[2229] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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[2185] | 23 | using System.Collections.Generic;
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| 24 | using System.Linq;
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| 25 | using System.Reflection;
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| 26 |
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| 27 | using HeuristicLab.Core;
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| 28 | using HeuristicLab.DataAnalysis;
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| 29 | using HeuristicLab.Data;
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[2194] | 30 | using System.Data.Linq;
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[2185] | 31 |
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[2194] | 32 | namespace HeuristicLab.Modeling.Database.SQLServerCompact {
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[2185] | 33 | public class DatabaseService : IModelingDatabase {
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| 34 | private readonly string connection;
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| 35 | public DatabaseService(string connection) {
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| 36 | this.connection = connection;
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[2221] | 37 | Connect();
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| 38 | if (!ctx.DatabaseExists())
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[2344] | 39 | ctx.CreateDatabase();
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[2185] | 40 | }
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| 41 |
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[2333] | 42 | public void EmptyDatabase() {
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[2339] | 43 | ctx.Connection.Dispose();
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[2221] | 44 | ctx.DeleteDatabase();
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[2339] | 45 | Connect();
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[2221] | 46 | ctx.CreateDatabase();
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[2185] | 47 | }
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| 48 |
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[2221] | 49 | private ModelingDataContext ctx;
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| 50 | public void Connect() {
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| 51 | if (ctx != null)
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[2339] | 52 | Disconnect();
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[2221] | 53 |
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| 54 | ctx = new ModelingDataContext(connection);
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| 55 | DataLoadOptions dlo = new DataLoadOptions();
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| 56 | dlo.LoadWith<ModelResult>(mr => mr.Result);
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[2355] | 57 | dlo.LoadWith<ModelMetaData>(mmd => mmd.MetaData);
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[2221] | 58 | dlo.LoadWith<InputVariableResult>(ir => ir.Variable);
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| 59 | dlo.LoadWith<InputVariableResult>(ir => ir.Result);
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| 60 | dlo.LoadWith<Model>(m => m.TargetVariable);
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[2370] | 61 | dlo.LoadWith<Model>(m => m.Algorithm);
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[2221] | 62 | ctx.LoadOptions = dlo;
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| 63 | }
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| 64 |
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| 65 | public void Disconnect() {
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| 66 | if (ctx == null)
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| 67 | return;
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[2339] | 68 | ctx.Connection.Dispose();
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[2221] | 69 | ctx.Dispose();
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| 70 | ctx = null;
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| 71 | }
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| 72 |
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[2382] | 73 | public IEnumerable<IModel> GetAllModels() {
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| 74 | return ctx.Models.ToList().Cast<IModel>();
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[2271] | 75 | }
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| 76 |
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[2382] | 77 | public IEnumerable<IVariable> GetAllVariables() {
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| 78 | return ctx.Variables.ToList().Cast<IVariable>();
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| 79 | }
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[2185] | 80 |
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[2382] | 81 | public IEnumerable<IResult> GetAllResults() {
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| 82 | return ctx.Results.ToList().Cast<IResult>();
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| 83 | }
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[2185] | 84 |
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[2382] | 85 | public IEnumerable<IResult> GetAllResultsForInputVariables() {
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| 86 | return (from ir in ctx.InputVariableResults select ir.Result).Distinct().ToList().Cast<IResult>();
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| 87 | }
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[2203] | 88 |
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[2382] | 89 | public IEnumerable<IMetaData> GetAllMetaData() {
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| 90 | return ctx.MetaData.ToList().Cast<IMetaData>();
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| 91 | }
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[2203] | 92 |
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[2382] | 93 | public IEnumerable<IAlgorithm> GetAllAlgorithms() {
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| 94 | return ctx.Algorithms.ToList().Cast<IAlgorithm>();
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| 95 | }
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[2217] | 96 |
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[2382] | 97 | public IModel CreateModel(ModelType modelType, IAlgorithm algorithm, IVariable targetVariable,
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| 98 | int trainingSamplesStart, int trainingSamplesEnd, int validationSamplesStart, int validationSamplesEnd, int testSamplesStart, int testSamplesEnd) {
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| 99 | return CreateModel(null, modelType, algorithm, targetVariable, trainingSamplesStart, trainingSamplesEnd, validationSamplesStart, validationSamplesEnd, testSamplesStart, testSamplesEnd);
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| 100 | }
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[2185] | 101 |
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[2382] | 102 | public IModel CreateModel(string modelName, ModelType modelType, IAlgorithm algorithm, IVariable targetVariable,
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| 103 | int trainingSamplesStart, int trainingSamplesEnd, int validationSamplesStart, int validationSamplesEnd, int testSamplesStart, int testSamplesEnd) {
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| 104 | Variable target = (Variable)targetVariable;
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| 105 | Algorithm algo = (Algorithm)algorithm;
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| 106 | Model model = new Model(target, algo, modelType);
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| 107 | model.Name = modelName;
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| 108 | model.TrainingSamplesStart = trainingSamplesStart;
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| 109 | model.TrainingSamplesEnd = trainingSamplesEnd;
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| 110 | model.ValidationSamplesStart = validationSamplesStart;
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| 111 | model.ValidationSamplesEnd = validationSamplesEnd;
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| 112 | model.TestSamplesStart = testSamplesStart;
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| 113 | model.TestSamplesEnd = testSamplesEnd;
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[2185] | 114 |
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[2382] | 115 | return model;
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| 116 | }
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[2344] | 117 |
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[2382] | 118 | public void PersistModel(IModel model) {
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[2203] | 119 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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[2382] | 120 | Model m = (Model)model;
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| 121 | Model orginal = ctx.Models.GetOriginalEntityState(m);
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| 122 | if (orginal == null)
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| 123 | ctx.Models.Attach(m);
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| 124 | ctx.Refresh(RefreshMode.KeepCurrentValues, m);
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[2185] | 125 | ctx.SubmitChanges();
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| 126 | }
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[2382] | 127 | }
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[2314] | 128 |
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[2382] | 129 | public void DeleteModel(IModel model) {
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| 130 | Model m = (Model)model;
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| 131 | ctx.ModelData.DeleteAllOnSubmit(ctx.ModelData.Where(x => x.Model == m));
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| 132 | ctx.ModelMetaData.DeleteAllOnSubmit(ctx.ModelMetaData.Where(x => x.Model == m));
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| 133 | ctx.ModelResults.DeleteAllOnSubmit(ctx.ModelResults.Where(x => x.Model == m));
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| 134 | ctx.InputVariableResults.DeleteAllOnSubmit(ctx.InputVariableResults.Where(x => x.Model == m));
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| 135 | ctx.InputVariables.DeleteAllOnSubmit(ctx.InputVariables.Where(x => x.Model == m));
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| 136 | Model orginal = ctx.Models.GetOriginalEntityState(m);
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| 137 | if (orginal == null)
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| 138 | ctx.Models.Attach(m);
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| 139 | ctx.Models.DeleteOnSubmit(m);
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| 140 | ctx.SubmitChanges();
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[2185] | 141 | }
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| 142 |
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| 143 | public Dataset GetDataset() {
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[2221] | 144 | if (ctx.Problems.Count() != 1)
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| 145 | throw new InvalidOperationException("Could not get dataset. No or more than one problems are persisted in the database.");
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| 146 | Problem problem = ctx.Problems.Single();
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| 147 | return problem.Dataset;
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[2185] | 148 | }
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| 149 |
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[2382] | 150 | public void PersistProblem(Dataset dataset) {
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[2185] | 151 | Problem problem;
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| 152 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 153 | if (ctx.Problems.Count() != 0)
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| 154 | throw new InvalidOperationException("Could not persist dataset. A dataset is already saved in the database.");
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| 155 | problem = new Problem(dataset);
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| 156 | ctx.Problems.InsertOnSubmit(problem);
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| 157 | foreach (string variable in dataset.VariableNames) {
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| 158 | ctx.Variables.InsertOnSubmit(new Variable(variable));
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| 159 | }
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| 160 | ctx.SubmitChanges();
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| 161 | }
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| 162 | }
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| 163 |
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[2382] | 164 | public IVariable GetVariable(string variableName) {
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| 165 | var variables = ctx.Variables.Where(v => v.Name == variableName);
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| 166 | if (variables.Count() != 1)
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| 167 | throw new ArgumentException("Zero or more than one variable with the name " + variableName + " are persisted in the database.");
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| 168 | return variables.Single();
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| 169 | }
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[2185] | 170 |
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[2382] | 171 | public IPredictor GetModelPredictor(IModel model) {
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| 172 | var data = (from md in ctx.ModelData
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| 173 | where md.Model == model
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| 174 | select md);
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| 175 | if (data.Count() != 1)
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| 176 | throw new ArgumentException("No predictor persisted for given model!");
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| 177 | return (IPredictor)PersistenceManager.RestoreFromGZip(data.Single().Data);
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| 178 | }
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| 179 |
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| 180 | public void PersistPredictor(IModel model, IPredictor predictor) {
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| 181 | Model m = (Model)model;
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| 182 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 183 | ctx.ModelData.DeleteAllOnSubmit(ctx.ModelData.Where(x => x.Model == m));
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| 184 | ctx.ModelResults.DeleteAllOnSubmit(ctx.ModelResults.Where(x => x.Model == m));
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| 185 | ctx.InputVariableResults.DeleteAllOnSubmit(ctx.InputVariableResults.Where(x => x.Model == m));
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| 186 | ctx.InputVariables.DeleteAllOnSubmit(ctx.InputVariables.Where(x => x.Model == m));
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| 187 |
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| 188 | ctx.ModelData.InsertOnSubmit(new ModelData(m, PersistenceManager.SaveToGZip(predictor)));
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| 189 | foreach (string variableName in predictor.GetInputVariables())
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| 190 | ctx.InputVariables.InsertOnSubmit(new InputVariable(m, (Variable)GetVariable(variableName)));
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| 191 |
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| 192 | ctx.SubmitChanges();
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| 193 | }
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| 194 | }
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| 195 |
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| 196 | public IAlgorithm GetOrPersistAlgorithm(string algorithmName) {
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[2185] | 197 | Algorithm algorithm;
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| 198 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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[2382] | 199 | var algorithms = ctx.Algorithms.Where(algo => algo.Name == algorithmName);
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[2185] | 200 | if (algorithms.Count() == 0) {
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[2382] | 201 | algorithm = new Algorithm(algorithmName, "");
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[2185] | 202 | ctx.Algorithms.InsertOnSubmit(algorithm);
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| 203 | ctx.SubmitChanges();
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| 204 | } else if (algorithms.Count() == 1)
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| 205 | algorithm = algorithms.Single();
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| 206 | else
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[2382] | 207 | throw new ArgumentException("Could not get Algorithm. More than one algorithm with the name " + algorithmName + " are saved in database.");
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[2185] | 208 | }
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| 209 | return algorithm;
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| 210 | }
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[2278] | 211 |
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[2382] | 212 | public IResult GetOrPersistResult(string resultName) {
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[2185] | 213 | Result result;
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| 214 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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[2382] | 215 | var results = ctx.Results.Where(r => r.Name == resultName);
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[2185] | 216 | if (results.Count() == 0) {
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[2382] | 217 | result = new Result(resultName);
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[2185] | 218 | ctx.Results.InsertOnSubmit(result);
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| 219 | ctx.SubmitChanges();
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| 220 | } else if (results.Count() == 1)
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| 221 | result = results.Single();
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| 222 | else
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[2382] | 223 | throw new ArgumentException("Could not get result. More than one result with the name " + resultName + " are saved in database.");
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[2185] | 224 | }
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| 225 | return result;
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| 226 | }
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| 227 |
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[2382] | 228 | public IMetaData GetOrPersistMetaData(string metaDataName) {
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| 229 | MetaData metadata;
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| 230 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 231 | var md = ctx.MetaData.Where(r => r.Name == metaDataName);
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| 232 | if (md.Count() == 0) {
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| 233 | metadata = new MetaData(metaDataName);
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| 234 | ctx.MetaData.InsertOnSubmit(metadata);
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| 235 | ctx.SubmitChanges();
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| 236 | } else if (md.Count() == 1)
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| 237 | metadata = md.Single();
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| 238 | else
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| 239 | throw new ArgumentException("Could not get metadata. More than one metadata with the name " + metaDataName + " are saved in database.");
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| 240 | }
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| 241 | return metadata;
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[2190] | 242 | }
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| 243 |
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| 244 | public IEnumerable<IModelResult> GetModelResults(IModel model) {
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[2382] | 245 | return ctx.ModelResults.Where(mr => mr.Model == model).Cast<IModelResult>();
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[2190] | 246 | }
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[2205] | 247 | public IEnumerable<IInputVariableResult> GetInputVariableResults(IModel model) {
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[2382] | 248 | return ctx.InputVariableResults.Where(ivr => ivr.Model == model).Cast<IInputVariableResult>();
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[2205] | 249 | }
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[2355] | 250 | public IEnumerable<IModelMetaData> GetModelMetaData(IModel model) {
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[2382] | 251 | return ctx.ModelMetaData.Where(md => md.Model == model).Cast<IModelMetaData>();
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[2355] | 252 | }
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| 253 |
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[2382] | 254 | public IModelResult CreateModelResult(IModel model, IResult result, double value) {
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| 255 | Model m = (Model)model;
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| 256 | Result r = (Result)result;
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| 257 | return new ModelResult(m, r, value);
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[2355] | 258 | }
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| 259 |
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[2382] | 260 | public void PersistModelResults(IModel model,IEnumerable<IModelResult> modelResults) {
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[2355] | 261 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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[2382] | 262 | ctx.ModelResults.DeleteAllOnSubmit(GetModelResults(model).Cast<ModelResult>());
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| 263 | ctx.ModelResults.InsertAllOnSubmit(modelResults.Cast<ModelResult>());
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| 264 | ctx.SubmitChanges();
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[2355] | 265 | }
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| 266 | }
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| 267 |
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[2384] | 268 | public IInputVariable CreateInputVariable(IModel model, IVariable variable) {
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| 269 | InputVariable inputVariable = new InputVariable((Model)model, (Variable)variable);
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| 270 | return inputVariable;
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| 271 | }
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| 272 |
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[2382] | 273 | public IInputVariableResult CreateInputVariableResult(IInputVariable inputVariable, IResult result, double value) {
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| 274 | InputVariable i = (InputVariable)inputVariable;
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| 275 | Result r = (Result)result;
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| 276 | return new InputVariableResult(i, r, value);
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| 277 | }
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[2355] | 278 |
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[2382] | 279 | public void PersistInputVariableResults(IModel model,IEnumerable<IInputVariableResult> inputVariableResults) {
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| 280 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 281 | ctx.InputVariableResults.DeleteAllOnSubmit(GetInputVariableResults(model).Cast<InputVariableResult>());
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| 282 | ctx.InputVariableResults.InsertAllOnSubmit(inputVariableResults.Cast<InputVariableResult>());
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| 283 | ctx.SubmitChanges();
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| 284 | }
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[2190] | 285 | }
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[2217] | 286 |
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[2382] | 287 | public IModelMetaData CreateModelMetaData(IModel model, IMetaData metadata, double value) {
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[2326] | 288 | Model m = (Model)model;
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[2382] | 289 | MetaData md = (MetaData)metadata;
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| 290 | return new ModelMetaData(m, md, value);
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[2326] | 291 | }
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| 292 |
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[2382] | 293 | public void PersistModelMetaData(IModel model, IEnumerable<IModelMetaData> modelMetaData) {
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| 294 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 295 | ctx.ModelMetaData.DeleteAllOnSubmit(GetModelMetaData(model).Cast<ModelMetaData>());
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| 296 | ctx.ModelMetaData.InsertAllOnSubmit(modelMetaData.Cast<ModelMetaData>());
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| 297 | ctx.SubmitChanges();
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| 298 | }
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[2217] | 299 | }
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[2292] | 300 |
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[2382] | 301 | public IModel Persist(HeuristicLab.Modeling.IAlgorithm algorithm) {
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| 302 | if (ctx.Problems.Count() == 0)
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| 303 | PersistProblem(algorithm.Dataset);
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| 304 | return Persist(algorithm.Model, algorithm.Name, algorithm.Description);
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[2326] | 305 | }
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| 306 |
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[2382] | 307 | public IModel Persist(HeuristicLab.Modeling.IAnalyzerModel model, string algorithmName, string algorithmDescription) {
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| 308 | Algorithm algorithm = (Algorithm) GetOrPersistAlgorithm(algorithmName);
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| 309 | Variable targetVariable = (Variable)GetVariable (model.TargetVariable);
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| 310 |
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| 311 | Model m = (Model)CreateModel(model.Type, algorithm, targetVariable, model.TrainingSamplesStart, model.TrainingSamplesEnd,
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| 312 | model.ValidationSamplesStart, model.ValidationSamplesEnd, model.TestSamplesStart, model.TestSamplesEnd);
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| 313 | PersistModel(m);
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| 314 | PersistPredictor(m, model.Predictor);
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| 315 |
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| 316 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 317 | foreach (KeyValuePair<string, double> pair in model.MetaData) {
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| 318 | MetaData metaData = (MetaData)GetOrPersistMetaData(pair.Key);
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| 319 | ctx.ModelMetaData.InsertOnSubmit(new ModelMetaData(m, metaData, pair.Value));
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| 320 | }
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| 321 | ctx.SubmitChanges();
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| 322 | }
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| 323 |
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| 324 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 325 | foreach (KeyValuePair<ModelingResult, double> pair in model.Results) {
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| 326 | Result result = (Result)GetOrPersistResult(pair.Key.ToString());
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| 327 | ctx.ModelResults.InsertOnSubmit(new ModelResult(m, result, pair.Value));
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| 328 | }
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| 329 | ctx.SubmitChanges();
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| 330 | }
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| 331 |
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| 332 | using (ModelingDataContext ctx = new ModelingDataContext(connection)) {
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| 333 | foreach (InputVariable variable in ctx.InputVariables.Where(iv => iv.Model == m)) {
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| 334 | foreach (KeyValuePair<ModelingResult, double> variableResult in model.GetVariableResults(variable.Variable.Name)) {
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| 335 | Result result = (Result)GetOrPersistResult(variableResult.Key.ToString());
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| 336 | ctx.InputVariableResults.InsertOnSubmit(new InputVariableResult(variable, result, variableResult.Value));
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| 337 | }
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| 338 | }
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| 339 | ctx.SubmitChanges();
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| 340 | }
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| 341 |
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| 342 | //if connected to database return inserted model
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| 343 | if (this.ctx != null)
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| 344 | return this.ctx.Models.Where(x => x.Id == m.Id).Single();
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| 345 | return null;
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[2292] | 346 | }
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[2185] | 347 | }
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| 348 | }
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