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source: trunk/sources/HeuristicLab.Problems.DataAnalysis.Symbolic.Regression/3.4/SingleObjective/Evaluators/SymbolicRegressionVarianceModelEvaluator.cs @ 14826

Last change on this file since 14826 was 14528, checked in by gkronber, 8 years ago

#2722 added an evaluator for symbolic regression models which calculates the likelihood that variable values are sampled from a zero mean Gaussian distribution where the variance is given by the model. This can be used to learn input-dependent variances.

File size: 4.5 KB
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1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System;
23using System.Collections.Generic;
24using System.Linq;
25using HeuristicLab.Common;
26using HeuristicLab.Core;
27using HeuristicLab.Data;
28using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
29using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
30
31namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
32  [Item("Variance Model Evaluator", "Can be used for modeling variance of a variable. Assumes that the variable values are sampled from a zero mean Gaussian. Use a model for the target variable to calculate the residuals. In a second step use the residuals as the target variable and use this evaluator to create the model for the conditional variance.")]
33  [StorableClass]
34  public class SymbolicRegressionVarianceModelEvaluator : SymbolicRegressionSingleObjectiveEvaluator {
35    [StorableConstructor]
36    protected SymbolicRegressionVarianceModelEvaluator(bool deserializing) : base(deserializing) { }
37    protected SymbolicRegressionVarianceModelEvaluator(SymbolicRegressionVarianceModelEvaluator original, Cloner cloner)
38      : base(original, cloner) {
39    }
40    public override IDeepCloneable Clone(Cloner cloner) {
41      return new SymbolicRegressionVarianceModelEvaluator(this, cloner);
42    }
43
44    public SymbolicRegressionVarianceModelEvaluator() : base() { }
45
46    public override bool Maximization { get { return true; } }
47
48    public override IOperation InstrumentedApply() {
49      var solution = SymbolicExpressionTreeParameter.ActualValue;
50      IEnumerable<int> rows = GenerateRowsToEvaluate();
51
52      double quality = Calculate(SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, solution, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper, ProblemDataParameter.ActualValue, rows);
53      QualityParameter.ActualValue = new DoubleValue(quality);
54
55      return base.InstrumentedApply();
56    }
57
58    public static double Calculate(ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, ISymbolicExpressionTree solution, double lowerEstimationLimit, double upperEstimationLimit, IRegressionProblemData problemData, IEnumerable<int> rows) {
59      IEnumerable<double> estimatedValues = interpreter.GetSymbolicExpressionTreeValues(solution, problemData.Dataset, rows);
60      IEnumerable<double> targetValues = problemData.Dataset.GetDoubleValues(problemData.TargetVariable, rows);
61      IEnumerable<double> boundedEstimatedValues = estimatedValues.LimitToRange(lowerEstimationLimit, upperEstimationLimit);
62
63      // assumes residuals follow a zero-mean Gaussian distribution where the variance is a function of the inputs
64
65      // boundedEstimatedValues is the estimator for std.dev.
66      // log likelihood for N(target_i | 0, boundesEstimatedValues)
67      var l2pi = Math.Log(2.0 * Math.PI);
68      var ll = -0.5 *
69               boundedEstimatedValues.Zip(targetValues, (s, t) =>
70                 +l2pi
71                 + Math.Log(s * s)
72                 + (t * t) / (s * s)
73                 ).Sum();
74
75      return ll;
76    }
77
78    public override double Evaluate(IExecutionContext context, ISymbolicExpressionTree tree, IRegressionProblemData problemData, IEnumerable<int> rows) {
79      SymbolicDataAnalysisTreeInterpreterParameter.ExecutionContext = context;
80      EstimationLimitsParameter.ExecutionContext = context;
81
82      double ll = Calculate(SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, tree, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper, problemData, rows);
83
84      SymbolicDataAnalysisTreeInterpreterParameter.ExecutionContext = null;
85      EstimationLimitsParameter.ExecutionContext = null;
86
87      return ll;
88    }
89  }
90}
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