Changeset 10429

Timestamp:

01/29/14 23:29:50 (10 years ago)

Author:

bburlacu

Message:

#1837: Merged trunk changes.

Location:

branches/Sliding Window GP

Files:

• HeuristicLab.Problems.DataAnalysis.Symbolic (modified) (1 prop)
• HeuristicLab.Problems.DataAnalysis.Symbolic.Classification (modified) (1 prop)
• HeuristicLab.Problems.DataAnalysis.Symbolic.Regression (modified) (1 prop)
• HeuristicLab.Problems.DataAnalysis.Symbolic.Views (modified) (1 prop)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisSingleObjectivePruningAnalyzer.cs (modified) (6 diffs)
• HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SymbolicDataAnalysisExpressionPruningOperator.cs (modified) (5 diffs)

branches/Sliding Window GP/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Analyzers/SymbolicDataAnalysisSingleObjectivePruningAnalyzer.cs

@@ -32 +32 @@
     private const string NodeImpactThresholdParameterName = "ImpactThreshold";
 
+    private const string FitnessCalculationPartitionParameterName = "FitnessCalculationPartition";
+
     private bool reentry;
     [Storable]
@@ -52 +54 @@
       get { return (ILookupParameter<IDataAnalysisProblemData>)Parameters[ProblemDataParameterName]; }
     }
+    public ILookupParameter<IntRange> FitnessCalculationPartitionParameter {
+      get { return (ILookupParameter<IntRange>)Parameters[FitnessCalculationPartitionParameterName]; }
+    }
     private ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter> InterpreterParameter {
       get { return (ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>)Parameters[InterpreterParameterName]; }
@@ -76 +81 @@
     #region properties
     protected IDataAnalysisProblemData ProblemData { get { return ProblemDataParameter.ActualValue; } }
+    protected IntRange FitnessCalculationPartition { get { return FitnessCalculationPartitionParameter.ActualValue; } }
     protected ISymbolicDataAnalysisExpressionTreeInterpreter Interpreter { get { return InterpreterParameter.ActualValue; } }
     protected IntValue UpdateInterval { get { return UpdateIntervalParameter.Value; } }
@@ -89 +95 @@
     #endregion
 
+    #region IStatefulItem members
+    public override void InitializeState() {
+      base.InitializeState();
+      UpdateCounter.Value = 0;
+      PrunedSubtrees.Value = 0;
+      PrunedTrees.Value = 0;
+    }
+    public override void ClearState() {
+      base.ClearState();
+      UpdateCounter.Value = 0;
+      PrunedSubtrees.Value = 0;
+      PrunedTrees.Value = 0;
+    }
+    #endregion
+
     [StorableConstructor]
     protected SymbolicDataAnalysisSingleObjectivePruningAnalyzer(bool deserializing) : base(deserializing) { }
+    [StorableHook(HookType.AfterDeserialization)]
+    private void AfterDeserialization() {
+      if (!Parameters.ContainsKey(FitnessCalculationPartitionParameterName))
+        Parameters.Add(new LookupParameter<IntRange>(FitnessCalculationPartitionParameterName, ""));
+    }
     protected SymbolicDataAnalysisSingleObjectivePruningAnalyzer(SymbolicDataAnalysisSingleObjectivePruningAnalyzer original, Cloner cloner)
       : base(original, cloner) {
@@ -110 +136 @@
       Parameters.Add(new FixedValueParameter<DoubleValue>(NodeImpactThresholdParameterName, new DoubleValue(0.0)));
       Parameters.Add(new FixedValueParameter<BoolValue>(PruneOnlyZeroImpactNodesParameterName, new BoolValue(false)));
+      Parameters.Add(new LookupParameter<IntRange>(FitnessCalculationPartitionParameterName, ""));
     }
 
@@ -147 +174 @@
             Random = Random,
             PruneOnlyZeroImpactNodes = PruneOnlyZeroImpactNodes.Value,
-            NodeImpactThreshold = NodeImpactThreshold.Value
+            NodeImpactThreshold = NodeImpactThreshold.Value,
+            FitnessCalculationPartition = FitnessCalculationPartition
           };
           operations.Add(ExecutionContext.CreateChildOperation(op, ExecutionContext.Scope));

branches/Sliding Window GP/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/SymbolicDataAnalysisExpressionPruningOperator.cs

@@ -49 +49 @@
     private DoubleValue PrunedTrees { get { return NumberOfPrunedTreesParameter.ActualValue; } }
     #endregion
+
+    [StorableConstructor]
+    protected SymbolicDataAnalysisExpressionPruningOperator(bool deserializing) : base(deserializing) { }
     public override IDeepCloneable Clone(Cloner cloner) {
       return new SymbolicDataAnalysisExpressionPruningOperator(this, cloner);
     }
-    private SymbolicDataAnalysisExpressionPruningOperator(SymbolicDataAnalysisExpressionPruningOperator original, Cloner cloner)
+    protected SymbolicDataAnalysisExpressionPruningOperator(SymbolicDataAnalysisExpressionPruningOperator original, Cloner cloner)
       : base(original, cloner) {
     }
@@ -64 +67 @@
     public IDataAnalysisProblemData ProblemData { get; set; }
     public ISymbolicDataAnalysisSolutionImpactValuesCalculator ImpactsCalculator { get; set; }
+
+    public IntRange FitnessCalculationPartition { get; set; }
     public IRandom Random { get; set; }
 
@@ -73 +78 @@
 
       var nodes = Model.SymbolicExpressionTree.Root.GetSubtree(0).GetSubtree(0).IterateNodesPrefix().ToList();
+      var rows = Enumerable.Range(FitnessCalculationPartition.Start, FitnessCalculationPartition.Size).ToList();
 
       for (int j = 0; j < nodes.Count; ++j) {
@@ -78 +84 @@
         if (node is ConstantTreeNode) continue;
 
-        var impact = ImpactsCalculator.CalculateImpactValue(Model, node, ProblemData, ProblemData.TrainingIndices);
+        var impact = ImpactsCalculator.CalculateImpactValue(Model, node, ProblemData, rows);
 
         if (PruneOnlyZeroImpactNodes) {
@@ -86 +92 @@
         }
 
-        var replacementValue = ImpactsCalculator.CalculateReplacementValue(Model, node, ProblemData, ProblemData.TrainingIndices);
+        var replacementValue = ImpactsCalculator.CalculateReplacementValue(Model, node, ProblemData, rows);
         var constantNode = new ConstantTreeNode(new Constant()) { Value = replacementValue };
         ReplaceWithConstant(node, constantNode);