[3651] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2010 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System.Linq;
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[4068] | 23 | using HeuristicLab.Analysis;
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[3651] | 24 | using HeuristicLab.Core;
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| 25 | using HeuristicLab.Data;
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[4068] | 26 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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[3651] | 27 | using HeuristicLab.Optimization;
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| 28 | using HeuristicLab.Parameters;
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| 29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 30 | using HeuristicLab.Problems.DataAnalysis.Symbolic;
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| 31 |
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| 32 | namespace HeuristicLab.Problems.DataAnalysis.Regression.Symbolic.Analyzers {
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[3681] | 33 | [Item("BestSymbolicRegressionSolutionAnalyzer", "An operator for analyzing the best solution of symbolic regression problems given in symbolic expression tree encoding.")]
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[3651] | 34 | [StorableClass]
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[3892] | 35 | public sealed class BestSymbolicRegressionSolutionAnalyzer : RegressionSolutionAnalyzer, ISymbolicRegressionAnalyzer {
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[3651] | 36 | private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
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| 37 | private const string SymbolicExpressionTreeInterpreterParameterName = "SymbolicExpressionTreeInterpreter";
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[3892] | 38 | private const string BestSolutionInputvariableCountResultName = "Variables used by best solution";
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[3905] | 39 | private const string VariableFrequenciesParameterName = "VariableFrequencies";
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| 40 | private const string VariableImpactsResultName = "Integrated variable frequencies";
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[3651] | 41 | private const string BestSolutionParameterName = "BestSolution";
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| 42 |
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[3892] | 43 | #region parameter properties
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[3681] | 44 | public ScopeTreeLookupParameter<SymbolicExpressionTree> SymbolicExpressionTreeParameter {
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| 45 | get { return (ScopeTreeLookupParameter<SymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
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[3651] | 46 | }
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[3681] | 47 | public IValueLookupParameter<ISymbolicExpressionTreeInterpreter> SymbolicExpressionTreeInterpreterParameter {
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| 48 | get { return (IValueLookupParameter<ISymbolicExpressionTreeInterpreter>)Parameters[SymbolicExpressionTreeInterpreterParameterName]; }
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[3651] | 49 | }
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| 50 | public ILookupParameter<SymbolicRegressionSolution> BestSolutionParameter {
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| 51 | get { return (ILookupParameter<SymbolicRegressionSolution>)Parameters[BestSolutionParameterName]; }
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| 52 | }
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[3905] | 53 | public ILookupParameter<DataTable> VariableFrequenciesParameter {
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| 54 | get { return (ILookupParameter<DataTable>)Parameters[VariableFrequenciesParameterName]; }
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| 55 | }
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[3892] | 56 | #endregion
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| 57 | #region properties
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| 58 | public ISymbolicExpressionTreeInterpreter SymbolicExpressionTreeInterpreter {
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| 59 | get { return SymbolicExpressionTreeInterpreterParameter.ActualValue; }
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[3651] | 60 | }
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[3892] | 61 | public ItemArray<SymbolicExpressionTree> SymbolicExpressionTree {
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| 62 | get { return SymbolicExpressionTreeParameter.ActualValue; }
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[3651] | 63 | }
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[3905] | 64 | public DataTable VariableFrequencies {
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| 65 | get { return VariableFrequenciesParameter.ActualValue; }
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| 66 | }
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[3892] | 67 | #endregion
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[3651] | 68 |
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[3681] | 69 | public BestSymbolicRegressionSolutionAnalyzer()
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[3651] | 70 | : base() {
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[3659] | 71 | Parameters.Add(new ScopeTreeLookupParameter<SymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The symbolic expression trees to analyze."));
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[3681] | 72 | Parameters.Add(new ValueLookupParameter<ISymbolicExpressionTreeInterpreter>(SymbolicExpressionTreeInterpreterParameterName, "The interpreter that should be used for the analysis of symbolic expression trees."));
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[3905] | 73 | Parameters.Add(new LookupParameter<DataTable>(VariableFrequenciesParameterName, "The variable frequencies table to use for the calculation of variable impacts"));
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[3651] | 74 | Parameters.Add(new LookupParameter<SymbolicRegressionSolution>(BestSolutionParameterName, "The best symbolic regression solution."));
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| 75 | }
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| 76 |
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[3905] | 77 | [StorableHook(HookType.AfterDeserialization)]
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| 78 | private void Initialize() {
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| 79 | if (!Parameters.ContainsKey(VariableFrequenciesParameterName)) {
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| 80 | Parameters.Add(new LookupParameter<DataTable>(VariableFrequenciesParameterName, "The variable frequencies table to use for the calculation of variable impacts"));
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| 81 | }
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| 82 | }
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| 83 |
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[3892] | 84 | protected override DataAnalysisSolution UpdateBestSolution() {
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| 85 | double upperEstimationLimit = UpperEstimationLimit != null ? UpperEstimationLimit.Value : double.PositiveInfinity;
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| 86 | double lowerEstimationLimit = LowerEstimationLimit != null ? LowerEstimationLimit.Value : double.NegativeInfinity;
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[3651] | 87 |
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[3892] | 88 | int i = Quality.Select((x, index) => new { index, x.Value }).OrderBy(x => x.Value).First().index;
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[3651] | 89 |
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[3892] | 90 | if (BestSolutionQualityParameter.ActualValue == null || BestSolutionQualityParameter.ActualValue.Value > Quality[i].Value) {
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| 91 | var model = new SymbolicRegressionModel((ISymbolicExpressionTreeInterpreter)SymbolicExpressionTreeInterpreter.Clone(),
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[3915] | 92 | SymbolicExpressionTree[i]);
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[3892] | 93 | var solution = new SymbolicRegressionSolution(ProblemData, model, lowerEstimationLimit, upperEstimationLimit);
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[3996] | 94 | solution.Name = BestSolutionParameterName;
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| 95 | solution.Description = "Best solution on validation partition found over the whole run.";
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[3651] | 96 | BestSolutionParameter.ActualValue = solution;
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[3892] | 97 | BestSolutionQualityParameter.ActualValue = Quality[i];
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[3996] | 98 | BestSymbolicRegressionSolutionAnalyzer.UpdateSymbolicRegressionBestSolutionResults(solution, ProblemData, Results, VariableFrequencies);
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[3651] | 99 | }
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[3892] | 100 | return BestSolutionParameter.ActualValue;
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[3651] | 101 | }
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| 102 |
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[3996] | 103 | public static void UpdateBestSolutionResults(SymbolicRegressionSolution bestSolution, DataAnalysisProblemData problemData, ResultCollection results, IntValue currentGeneration, DataTable variableFrequencies) {
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| 104 | RegressionSolutionAnalyzer.UpdateBestSolutionResults(bestSolution, problemData, results, currentGeneration);
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| 105 | UpdateSymbolicRegressionBestSolutionResults(bestSolution, problemData, results, variableFrequencies);
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| 106 | }
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| 107 |
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| 108 | private static void UpdateSymbolicRegressionBestSolutionResults(SymbolicRegressionSolution bestSolution, DataAnalysisProblemData problemData, ResultCollection results, DataTable variableFrequencies) {
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| 109 | if (results.ContainsKey(BestSolutionInputvariableCountResultName)) {
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| 110 | results[BestSolutionInputvariableCountResultName].Value = new IntValue(bestSolution.Model.InputVariables.Count());
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| 111 | results[VariableImpactsResultName].Value = CalculateVariableImpacts(variableFrequencies);
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| 112 | } else {
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| 113 | results.Add(new Result(BestSolutionInputvariableCountResultName, new IntValue(bestSolution.Model.InputVariables.Count())));
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| 114 | results.Add(new Result(VariableImpactsResultName, CalculateVariableImpacts(variableFrequencies)));
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| 115 | }
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| 116 | }
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| 117 |
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| 118 |
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| 119 | private static DoubleMatrix CalculateVariableImpacts(DataTable variableFrequencies) {
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| 120 | if (variableFrequencies != null) {
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| 121 | var impacts = new DoubleMatrix(variableFrequencies.Rows.Count, 1, new string[] { "Impact" }, variableFrequencies.Rows.Select(x => x.Name));
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[3922] | 122 | impacts.SortableView = true;
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[3905] | 123 | int rowIndex = 0;
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[3996] | 124 | foreach (var dataRow in variableFrequencies.Rows) {
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[3905] | 125 | string variableName = dataRow.Name;
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| 126 | double integral = 0;
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| 127 | if (dataRow.Values.Count > 1) {
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| 128 | double baseline = dataRow.Values.First();
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| 129 | integral = (from value in dataRow.Values
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| 130 | select value - baseline)
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| 131 | .Sum();
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[3925] | 132 | integral /= dataRow.Values.Count;
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[3905] | 133 | }
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| 134 | impacts[rowIndex++, 0] = integral;
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| 135 | }
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| 136 | return impacts;
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| 137 | } else return new DoubleMatrix(1, 1);
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| 138 | }
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[3651] | 139 | }
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| 140 | }
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