[645] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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| 23 | using System.Collections.Generic;
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| 24 | using System.Linq;
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| 25 | using System.Text;
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| 26 | using HeuristicLab.Core;
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| 27 | using HeuristicLab.Operators;
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| 28 | using HeuristicLab.Random;
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| 29 | using HeuristicLab.Data;
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| 30 | using HeuristicLab.Constraints;
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| 31 | using System.Diagnostics;
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| 32 |
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| 33 | namespace HeuristicLab.GP {
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| 34 | /// <summary>
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| 35 | /// Implementation of a size fair crossover operator as described in:
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| 36 | /// William B. Langdon
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| 37 | /// Size Fair and Homologous Tree Genetic Programming Crossovers,
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| 38 | /// Genetic Programming and Evolvable Machines, Vol. 1, Number 1/2, pp. 95-119, April 2000
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| 39 | /// </summary>
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[835] | 40 | public class SizeFairCrossOver : SizeConstrictedGPCrossoverBase {
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[645] | 41 | private const int MAX_RECOMBINATION_TRIES = 20;
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[835] | 42 | // private data structure for crossover points
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| 43 | protected class CrossoverPoint {
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| 44 | public IFunctionTree tree;
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| 45 | public int branchSize;
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| 46 | public List<int> trail;
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[645] | 47 | }
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| 48 |
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[835] | 49 | internal override IFunctionTree Cross(TreeGardener gardener, MersenneTwister random, IFunctionTree tree0, IFunctionTree tree1, int maxTreeSize, int maxTreeHeight) {
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[833] | 50 | int tries = 0;
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| 51 | IFunctionTree insertedBranch = null;
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[835] | 52 | IFunctionTree parent = null;
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[833] | 53 | int removedBranchIndex = 0;
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| 54 | do {
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| 55 | // select a random suboperator of the 'receiving' tree
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[835] | 56 | while (parent == null) parent = gardener.GetRandomParentNode(tree0);
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| 57 | removedBranchIndex = random.Next(parent.SubTrees.Count);
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| 58 | insertedBranch = GetReplacementBranch(random, gardener, tree0, parent, removedBranchIndex, tree1, maxTreeSize, maxTreeHeight);
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| 59 | } while (insertedBranch == null && tries++ < MAX_RECOMBINATION_TRIES);
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[645] | 60 |
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[835] | 61 | if (insertedBranch != null) {
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[814] | 62 | // replace the branch below the crossoverpoint with the selected branch from root1
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[835] | 63 | parent.RemoveSubTree(removedBranchIndex);
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| 64 | parent.InsertSubTree(removedBranchIndex, insertedBranch);
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[814] | 65 | }
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[833] | 66 | return tree0;
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[645] | 67 | }
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| 68 |
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[835] | 69 | private IFunctionTree GetReplacementBranch(MersenneTwister random, TreeGardener gardener, IFunctionTree intoTree, IFunctionTree parent, int replacedBranchIndex, IFunctionTree fromTree, int maxTreeSize, int maxTreeHeight) {
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| 70 | IList<IFunction> allowedFunctions = gardener.GetAllowedSubFunctions(parent.Function, replacedBranchIndex);
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| 71 | int removedBranchSize = parent.SubTrees[replacedBranchIndex].Size;
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| 72 | int maxBranchSize = maxTreeSize - (intoTree.Size - removedBranchSize);
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| 73 | int maxBranchHeight = maxTreeHeight - gardener.GetBranchLevel(intoTree, parent); // returns 1 if intoTree==parent and 2 if parent is a child of intoTree
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| 74 | List<int> replacedTrail = GetTrail(intoTree, parent);
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| 75 | replacedTrail.Add(replacedBranchIndex);
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[645] | 76 |
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[835] | 77 | List<CrossoverPoint> shorterBranches = new List<CrossoverPoint>();
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| 78 | List<CrossoverPoint> longerBranches = new List<CrossoverPoint>();
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| 79 | List<CrossoverPoint> equalLengthBranches = new List<CrossoverPoint>();
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[645] | 80 |
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[835] | 81 | FindPossibleBranches(fromTree, allowedFunctions, maxBranchSize, maxBranchHeight, removedBranchSize, shorterBranches, equalLengthBranches, longerBranches, new List<int>());
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| 82 |
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| 83 | if (shorterBranches.Count > 0 && longerBranches.Count > 0) {
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| 84 | double pEqualLength = equalLengthBranches.Count > 0 ? 1.0 / removedBranchSize : 0.0;
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| 85 | double pLonger = (1.0 - pEqualLength) / (longerBranches.Count * (1.0 + longerBranches.Average(p => p.branchSize) / shorterBranches.Average(p => p.branchSize)));
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[645] | 86 | double pShorter = (1.0 - pEqualLength - pLonger);
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| 87 |
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| 88 | double r = random.NextDouble();
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[835] | 89 | if (r < pLonger) {
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| 90 | return SelectReplacement(random, replacedTrail, longerBranches);
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| 91 | } else if (r < pLonger + pShorter) {
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| 92 | return SelectReplacement(random, replacedTrail, shorterBranches);
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[645] | 93 | } else {
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[835] | 94 | return SelectReplacement(random, replacedTrail, equalLengthBranches);
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[645] | 95 | }
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[835] | 96 | } else if (equalLengthBranches.Count > 0) {
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| 97 | return SelectReplacement(random, replacedTrail, equalLengthBranches);
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| 98 | } else {
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| 99 | return null;
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[645] | 100 | }
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| 101 | }
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[835] | 102 |
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| 103 | protected virtual IFunctionTree SelectReplacement(MersenneTwister random, List<int> replacedTrail, List<CrossoverPoint> crossoverPoints) {
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| 104 | return crossoverPoints[random.Next(crossoverPoints.Count)].tree;
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| 105 | }
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| 106 |
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| 107 | private void FindPossibleBranches(IFunctionTree tree, IList<IFunction> allowedFunctions, int maxBranchSize, int maxBranchHeight, int removedBranchSize,
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| 108 | List<CrossoverPoint> shorterBranches, List<CrossoverPoint> equalLengthBranches, List<CrossoverPoint> longerBranches, List<int> trail) {
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| 109 | int treeSize = tree.Size;
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| 110 | if (allowedFunctions.Contains(tree.Function) && treeSize <= maxBranchSize && tree.Height <= maxBranchHeight) {
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| 111 | CrossoverPoint p = new CrossoverPoint();
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| 112 | p.branchSize = treeSize;
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| 113 | p.tree = tree;
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| 114 | p.trail = new List<int>(trail);
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| 115 | if (treeSize < removedBranchSize) shorterBranches.Add(p);
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| 116 | else if (treeSize > removedBranchSize) longerBranches.Add(p);
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| 117 | else equalLengthBranches.Add(p);
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| 118 | }
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| 119 | for (int i = 0; i < tree.SubTrees.Count; i++) {
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| 120 | trail.Add(i);
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| 121 | FindPossibleBranches(tree.SubTrees[i], allowedFunctions, maxBranchSize, maxBranchHeight, removedBranchSize, shorterBranches, equalLengthBranches, longerBranches, trail);
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| 122 | trail.RemoveAt(trail.Count - 1);
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| 123 | }
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| 124 | }
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| 125 |
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| 126 | private List<int> GetTrail(IFunctionTree root, IFunctionTree branch) {
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| 127 | List<int> trail = new List<int>();
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| 128 | GetTrail(root, branch, trail);
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| 129 | trail.Reverse();
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| 130 | trail.RemoveAt(trail.Count - 1);
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| 131 | return trail;
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| 132 | }
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| 133 | private void GetTrail(IFunctionTree root, IFunctionTree branch, List<int> trail) {
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| 134 | if (root == branch) {
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| 135 | trail.Add(-1); // add flag that there was a match
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| 136 | return;
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| 137 | }
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| 138 |
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| 139 | for (int i = 0; i < root.SubTrees.Count; i++) {
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| 140 | GetTrail(root.SubTrees[i], branch, trail);
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| 141 | if (trail.Count>0) {
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| 142 | trail.Add(i);
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| 143 | return;
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| 144 | }
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| 145 | }
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| 146 | }
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[645] | 147 | }
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| 148 | }
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