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source: trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic/3.4/Formatters/SymbolicDataAnalysisExpressionMATLABFormatter.cs @ 6113

Last change on this file since 6113 was 5809, checked in by mkommend, 13 years ago

#1418: Reintegrated branch into trunk.

File size: 12.8 KB
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[5017]1#region License Information
2/* HeuristicLab
[5433]3 * Copyright (C) 2002-2011 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
[5017]4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System.Text;
[5019]23using System.Linq;
[5017]24using HeuristicLab.Core;
25using HeuristicLab.Common;
26using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
27using HeuristicLab.Problems.DataAnalysis;
28using System.Collections.Generic;
29using System;
[5431]30using System.Globalization;
[5745]31using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
[5017]32
[5745]33namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
[5017]34
[5745]35  [Item("MATLAB String Formatter", "String formatter for string representations of symbolic data analysis expressions in MATLAB syntax.")]
[5431]36  [StorableClass]
[5745]37  public sealed class SymbolicDataAnalysisExpressionMATLABFormatter : NamedItem, ISymbolicExpressionTreeStringFormatter {
[5431]38    private int currentLag;
[5017]39
[5431]40    [StorableConstructor]
[5745]41    private SymbolicDataAnalysisExpressionMATLABFormatter(bool deserializing) : base(deserializing) { }
42    private SymbolicDataAnalysisExpressionMATLABFormatter(SymbolicDataAnalysisExpressionMATLABFormatter original, Cloner cloner) : base(original, cloner) { }
43    public SymbolicDataAnalysisExpressionMATLABFormatter()
[5019]44      : base() {
[5745]45      Name = ItemName;
46      Description = ItemDescription;
[5017]47    }
[5431]48    public override IDeepCloneable Clone(Cloner cloner) {
[5745]49      return new SymbolicDataAnalysisExpressionMATLABFormatter(this, cloner);
[5431]50    }
51    private int currentIndexNumber;
52    public string CurrentIndexVariable {
53      get {
54        return "i" + currentIndexNumber;
55      }
56    }
57    private void ReleaseIndexVariable() {
58      currentIndexNumber--;
59    }
[5017]60
[5431]61    private string AllocateIndexVariable() {
62      currentIndexNumber++;
63      return CurrentIndexVariable;
64    }
65
[5745]66    public string Format(ISymbolicExpressionTree symbolicExpressionTree) {
[5431]67      currentLag = 0;
68      currentIndexNumber = 0;
[5017]69      return FormatRecursively(symbolicExpressionTree.Root);
70    }
71
[5745]72    private string FormatRecursively(ISymbolicExpressionTreeNode node) {
73      ISymbol symbol = node.Symbol;
[5017]74      StringBuilder stringBuilder = new StringBuilder();
75
76      if (symbol is ProgramRootSymbol) {
[5019]77        var variableNames = node.IterateNodesPostfix()
78          .OfType<VariableTreeNode>()
79          .Select(n => n.VariableName)
[5020]80          .Distinct()
[5019]81          .OrderBy(x => x);
[5022]82        stringBuilder.AppendLine("function test_model");
[5017]83        foreach (string variableName in variableNames)
[5022]84          stringBuilder.AppendLine("  " + variableName + " = Data(:, ???);");
[5745]85        stringBuilder.AppendLine("  for " + CurrentIndexVariable + " = size(Data,1):-1:1");
86        stringBuilder.AppendLine("    Target_estimated(" + CurrentIndexVariable + ") = " + FormatRecursively(node.GetSubtree(0)) + ";");
[5433]87        stringBuilder.AppendLine("  end");
88        stringBuilder.AppendLine("end");
[5022]89        stringBuilder.AppendLine();
90        stringBuilder.AppendLine("function y = log_(x)");
91        stringBuilder.AppendLine("  if(x<=0) y = NaN;");
92        stringBuilder.AppendLine("  else     y = log(x);");
[5433]93        stringBuilder.AppendLine("  end");
94        stringBuilder.AppendLine("end");
95        stringBuilder.AppendLine();
96        stringBuilder.AppendLine("function y = fivePoint(f0, f1, f3, f4)");
97        stringBuilder.AppendLine("  y = (f0 + 2*f1 - 2*f3 - f4) / 8;");
98        stringBuilder.AppendLine("end");
[5017]99        return stringBuilder.ToString();
100      }
101
102      if (symbol is StartSymbol)
[5745]103        return FormatRecursively(node.GetSubtree(0));
[5017]104
105      stringBuilder.Append("(");
106
107      if (symbol is Addition) {
[5745]108        for (int i = 0; i < node.SubtreesCount; i++) {
[5017]109          if (i > 0) stringBuilder.Append("+");
[5745]110          stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]111        }
112      } else if (symbol is And) {
[5021]113        stringBuilder.Append("((");
[5745]114        for (int i = 0; i < node.SubtreesCount; i++) {
[5017]115          if (i > 0) stringBuilder.Append("&");
116          stringBuilder.Append("((");
[5745]117          stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]118          stringBuilder.Append(")>0)");
119        }
[5021]120        stringBuilder.Append(")-0.5)*2"); // MATLAB maps false and true to 0 and 1, resp., we map this result to -1.0 and +1.0, resp.
[5017]121      } else if (symbol is Average) {
122        stringBuilder.Append("(1/");
[5745]123        stringBuilder.Append(node.SubtreesCount);
[5017]124        stringBuilder.Append(")*(");
[5745]125        for (int i = 0; i < node.SubtreesCount; i++) {
[5017]126          if (i > 0) stringBuilder.Append("+");
127          stringBuilder.Append("(");
[5745]128          stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]129          stringBuilder.Append(")");
130        }
131        stringBuilder.Append(")");
132      } else if (symbol is Constant) {
133        ConstantTreeNode constantTreeNode = node as ConstantTreeNode;
[5431]134        stringBuilder.Append(constantTreeNode.Value.ToString(CultureInfo.InvariantCulture));
[5017]135      } else if (symbol is Cosine) {
136        stringBuilder.Append("cos(");
[5745]137        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]138        stringBuilder.Append(")");
139      } else if (symbol is Division) {
[5745]140        if (node.SubtreesCount == 1) {
[5017]141          stringBuilder.Append("1/");
[5745]142          stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]143        } else {
[5745]144          stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]145          stringBuilder.Append("/(");
[5745]146          for (int i = 1; i < node.SubtreesCount; i++) {
[5017]147            if (i > 1) stringBuilder.Append("*");
[5745]148            stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]149          }
150          stringBuilder.Append(")");
151        }
152      } else if (symbol is Exponential) {
153        stringBuilder.Append("exp(");
[5745]154        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]155        stringBuilder.Append(")");
156      } else if (symbol is GreaterThan) {
[5021]157        stringBuilder.Append("((");
[5745]158        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]159        stringBuilder.Append(">");
[5745]160        stringBuilder.Append(FormatRecursively(node.GetSubtree(1)));
[5021]161        stringBuilder.Append(")-0.5)*2"); // MATLAB maps false and true to 0 and 1, resp., we map this result to -1.0 and +1.0, resp.
[5017]162      } else if (symbol is IfThenElse) {
163        stringBuilder.Append("(");
[5745]164        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]165        stringBuilder.Append(">0)*");
[5745]166        stringBuilder.Append(FormatRecursively(node.GetSubtree(1)));
[5017]167        stringBuilder.Append("+");
168        stringBuilder.Append("(");
[5745]169        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5021]170        stringBuilder.Append("<=0)*");
[5745]171        stringBuilder.Append(FormatRecursively(node.GetSubtree(2)));
[5017]172      } else if (symbol is LaggedVariable) {
[5431]173        // this if must be checked before if(symbol is LaggedVariable)
[5017]174        LaggedVariableTreeNode laggedVariableTreeNode = node as LaggedVariableTreeNode;
[5431]175        stringBuilder.Append(laggedVariableTreeNode.Weight.ToString(CultureInfo.InvariantCulture));
[5017]176        stringBuilder.Append("*");
[5431]177        stringBuilder.Append(laggedVariableTreeNode.VariableName + LagToString(currentLag + laggedVariableTreeNode.Lag));
[5017]178      } else if (symbol is LessThan) {
[5021]179        stringBuilder.Append("((");
[5745]180        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]181        stringBuilder.Append("<");
[5745]182        stringBuilder.Append(FormatRecursively(node.GetSubtree(1)));
[5021]183        stringBuilder.Append(")-0.5)*2"); // MATLAB maps false and true to 0 and 1, resp., we map this result to -1.0 and +1.0, resp.
[5017]184      } else if (symbol is Logarithm) {
[5022]185        stringBuilder.Append("log_(");
[5745]186        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]187        stringBuilder.Append(")");
188      } else if (symbol is Multiplication) {
[5745]189        for (int i = 0; i < node.SubtreesCount; i++) {
[5017]190          if (i > 0) stringBuilder.Append("*");
[5745]191          stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]192        }
193      } else if (symbol is Not) {
[5745]194        stringBuilder.Append("~(");
195        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
196        stringBuilder.Append(" > 0 )");
[5017]197      } else if (symbol is Or) {
[5021]198        stringBuilder.Append("((");
[5745]199        for (int i = 0; i < node.SubtreesCount; i++) {
[5017]200          if (i > 0) stringBuilder.Append("|");
201          stringBuilder.Append("((");
[5745]202          stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]203          stringBuilder.Append(")>0)");
204        }
[5021]205        stringBuilder.Append(")-0.5)*2"); // MATLAB maps false and true to 0 and 1, resp., we map this result to -1.0 and +1.0, resp.
[5017]206      } else if (symbol is Sine) {
207        stringBuilder.Append("sin(");
[5745]208        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]209        stringBuilder.Append(")");
210      } else if (symbol is Subtraction) {
[5745]211        if (node.SubtreesCount == 1) {
[5017]212          stringBuilder.Append("-1*");
[5745]213          stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]214        } else {
[5745]215          stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
216          for (int i = 1; i < node.SubtreesCount; i++) {
[5017]217            stringBuilder.Append("-");
[5745]218            stringBuilder.Append(FormatRecursively(node.GetSubtree(i)));
[5017]219          }
220        }
221      } else if (symbol is Tangent) {
222        stringBuilder.Append("tan(");
[5745]223        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5017]224        stringBuilder.Append(")");
[5745]225      } else if (symbol is HeuristicLab.Problems.DataAnalysis.Symbolic.Variable) {
[5017]226        VariableTreeNode variableTreeNode = node as VariableTreeNode;
[5431]227        stringBuilder.Append(variableTreeNode.Weight.ToString(CultureInfo.InvariantCulture));
[5017]228        stringBuilder.Append("*");
[5431]229        stringBuilder.Append(variableTreeNode.VariableName + LagToString(currentLag));
230      } else if (symbol is Power) {
231        stringBuilder.Append("(");
[5745]232        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]233        stringBuilder.Append(")^round(");
[5745]234        stringBuilder.Append(FormatRecursively(node.GetSubtree(1)));
[5431]235        stringBuilder.Append(")");
236      } else if (symbol is Root) {
237        stringBuilder.Append("(");
[5745]238        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]239        stringBuilder.Append(")^(1 / round(");
[5745]240        stringBuilder.Append(FormatRecursively(node.GetSubtree(1)));
[5431]241        stringBuilder.Append("))");
242      } else if (symbol is Derivative) {
243        stringBuilder.Append("fivePoint(");
244        // f0
[5745]245        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]246        stringBuilder.Append(", ");
247        // f1
248        currentLag--;
[5745]249        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]250        stringBuilder.Append(", ");
251        // f3
252        currentLag -= 2;
[5745]253        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]254        stringBuilder.Append(", ");
255        currentLag--;
256        // f4
[5745]257        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]258        stringBuilder.Append(")");
259        currentLag += 4;
260      } else if (symbol is Integral) {
261        var laggedNode = node as LaggedTreeNode;
262        string prevCounterVariable = CurrentIndexVariable;
263        string counterVariable = AllocateIndexVariable();
[5745]264        stringBuilder.AppendLine(" sum (map(@(" + counterVariable + ") " + FormatRecursively(node.GetSubtree(0)) + ", (" + prevCounterVariable + "+" + laggedNode.Lag + "):" + prevCounterVariable + "))");
[5431]265        ReleaseIndexVariable();
266      } else if (symbol is TimeLag) {
267        var laggedNode = node as LaggedTreeNode;
268        currentLag += laggedNode.Lag;
[5745]269        stringBuilder.Append(FormatRecursively(node.GetSubtree(0)));
[5431]270        currentLag -= laggedNode.Lag;
[5019]271      } else {
[5017]272        stringBuilder.Append("ERROR");
273      }
274
275      stringBuilder.Append(")");
276      return stringBuilder.ToString();
277    }
278
[5431]279
280    private string LagToString(int lag) {
281      if (lag < 0) {
282        return "(" + CurrentIndexVariable + "" + lag + ")";
283      } else if (lag > 0) {
284        return "(" + CurrentIndexVariable + "+" + lag + ")";
285      } else return "(" + CurrentIndexVariable + ")";
[5017]286    }
[5431]287
[5017]288  }
289}
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