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Timestamp:
03/02/15 16:29:24 (10 years ago)
Author:
mkommend
Message:

#2326: Merged all branch changes in the trunk.

Location:
trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4
Files:
4 edited
1 copied

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  • trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification-3.4.csproj

    r11623 r12103  
    126126    <Compile Include="ModelCreators\NormalDistributedThresholdsModelCreator.cs" />
    127127    <Compile Include="MultiObjective\SymbolicClassificationMultiObjectiveValidationBestSolutionAnalyzer.cs" />
     128    <Compile Include="SymbolicClassificationPhenotypicDiversityAnalyzer.cs" />
    128129    <Compile Include="SymbolicClassificationPruningAnalyzer.cs" />
    129130    <Compile Include="SymbolicClassificationSolutionImpactValuesCalculator.cs" />
    … …  
    222223      <Private>False</Private>
    223224    </ProjectReference>
     225    <ProjectReference Include="..\..\HeuristicLab.Optimization.Operators\3.3\HeuristicLab.Optimization.Operators-3.3.csproj">
     226      <Project>{25087811-F74C-4128-BC86-8324271DA13E}</Project>
     227      <Name>HeuristicLab.Optimization.Operators-3.3</Name>
     228      <Private>False</Private>
     229    </ProjectReference>
    224230    <ProjectReference Include="..\..\HeuristicLab.Optimization\3.3\HeuristicLab.Optimization-3.3.csproj">
    225231      <Project>{14AB8D24-25BC-400C-A846-4627AA945192}</Project>

  • trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/MultiObjective/SymbolicClassificationMultiObjectiveProblem.cs

    r12012 r12103  
    2323using HeuristicLab.Core;
    2424using HeuristicLab.Data;
     25using HeuristicLab.Optimization;
    2526using HeuristicLab.Parameters;
    2627using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    … …  
    105106      Operators.Add(new SymbolicClassificationMultiObjectiveTrainingBestSolutionAnalyzer());
    106107      Operators.Add(new SymbolicClassificationMultiObjectiveValidationBestSolutionAnalyzer());
     108      Operators.Add(new SymbolicExpressionTreePhenotypicSimilarityCalculator());
     109      Operators.Add(new SymbolicClassificationPhenotypicDiversityAnalyzer(Operators.OfType<SymbolicExpressionTreePhenotypicSimilarityCalculator>()));
    107110      ParameterizeOperators();
    108111    }
    … …  
    135138          op.ModelCreatorParameter.ActualName = ModelCreatorParameter.Name;
    136139      }
     140
     141      foreach (var op in Operators.OfType<ISolutionSimilarityCalculator>()) {
     142        op.SolutionVariableName = SolutionCreator.SymbolicExpressionTreeParameter.ActualName;
     143        op.QualityVariableName = Evaluator.QualitiesParameter.ActualName;
     144
     145        if (op is SymbolicExpressionTreePhenotypicSimilarityCalculator) {
     146          var phenotypicSimilarityCalculator = (SymbolicExpressionTreePhenotypicSimilarityCalculator)op;
     147          phenotypicSimilarityCalculator.ProblemData = ProblemData;
     148          phenotypicSimilarityCalculator.Interpreter = SymbolicExpressionTreeInterpreter;
     149        }
     150      }
    137151    }
    138152  }

  • trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/SingleObjective/SymbolicClassificationSingleObjectiveBoundedMeanSquaredErrorEvaluator.cs

    r12012 r12103  
    2929using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    3030
    31 namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Classification.SingleObjective {
     31namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Classification {
    3232  [Item("Bounded Mean squared error Evaluator", "Calculates the bounded mean squared error of a symbolic classification solution (estimations above or below the class values are only penaltilized linearly.")]
    3333  [StorableClass]

  • trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/SingleObjective/SymbolicClassificationSingleObjectiveProblem.cs

    r12012 r12103  
    2222using HeuristicLab.Common;
    2323using HeuristicLab.Core;
     24using HeuristicLab.Optimization;
    2425using HeuristicLab.Parameters;
    2526using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
    … …  
    115116      Operators.Add(new SymbolicClassificationSingleObjectiveTrainingParetoBestSolutionAnalyzer());
    116117      Operators.Add(new SymbolicClassificationSingleObjectiveValidationParetoBestSolutionAnalyzer());
     118      Operators.Add(new SymbolicExpressionTreePhenotypicSimilarityCalculator());
     119      Operators.Add(new SymbolicClassificationPhenotypicDiversityAnalyzer(Operators.OfType<SymbolicExpressionTreePhenotypicSimilarityCalculator>()));
    117120      ParameterizeOperators();
    118121    }
    … …  
    145148          op.ModelCreatorParameter.ActualName = ModelCreatorParameter.Name;
    146149      }
     150
     151      foreach (var op in Operators.OfType<ISolutionSimilarityCalculator>()) {
     152        op.SolutionVariableName = SolutionCreator.SymbolicExpressionTreeParameter.ActualName;
     153        op.QualityVariableName = Evaluator.QualityParameter.ActualName;
     154
     155        if (op is SymbolicExpressionTreePhenotypicSimilarityCalculator) {
     156          var phenotypicSimilarityCalculator = (SymbolicExpressionTreePhenotypicSimilarityCalculator)op;
     157          phenotypicSimilarityCalculator.ProblemData = ProblemData;
     158          phenotypicSimilarityCalculator.Interpreter = SymbolicExpressionTreeInterpreter;
     159        }
     160      }
    147161    }
    148162  }

  • trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Classification/3.4/SymbolicClassificationPhenotypicDiversityAnalyzer.cs

    r12100 r12103  
    3434  [Item("SymbolicClassificationPhenotypicDiversityAnalyzer", "An analyzer which calculates diversity based on the phenotypic distance between trees")]
    3535  [StorableClass]
    36   public class SymbolicClassificationPhenotypicDiversityAnalyzer : PopulationSimilarityAnalyzer {
     36  public class SymbolicClassificationPhenotypicDiversityAnalyzer : PopulationSimilarityAnalyzer,
     37    ISymbolicDataAnalysisBoundedOperator, ISymbolicDataAnalysisInterpreterOperator, ISymbolicExpressionTreeOperator {
    3738    #region parameter names
    3839    private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
    … …  
    8990
    9091      UpdateCounterParameter.ActualName = "PhenotypicDiversityAnalyzerUpdateCounter";
     92      DiversityResultName = "Phenotypic Similarity";
    9193    }
    9294
    … …  
    100102    }
    101103
    102     private SymbolicClassificationPhenotypicDiversityAnalyzer(SymbolicClassificationPhenotypicDiversityAnalyzer original, Cloner cloner)
     104    protected SymbolicClassificationPhenotypicDiversityAnalyzer(SymbolicClassificationPhenotypicDiversityAnalyzer original, Cloner cloner)
    103105      : base(original, cloner) {
    104106    }
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