[645] | 1 | #region License Information
|
---|
| 2 | /* HeuristicLab
|
---|
| 3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
| 4 | *
|
---|
| 5 | * This file is part of HeuristicLab.
|
---|
| 6 | *
|
---|
| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
| 8 | * it under the terms of the GNU General Public License as published by
|
---|
| 9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
| 10 | * (at your option) any later version.
|
---|
| 11 | *
|
---|
| 12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
| 15 | * GNU General Public License for more details.
|
---|
| 16 | *
|
---|
| 17 | * You should have received a copy of the GNU General Public License
|
---|
| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
| 19 | */
|
---|
| 20 | #endregion
|
---|
| 21 |
|
---|
| 22 | using System;
|
---|
| 23 | using System.Collections.Generic;
|
---|
| 24 | using HeuristicLab.Core;
|
---|
| 25 | using HeuristicLab.Data;
|
---|
| 26 | using HeuristicLab.Operators;
|
---|
| 27 | using HeuristicLab.Random;
|
---|
| 28 | using System.Diagnostics;
|
---|
| 29 |
|
---|
| 30 | namespace HeuristicLab.GP {
|
---|
| 31 | public class DeleteSubTreeManipulation : OperatorBase {
|
---|
| 32 | public override string Description {
|
---|
| 33 | get {
|
---|
| 34 | return @"Deletes a random sub-tree of the input tree. If the remaining tree is not valid
|
---|
| 35 | the operator tries to fix the tree by generating random subtrees where necessary.";
|
---|
| 36 | }
|
---|
| 37 | }
|
---|
| 38 |
|
---|
| 39 | public DeleteSubTreeManipulation()
|
---|
| 40 | : base() {
|
---|
| 41 | AddVariableInfo(new VariableInfo("Random", "Uniform random number generator", typeof(MersenneTwister), VariableKind.In));
|
---|
| 42 | AddVariableInfo(new VariableInfo("OperatorLibrary", "The operator library containing all available operators", typeof(GPOperatorLibrary), VariableKind.In));
|
---|
| 43 | AddVariableInfo(new VariableInfo("MaxTreeHeight", "The maximal allowed height of the tree", typeof(IntData), VariableKind.In));
|
---|
| 44 | AddVariableInfo(new VariableInfo("MaxTreeSize", "The maximal allowed size (number of nodes) of the tree", typeof(IntData), VariableKind.In));
|
---|
| 45 | AddVariableInfo(new VariableInfo("FunctionTree", "The tree to mutate", typeof(IFunctionTree), VariableKind.In | VariableKind.Out));
|
---|
| 46 | AddVariableInfo(new VariableInfo("TreeSize", "The size (number of nodes) of the tree", typeof(IntData), VariableKind.In | VariableKind.Out));
|
---|
| 47 | AddVariableInfo(new VariableInfo("TreeHeight", "The height of the tree", typeof(IntData), VariableKind.In | VariableKind.Out));
|
---|
| 48 | }
|
---|
| 49 |
|
---|
| 50 |
|
---|
| 51 | public override IOperation Apply(IScope scope) {
|
---|
| 52 | IFunctionTree root = GetVariableValue<IFunctionTree>("FunctionTree", scope, true);
|
---|
| 53 | MersenneTwister random = GetVariableValue<MersenneTwister>("Random", scope, true);
|
---|
| 54 | GPOperatorLibrary library = GetVariableValue<GPOperatorLibrary>("OperatorLibrary", scope, true);
|
---|
| 55 | TreeGardener gardener = new TreeGardener(random, library);
|
---|
| 56 | IFunctionTree parent = gardener.GetRandomParentNode(root);
|
---|
| 57 |
|
---|
| 58 | // parent==null means the whole tree should be deleted.
|
---|
| 59 | // => return a new minimal random tree
|
---|
| 60 | if(parent == null) {
|
---|
| 61 | IFunctionTree newTree = gardener.CreateBalancedRandomTree(1, 1);
|
---|
| 62 | // check if the tree is ok
|
---|
| 63 | Debug.Assert(gardener.IsValidTree(newTree));
|
---|
| 64 | // update sizes to match the new tree
|
---|
| 65 | GetVariableValue<IntData>("TreeSize", scope, true).Data = newTree.Size;
|
---|
| 66 | GetVariableValue<IntData>("TreeHeight", scope, true).Data = newTree.Height;
|
---|
| 67 | scope.GetVariable(scope.TranslateName("FunctionTree")).Value = newTree;
|
---|
| 68 |
|
---|
| 69 | // schedule an operation to initialize the newly created operator
|
---|
| 70 | return gardener.CreateInitializationOperation(gardener.GetAllSubTrees(newTree), scope);
|
---|
| 71 | }
|
---|
| 72 |
|
---|
| 73 | // select a branch to prune
|
---|
| 74 | int childIndex = random.Next(parent.SubTrees.Count);
|
---|
| 75 | if(parent.SubTrees.Count > parent.Function.MinArity) {
|
---|
| 76 | parent.RemoveSubTree(childIndex);
|
---|
| 77 | // actually since the next sub-trees are shifted in the place of the removed branch
|
---|
| 78 | // it might be possible that these sub-trees are not allowed in the place of the old branch
|
---|
| 79 | // we ignore this problem for now.
|
---|
| 80 | // when this starts to become a problem a possible solution is to go through the shifted branches from the place of the shifted
|
---|
| 81 | // and find the first one that doesn't fit. At this position we insert a new randomly initialized subtree of matching type (gkronber 25.12.07)
|
---|
| 82 |
|
---|
| 83 | Debug.Assert(gardener.IsValidTree(root));
|
---|
| 84 | GetVariableValue<IntData>("TreeSize", scope, true).Data = root.Size;
|
---|
| 85 | GetVariableValue<IntData>("TreeHeight", scope, true).Data = root.Height;
|
---|
| 86 | // root hasn't changed so don't need to update 'FunctionTree' variable
|
---|
| 87 | return null;
|
---|
| 88 | } else {
|
---|
| 89 | // replace with a minimal random seedling
|
---|
| 90 | parent.RemoveSubTree(childIndex);
|
---|
| 91 | ICollection<IFunction> allowedFunctions = gardener.GetAllowedSubFunctions(parent.Function, childIndex);
|
---|
| 92 | IFunctionTree newFunctionTree = gardener.CreateRandomTree(allowedFunctions, 1, 1);
|
---|
| 93 | parent.InsertSubTree(childIndex, newFunctionTree);
|
---|
| 94 | Debug.Assert(gardener.IsValidTree(root));
|
---|
| 95 | GetVariableValue<IntData>("TreeSize", scope, true).Data = root.Size;
|
---|
| 96 | GetVariableValue<IntData>("TreeHeight", scope, true).Data = root.Height;
|
---|
| 97 | // again the root hasn't changed so we don't need to update the 'FunctionTree' variable
|
---|
| 98 | // but we have to return an initialization operation for the newly created tree
|
---|
| 99 | return gardener.CreateInitializationOperation(gardener.GetAllSubTrees(newFunctionTree), scope);
|
---|
| 100 | }
|
---|
| 101 | }
|
---|
| 102 | }
|
---|
| 103 | }
|
---|