater.cs (modified) (1 diff)
ArchitectureManipulators/MultiSymbolicExpressionTreeArchitectureManipulator.cs (modified) (1 diff)
ArchitectureManipulators/SubroutineCreater.cs (modified) (1 diff)
ArchitectureManipulators/SubroutineDeleter.cs (modified) (1 diff)
ArchitectureManipulators/SubroutineDuplicater.cs (modified) (1 diff)
ArchitectureManipulators/SymbolicExpressionTreeArchitectureManipulator.cs (modified) (1 diff)
Creators/FullTreeCreator.cs (modified) (1 diff)
Creators/GrowTreeCreator.cs (modified) (1 diff)
Creators/ProbabilisticTreeCreator.cs (modified) (1 diff)
Creators/RampedHalfAndHalfTreeCreator.cs (modified) (1 diff)
Creators/SymbolicExpressionTreeCreator.cs (modified) (1 diff)
Crossovers/SubtreeCrossover.cs (modified) (1 diff)
Crossovers/SymbolicExpressionTreeCrossover.cs (modified) (1 diff)
Formatters/SymbolicExpressionTreeStringFormatter.cs (modified) (1 diff)
Grammars/EmptySymbolicExpressionTreeGrammar.cs (modified) (1 diff)
Grammars/SymbolicExpressionGrammar.cs (modified) (1 diff)
Grammars/SymbolicExpressionGrammarBase.cs (modified) (1 diff)
Grammars/SymbolicExpressionTreeGrammar.cs (modified) (1 diff)
Manipulators/ChangeNodeTypeManipulation.cs (modified) (1 diff)
Manipulators/FullTreeShaker.cs (modified) (1 diff)
Manipulators/MultiSymbolicExpressionTreeManipulator.cs (modified) (1 diff)
Manipulators/OnePointShaker.cs (modified) (1 diff)
Manipulators/RemoveBranchManipulation.cs (modified) (1 diff)
Manipulators/ReplaceBranchManipulation.cs (modified) (1 diff)
Manipulators/SymbolicExpressionTreeManipulator.cs (modified) (1 diff)
SymbolicExpressionTree.cs (modified) (1 diff)
SymbolicExpressionTreeEncoding.cs (modified) (1 diff)
SymbolicExpressionTreeNode.cs (modified) (1 diff)
SymbolicExpressionTreeOperator.cs (modified) (1 diff)
SymbolicExpressionTreeProblem.cs (modified) (1 diff)
SymbolicExpressionTreeTerminalNode.cs (modified) (1 diff)
SymbolicExpressionTreeTopLevelNode.cs (modified) (1 diff)
Symbols/Argument.cs (modified) (1 diff)
Symbols/ArgumentTreeNode.cs (modified) (1 diff)
Symbols/Defun.cs (modified) (1 diff)
Symbols/DefunTreeNode.cs (modified) (1 diff)
Symbols/GroupSymbol.cs (modified) (1 diff)
Symbols/InvokeFunction.cs (modified) (1 diff)
Symbols/InvokeFunctionTreeNode.cs (modified) (1 diff)
Symbols/ProgramRootSymbol.cs (modified) (1 diff)
Symbols/SimpleSymbol.cs (modified) (1 diff)
Symbols/StartSymbol.cs (modified) (1 diff)
Symbols/Symbol.cs (modified) (1 diff)

Legend:

: Unmodified
: Added
: Removed

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Analyzers/BestSymbolicExpressionTreeAnalyzer.cs

r13368	r14711
34	34	/// </summary>
35	35	[Item("BestSymbolicExpressionTreeAnalyzer", "An operator that tracks the best symbolic expression trees")]
36		[Storable~~Class~~("77EF082A-E935-469F-AFEC-89281617DEAC")]
	36	[StorableType("77EF082A-E935-469F-AFEC-89281617DEAC")]
37	37	[NonDiscoverableType]
38	38	public sealed class BestSymbolicExpressionTreeAnalyzer : SingleSuccessorOperator, ISymbolicExpressionTreeAnalyzer {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Analyzers/MinAverageMaxSymbolicExpressionTreeLengthAnalyzer.cs

r13368	r14711
34	34	/// </summary>
35	35	[Item("MinAverageMaxSymbolicExpressionTreeLengthAnalyzer", "An operator that tracks the min avgerage and max length of symbolic expression trees.")]
36		[Storable~~Class~~("78C42A89-E955-45E5-9659-97BE0433459F")]
	36	[StorableType("78C42A89-E955-45E5-9659-97BE0433459F")]
37	37	public sealed class MinAverageMaxSymbolicExpressionTreeLengthAnalyzer : AlgorithmOperator, ISymbolicExpressionTreeAnalyzer {
38	38	private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Analyzers/SymbolicExpressionSymbolFrequencyAnalyzer.cs

r13368	r14711
37	37	/// </summary>
38	38	[Item("SymbolicExpressionSymbolFrequencyAnalyzer", "An operator that tracks frequencies of symbols in symbolic expression trees.")]
39		[Storable~~Class~~("29CBFC73-BB85-4583-B18C-5632F2D46004")]
	39	[StorableType("29CBFC73-BB85-4583-B18C-5632F2D46004")]
40	40	public class SymbolicExpressionSymbolFrequencyAnalyzer : SingleSuccessorOperator, ISymbolicExpressionTreeAnalyzer {
41	41	private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Analyzers/SymbolicExpressionTreeLengthAnalyzer.cs

r13368	r14711
36	36	/// </summary>
37	37	[Item("SymbolicExpressionTreeLengthAnalyzer", "An operator that tracks tree lengths of Symbolic Expression Trees")]
38		[Storable~~Class~~("A3703E37-BBD8-4034-BB8F-DE12F8125A4C")]
	38	[StorableType("A3703E37-BBD8-4034-BB8F-DE12F8125A4C")]
39	39	public sealed class SymbolicExpressionTreeLengthAnalyzer : SingleSuccessorOperator, ISymbolicExpressionTreeAnalyzer {
40	40	private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Analyzers/SymbolicExpressionTreeLengthCalculator.cs

r13368	r14711
32	32	/// </summary>
33	33	[Item("SymbolicExpressionTreeLengthCalculator", "An operator that outputs the length of a symbolic expression tree.")]
34		[Storable~~Class~~("45E1620F-CDAC-4147-B780-A3B69BEEE06F")]
	34	[StorableType("45E1620F-CDAC-4147-B780-A3B69BEEE06F")]
35	35	public sealed class SymbolicExpressionTreeLengthCalculator : SingleSuccessorOperator {
36	36	private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/ArgumentCreater.cs

r13368	r14711
36	36	/// </summary>
37	37	[Item("ArgumentCreater", "Manipulates a symbolic expression by creating a new argument within one function-defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 106")]
38		[Storable~~Class~~("26EF2B78-709D-4479-92AF-56BC5757459E")]
	38	[StorableType("26EF2B78-709D-4479-92AF-56BC5757459E")]
39	39	public sealed class ArgumentCreater : SymbolicExpressionTreeArchitectureManipulator, ISymbolicExpressionTreeSizeConstraintOperator {
40	40	private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/ArgumentDeleter.cs

r13368	r14711
32	32	/// </summary>
33	33	[Item("ArgumentDeleter", "Manipulates a symbolic expression by deleting an argument from an existing function defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 112")]
34		[Storable~~Class~~("8B477E92-C6E9-4E7F-B5FC-6214C3585150")]
	34	[StorableType("8B477E92-C6E9-4E7F-B5FC-6214C3585150")]
35	35	public sealed class ArgumentDeleter : SymbolicExpressionTreeArchitectureManipulator {
36	36	[StorableConstructor]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/ArgumentDuplicater.cs

r13368	r14711
35	35	/// </summary>
36	36	[Item("ArgumentDuplicater", "Manipulates a symbolic expression by duplicating an existing argument node of a function-defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 94")]
37		[Storable~~Class~~("2FADF12E-75D7-4FE8-9A9F-4CA8A320C642")]
	37	[StorableType("2FADF12E-75D7-4FE8-9A9F-4CA8A320C642")]
38	38	public sealed class ArgumentDuplicater : SymbolicExpressionTreeArchitectureManipulator {
39	39	[StorableConstructor]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/MultiSymbolicExpressionTreeArchitectureManipulator.cs

r13368	r14711
35	35	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
36	36	[Item("MultiSymbolicExpressionTreeArchitectureManipulator", "Randomly selects and applies one of its architecture manipulators every time it is called.")]
37		[Storable~~Class~~("6D8D1160-7828-4F30-A80F-ECF37D0BF541")]
	37	[StorableType("6D8D1160-7828-4F30-A80F-ECF37D0BF541")]
38	38	public sealed class MultiSymbolicExpressionTreeArchitectureManipulator : StochasticMultiBranch<ISymbolicExpressionTreeManipulator>,
39	39	ISymbolicExpressionTreeArchitectureManipulator,

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/SubroutineCreater.cs

r13368	r14711
38	38	/// </summary>
39	39	[Item("SubroutineCreater", "Manipulates a symbolic expression by adding one new function-defining branch containing a proportion of a preexisting branch and by creating a reference to the new branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 97")]
40		[Storable~~Class~~("A9B4E7A6-45DB-404B-BE59-10F60DE70109")]
	40	[StorableType("A9B4E7A6-45DB-404B-BE59-10F60DE70109")]
41	41	public sealed class SubroutineCreater : SymbolicExpressionTreeArchitectureManipulator, ISymbolicExpressionTreeSizeConstraintOperator {
42	42	private const double ARGUMENT_CUTOFF_PROBABILITY = 0.05;

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/SubroutineDeleter.cs

r13368	r14711
34	34	/// </summary>
35	35	[Item("SubroutineDeleter", "Manipulates a symbolic expression by deleting a preexisting function-defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 108")]
36		[Storable~~Class~~("E2DE0C38-392B-4393-A652-7C098B24F41D")]
	36	[StorableType("E2DE0C38-392B-4393-A652-7C098B24F41D")]
37	37	public sealed class SubroutineDeleter : SymbolicExpressionTreeArchitectureManipulator {
38	38	[StorableConstructor]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/SubroutineDuplicater.cs

r13368	r14711
36	36	/// </summary>
37	37	[Item("SubroutineDuplicater", "Manipulates a symbolic expression by duplicating a preexisting function-defining branch. As described in Koza, Bennett, Andre, Keane, Genetic Programming III - Darwinian Invention and Problem Solving, 1999, pp. 88")]
38		[Storable~~Class~~("BB252B8E-EF9A-48A1-A3EF-1A334DE66887")]
	38	[StorableType("BB252B8E-EF9A-48A1-A3EF-1A334DE66887")]
39	39	public sealed class SubroutineDuplicater : SymbolicExpressionTreeArchitectureManipulator {
40	40	[StorableConstructor]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/ArchitectureManipulators/SymbolicExpressionTreeArchitectureManipulator.cs

r13368	r14711
30	30	/// Base class for architecture altering operators for symbolic expression trees.
31	31	/// </summary>
32		[Storable~~Class~~("0BD064C6-FBEF-4681-9EBD-2D2737ED0540")]
	32	[StorableType("0BD064C6-FBEF-4681-9EBD-2D2737ED0540")]
33	33	public abstract class SymbolicExpressionTreeArchitectureManipulator : SymbolicExpressionTreeManipulator, ISymbolicExpressionTreeArchitectureManipulator {
34	34	private const string MaximumFunctionArgumentsParameterName = "MaximumFunctionArguments";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/FullTreeCreator.cs

r13368	r14711
29	29	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
30	30	[NonDiscoverableType]
31		[Storable~~Class~~("924958FB-7A65-4432-8334-0AB6CE4DA37C")]
	31	[StorableType("924958FB-7A65-4432-8334-0AB6CE4DA37C")]
32	32	[Item("FullTreeCreator", "An operator that creates new symbolic expression trees using the 'Full' method")]
33	33	public class FullTreeCreator : SymbolicExpressionTreeCreator,

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/GrowTreeCreator.cs

r13368	r14711
29	29	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
30	30	[NonDiscoverableType]
31		[Storable~~Class~~("F117AE18-7FFC-4AD7-9493-FB0E54E17D19")]
	31	[StorableType("F117AE18-7FFC-4AD7-9493-FB0E54E17D19")]
32	32	[Item("GrowTreeCreator", "An operator that creates new symbolic expression trees using the 'Grow' method")]
33	33	public class GrowTreeCreator : SymbolicExpressionTreeCreator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/ProbabilisticTreeCreator.cs

r13368	r14711
30	30	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
31	31	[NonDiscoverableType]
32		[Storable~~Class~~("5064E89B-6B43-4CD3-A15F-7CBD66CBDFCB")]
	32	[StorableType("5064E89B-6B43-4CD3-A15F-7CBD66CBDFCB")]
33	33	[Item("ProbabilisticTreeCreator", "An operator that creates new symbolic expression trees with uniformly distributed length")]
34	34	public class ProbabilisticTreeCreator : SymbolicExpressionTreeCreator,

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/RampedHalfAndHalfTreeCreator.cs

r13368	r14711
27	27	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
28	28	[NonDiscoverableType]
29		[Storable~~Class~~("7280D0A0-94B1-4C14-A377-58735B3CB6EF")]
	29	[StorableType("7280D0A0-94B1-4C14-A377-58735B3CB6EF")]
30	30	[Item("RampedHalfAndHalfTreeCreator", "An operator that creates new symbolic expression trees in an alternate way: half the trees are created usign the 'Grow' method while the other half are created using the 'Full' method")]
31	31	public class RampedHalfAndHalfTreeCreator : SymbolicExpressionTreeCreator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Creators/SymbolicExpressionTreeCreator.cs

r13368	r14711
31	31	/// </summary>
32	32	[Item("SymbolicExpressionTreeCreator", "A base class for operators creating symbolic expression trees.")]
33		[Storable~~Class~~("9DF00734-B692-4211-BFD2-57A93F1C47FC")]
	33	[StorableType("9DF00734-B692-4211-BFD2-57A93F1C47FC")]
34	34	public abstract class SymbolicExpressionTreeCreator : SymbolicExpressionTreeOperator, ISymbolicExpressionTreeCreator {
35	35	private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Crossovers/SubtreeCrossover.cs

r13368	r14711
38	38	/// </summary>
39	39	[Item("SubtreeSwappingCrossover", "An operator which performs subtree swapping crossover.")]
40		[Storable~~Class~~("5C8CC819-EF4E-4856-AC27-B3F83A5F4157")]
	40	[StorableType("5C8CC819-EF4E-4856-AC27-B3F83A5F4157")]
41	41	public class SubtreeCrossover : SymbolicExpressionTreeCrossover, ISymbolicExpressionTreeSizeConstraintOperator {
42	42	private const string InternalCrossoverPointProbabilityParameterName = "InternalCrossoverPointProbability";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Crossovers/SymbolicExpressionTreeCrossover.cs

r13368	r14711
31	31	/// </summary>
32	32	[Item("SymbolicExpressionTreeCrossover", "A base class for operators that perform a crossover of symbolic expression trees.")]
33		[Storable~~Class~~("58188627-960A-4212-B991-53103F51920E")]
	33	[StorableType("58188627-960A-4212-B991-53103F51920E")]
34	34	public abstract class SymbolicExpressionTreeCrossover : SymbolicExpressionTreeOperator, ISymbolicExpressionTreeCrossover {
35	35	private const string ParentsParameterName = "Parents";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Formatters/SymbolicExpressionTreeStringFormatter.cs

r13368	r14711
29	29
30	30	[Item("Default String Formatter", "The default string formatter for symbolic expression trees.")]
31		[Storable~~Class~~("993E2D02-367E-4D39-806A-46A26893AEEC")]
	31	[StorableType("993E2D02-367E-4D39-806A-46A26893AEEC")]
32	32	public class SymbolicExpressionTreeStringFormatter : NamedItem, ISymbolicExpressionTreeStringFormatter {
33	33

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Grammars/EmptySymbolicExpressionTreeGrammar.cs

r13368	r14711
31	31	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
32	32
33		[Storable~~Class~~("AA88A816-9333-4E62-90FC-C27A70045844")]
	33	[StorableType("AA88A816-9333-4E62-90FC-C27A70045844")]
34	34	internal sealed class EmptySymbolicExpressionTreeGrammar : NamedItem, ISymbolicExpressionTreeGrammar {
35	35	[Storable]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Grammars/SymbolicExpressionGrammar.cs

r13368	r14711
29	29
30	30	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
31		[Storable~~Class~~("FE619EED-DFCE-454C-A395-CB426C87DFF9")]
	31	[StorableType("FE619EED-DFCE-454C-A395-CB426C87DFF9")]
32	32	public abstract class SymbolicExpressionGrammar : SymbolicExpressionGrammarBase, ISymbolicExpressionGrammar {
33	33	#region fields & properties

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Grammars/SymbolicExpressionGrammarBase.cs

r13368	r14711
34	34	/// in the sub-trees of a symbol (can be specified for each sub-tree index separately).
35	35	/// </summary>
36		[Storable~~Class~~("2E0A220E-3C30-4CEB-8DB4-0C1D07A0E7B0")]
	36	[StorableType("2E0A220E-3C30-4CEB-8DB4-0C1D07A0E7B0")]
37	37	public abstract class SymbolicExpressionGrammarBase : NamedItem, ISymbolicExpressionGrammarBase {
38	38

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Grammars/SymbolicExpressionTreeGrammar.cs

r13368	r14711
26	26
27	27	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
28		[Storable~~Class~~("E02370BD-3185-46B2-B71C-ABB0D6CB4D4B")]
	28	[StorableType("E02370BD-3185-46B2-B71C-ABB0D6CB4D4B")]
29	29	internal sealed class SymbolicExpressionTreeGrammar : SymbolicExpressionGrammarBase, ISymbolicExpressionTreeGrammar {
30	30	[StorableConstructor]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/ChangeNodeTypeManipulation.cs

r13368	r14711
27	27
28	28	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
29		[Storable~~Class~~("2665ED7B-793B-460A-AA62-4A6D07B3ECBC")]
	29	[StorableType("2665ED7B-793B-460A-AA62-4A6D07B3ECBC")]
30	30	[Item("ChangeNodeTypeManipulation", "Selects a random tree node and changes the symbol.")]
31	31	public sealed class ChangeNodeTypeManipulation : SymbolicExpressionTreeManipulator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/FullTreeShaker.cs

r13368	r14711
27	27
28	28	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
29		[Storable~~Class~~("A8D1485A-337D-495E-8B35-60E4A834C1B3")]
	29	[StorableType("A8D1485A-337D-495E-8B35-60E4A834C1B3")]
30	30	[Item("FullTreeShaker", "Manipulates all nodes that have local parameters.")]
31	31	public sealed class FullTreeShaker : SymbolicExpressionTreeManipulator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/MultiSymbolicExpressionTreeManipulator.cs

r13368	r14711
35	35	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
36	36	[Item("MultiSymbolicExpressionTreeManipulator", "Randomly selects and applies one of its manipulators every time it is called.")]
37		[Storable~~Class~~("0A07652C-42ED-4528-A0E4-9D27B4EAFE48")]
	37	[StorableType("0A07652C-42ED-4528-A0E4-9D27B4EAFE48")]
38	38	public sealed class MultiSymbolicExpressionTreeManipulator : StochasticMultiBranch<ISymbolicExpressionTreeManipulator>,
39	39	ISymbolicExpressionTreeManipulator,

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/OnePointShaker.cs

r13368	r14711
29	29
30	30	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
31		[Storable~~Class~~("51B4220A-465F-4F8C-98B5-23CFF11163DA")]
	31	[StorableType("51B4220A-465F-4F8C-98B5-23CFF11163DA")]
32	32	[Item("OnePointShaker", "Selects a random node with local parameters and manipulates the selected node.")]
33	33	public sealed class OnePointShaker : SymbolicExpressionTreeManipulator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/RemoveBranchManipulation.cs

r13368	r14711
30	30
31	31	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
32		[Storable~~Class~~("8C0986F0-9CA0-48CF-B7BF-55A83EC1E294")]
	32	[StorableType("8C0986F0-9CA0-48CF-B7BF-55A83EC1E294")]
33	33	[Item("RemoveBranchManipulation", "Removes a random sub-tree of the input tree and fixes the tree by generating random subtrees if necessary..")]
34	34	public sealed class RemoveBranchManipulation : SymbolicExpressionTreeManipulator, ISymbolicExpressionTreeSizeConstraintOperator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/ReplaceBranchManipulation.cs

r13368	r14711
29	29
30	30	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
31		[Storable~~Class~~("3FA624B1-3867-453C-B55D-5DD350F9034E")]
	31	[StorableType("3FA624B1-3867-453C-B55D-5DD350F9034E")]
32	32	[Item("ReplaceBranchManipulation", "Selects a branch of the tree randomly and replaces it with a newly initialized branch (using PTC2).")]
33	33	public sealed class ReplaceBranchManipulation : SymbolicExpressionTreeManipulator, ISymbolicExpressionTreeSizeConstraintOperator {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Manipulators/SymbolicExpressionTreeManipulator.cs

r13368	r14711
30	30	/// </summary>
31	31	[Item("SymbolicExpressionTreeManipulator", "A base class for operators that manipulate symbolic expression trees.")]
32		[Storable~~Class~~("441F5538-CA6C-4181-A452-C372FCD16D1E")]
	32	[StorableType("441F5538-CA6C-4181-A452-C372FCD16D1E")]
33	33	public abstract class SymbolicExpressionTreeManipulator : SymbolicExpressionTreeOperator, ISymbolicExpressionTreeManipulator {
34	34	[StorableConstructor]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTree.cs

r13368	r14711
29	29
30	30	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
31		[Storable~~Class~~("8788E193-A480-4505-BB37-0B9B87D64462")]
	31	[StorableType("8788E193-A480-4505-BB37-0B9B87D64462")]
32	32	[Item("SymbolicExpressionTree", "Represents a symbolic expression tree.")]
33	33	public class SymbolicExpressionTree : Item, ISymbolicExpressionTree {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeEncoding.cs

r13368	r14711
35	35	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
36	36	[Item("SymbolicExpressionTreeEncoding", "Describes a symbolic expression tree encoding.")]
37		[Storable~~Class~~("5DBBCE3B-6D46-4FCA-B753-01C78717425C")]
	37	[StorableType("5DBBCE3B-6D46-4FCA-B753-01C78717425C")]
38	38	public sealed class SymbolicExpressionTreeEncoding : Encoding<ISymbolicExpressionTreeCreator> {
39	39	#region Encoding Parameters

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeNode.cs

r13368	r14711
27	27
28	28	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
29		[Storable~~Class~~("0CFA069E-5751-4BD0-8F2F-E33FEF361AE6")]
	29	[StorableType("0CFA069E-5751-4BD0-8F2F-E33FEF361AE6")]
30	30	public class SymbolicExpressionTreeNode : DeepCloneable, ISymbolicExpressionTreeNode {
31	31	[Storable]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeOperator.cs

r13368	r14711
32	32	/// </summary>
33	33	[Item("SymbolicExpressionTreeOperator", "A base class for operators for symbolic expression trees.")]
34		[Storable~~Class~~("6952B05D-B28F-49A8-B931-6E51768EC4BC")]
	34	[StorableType("6952B05D-B28F-49A8-B931-6E51768EC4BC")]
35	35	public abstract class SymbolicExpressionTreeOperator : InstrumentedOperator, IStochasticOperator, ISymbolicExpressionTreeOperator {
36	36	private const string RandomParameterName = "Random";

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeProblem.cs

r13368	r14711
31	31
32	32	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
33		[Storable~~Class~~("38A95D7B-181E-42C7-92A0-321CDE469A7C")]
	33	[StorableType("38A95D7B-181E-42C7-92A0-321CDE469A7C")]
34	34	public abstract class SymbolicExpressionTreeProblem : SingleObjectiveBasicProblem<SymbolicExpressionTreeEncoding> {
35	35

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeTerminalNode.cs

r13368	r14711
27	27
28	28	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
29		[Storable~~Class~~("E707D970-CD63-4DB6-9ED1-D16D52716289")]
	29	[StorableType("E707D970-CD63-4DB6-9ED1-D16D52716289")]
30	30	public abstract class SymbolicExpressionTreeTerminalNode : SymbolicExpressionTreeNode {
31	31	public override IEnumerable<ISymbolicExpressionTreeNode> Subtrees {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/SymbolicExpressionTreeTopLevelNode.cs

r13368	r14711
24	24
25	25	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
26		[Storable~~Class~~("AB75AF95-BF33-46E0-8706-D978E1B413DF")]
	26	[StorableType("AB75AF95-BF33-46E0-8706-D978E1B413DF")]
27	27	public class SymbolicExpressionTreeTopLevelNode : SymbolicExpressionTreeNode {
28	28	[Storable]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/Argument.cs

r13368	r14711
27	27	/// Symbol for function arguments
28	28	/// </summary>
29		[Storable~~Class~~("367BF572-F29A-4DB1-97EE-0A51EEB89664")]
	29	[StorableType("367BF572-F29A-4DB1-97EE-0A51EEB89664")]
30	30	[Item(Argument.ArgumentName, Argument.ArgumentDescription)]
31	31	public sealed class Argument : Symbol, IReadOnlySymbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/ArgumentTreeNode.cs

r13368	r14711
24	24	using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
25	25	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
26		[Storable~~Class~~("3183170A-CEBF-4926-8EFB-0ED8AC711A87")]
	26	[StorableType("3183170A-CEBF-4926-8EFB-0ED8AC711A87")]
27	27	public sealed class ArgumentTreeNode : SymbolicExpressionTreeTerminalNode {
28	28	internal new Argument Symbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/Defun.cs

r13368	r14711
27	27	/// Symbol for function defining branches
28	28	/// </summary>
29		[Storable~~Class~~("44A4CDA8-FD0B-4457-AECD-CAD975D07246")]
	29	[StorableType("44A4CDA8-FD0B-4457-AECD-CAD975D07246")]
30	30	[Item(Defun.DefunName, Defun.DefunDescription)]
31	31	public sealed class Defun : Symbol, IReadOnlySymbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/DefunTreeNode.cs

r13368	r14711
23	23	using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
24	24	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
25		[Storable~~Class~~("F8EC6DFE-4085-4278-A353-B2860F5B34C5")]
	25	[StorableType("F8EC6DFE-4085-4278-A353-B2860F5B34C5")]
26	26	public sealed class DefunTreeNode : SymbolicExpressionTreeTopLevelNode {
27	27	private int numberOfArguments;

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/GroupSymbol.cs

r13368	r14711
27	27
28	28	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
29		[Storable~~Class~~("AA0D2C3B-94AF-4059-8B3E-927ED79A6B8B")]
	29	[StorableType("AA0D2C3B-94AF-4059-8B3E-927ED79A6B8B")]
30	30	public sealed class GroupSymbol : Symbol {
31	31	private const int minimumArity = 0;

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/InvokeFunction.cs

r13368	r14711
27	27	/// Symbol for invoking automatically defined functions
28	28	/// </summary>
29		[Storable~~Class~~("FCA223C9-71BF-4418-82D0-95434CF4E9A6")]
	29	[StorableType("FCA223C9-71BF-4418-82D0-95434CF4E9A6")]
30	30	[Item(InvokeFunction.InvokeFunctionName, InvokeFunction.InvokeFunctionDescription)]
31	31	public sealed class InvokeFunction : Symbol, IReadOnlySymbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/InvokeFunctionTreeNode.cs

r13368	r14711
24	24	using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
25	25	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
26		[Storable~~Class~~("808AA492-D4B3-4A7C-A4D8-5F24527F52E9")]
	26	[StorableType("808AA492-D4B3-4A7C-A4D8-5F24527F52E9")]
27	27	public sealed class InvokeFunctionTreeNode : SymbolicExpressionTreeNode {
28	28	public new InvokeFunction Symbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/ProgramRootSymbol.cs

r13368	r14711
24	24	using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
25	25	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
26		[Storable~~Class~~("7C7EC582-BCB8-4742-9C71-BE6567ACDD78")]
	26	[StorableType("7C7EC582-BCB8-4742-9C71-BE6567ACDD78")]
27	27	[Item(ProgramRootSymbol.ProgramRootSymbolName, ProgramRootSymbol.ProgramRootSymbolDescription)]
28	28	public sealed class ProgramRootSymbol : Symbol, IReadOnlySymbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/SimpleSymbol.cs

r13368	r14711
26	26
27	27	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
28		[Storable~~Class~~("A1466748-5BEF-424C-94B5-FCBFB4809A91")]
	28	[StorableType("A1466748-5BEF-424C-94B5-FCBFB4809A91")]
29	29	[Item("SimpleSymbol", "Represents a symbol that is identified by its name.")]
30	30	[NonDiscoverableType]

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/StartSymbol.cs

r13368	r14711
24	24	using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
25	25	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
26		[Storable~~Class~~("3E7741C3-49B0-446E-B93F-F8FC335DE305")]
	26	[StorableType("3E7741C3-49B0-446E-B93F-F8FC335DE305")]
27	27	[Item(StartSymbol.StartSymbolName, StartSymbol.StartSymbolDescription)]
28	28	public sealed class StartSymbol : Symbol, IReadOnlySymbol {

branches/PersistenceOverhaul/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Symbols/Symbol.cs

r13368	r14711
27	27
28	28	namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
29		[Storable~~Class~~("91F02388-FBF4-4E12-BF5E-661684A62499")]
	29	[StorableType("91F02388-FBF4-4E12-BF5E-661684A62499")]
30	30	[Item("Symbol", "Represents a symbol in a symbolic function tree.")]
31	31	public abstract class Symbol : NamedItem, ISymbol {

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