1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using HeuristicLab.Core;
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23 | using HeuristicLab.Operators;
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24 | using HeuristicLab.Selection;
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25 | using HeuristicLab.Logging;
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26 | using HeuristicLab.Data;
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27 | using HeuristicLab.GP.Operators;
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28 | using HeuristicLab.Modeling;
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29 | using System.Collections.Generic;
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30 | using System;
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31 | using HeuristicLab.DataAnalysis;
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32 |
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33 | namespace HeuristicLab.GP.StructureIdentification {
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34 | public class StandardGPRegression : HeuristicLab.GP.Algorithms.StandardGP, IAlgorithm {
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35 |
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36 | public override string Name { get { return "StandardGP - StructureIdentification"; } }
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37 |
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38 | public virtual int TargetVariable {
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39 | get { return ProblemInjector.GetVariableValue<IntData>("TargetVariable", null, false).Data; }
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40 | set { ProblemInjector.GetVariableValue<IntData>("TargetVariable", null, false).Data = value; }
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41 | }
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42 |
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43 | public virtual Dataset Dataset {
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44 | get { return ProblemInjector.GetVariableValue<Dataset>("Dataset", null, false); }
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45 | set { ProblemInjector.GetVariable("Dataset").Value = value; }
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46 | }
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47 |
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48 | public virtual IAnalyzerModel Model {
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49 | get {
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50 | if (!Engine.Terminated)
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51 | throw new InvalidOperationException("The algorithm is still running. Wait until the algorithm is terminated to retrieve the result.");
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52 | else
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53 | return CreateGPModel();
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54 | }
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55 | }
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56 |
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57 | public virtual double PunishmentFactor {
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58 | get { return GetVariableInjector().GetVariable("PunishmentFactor").GetValue<DoubleData>().Data; }
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59 | set { GetVariableInjector().GetVariable("PunishmentFactor").GetValue<DoubleData>().Data = value; }
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60 | }
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61 |
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62 | public override IOperator ProblemInjector {
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63 | get { return GetProblemInjector().OperatorGraph.InitialOperator.SubOperators[0]; }
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64 | set {
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65 | value.Name = "ProblemInjector";
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66 | CombinedOperator problemInjector = GetProblemInjector();
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67 | problemInjector.OperatorGraph.RemoveOperator(ProblemInjector.Guid);
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68 | problemInjector.OperatorGraph.AddOperator(value);
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69 | problemInjector.OperatorGraph.InitialOperator.AddSubOperator(value, 0);
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70 | }
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71 | }
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72 |
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73 | public StandardGPRegression()
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74 | : base() {
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75 |
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76 | PunishmentFactor = 10.0;
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77 | }
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78 |
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79 | protected override IOperator CreateFunctionLibraryInjector() {
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80 | return DefaultStructureIdentificationOperators.CreateFunctionLibraryInjector();
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81 | }
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82 |
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83 | protected override IOperator CreateProblemInjector() {
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84 | return DefaultRegressionOperators.CreateProblemInjector();
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85 | }
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86 |
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87 | protected override IOperator CreateInitialPopulationEvaluator() {
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88 | return DefaultStructureIdentificationOperators.CreateInitialPopulationEvaluator();
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89 | }
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90 |
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91 | protected override IOperator CreateEvaluationOperator() {
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92 | return DefaultStructureIdentificationOperators.CreateEvaluator();
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93 | }
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94 |
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95 |
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96 | protected override IOperator CreateGenerationStepHook() {
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97 | return DefaultStructureIdentificationOperators.CreateGenerationStepHook();
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98 | }
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99 |
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100 | protected override VariableInjector CreateGlobalInjector() {
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101 | VariableInjector injector = base.CreateGlobalInjector();
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102 | injector.AddVariable(new HeuristicLab.Core.Variable("PunishmentFactor", new DoubleData()));
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103 | return injector;
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104 | }
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105 |
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106 | protected override IOperator CreateLoggingOperator() {
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107 | CombinedOperator loggingOperator = new CombinedOperator();
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108 | loggingOperator.Name = "Logging";
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109 | SequentialProcessor seq = new SequentialProcessor();
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110 |
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111 | DataCollector collector = new DataCollector();
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112 | ItemList<StringData> names = collector.GetVariable("VariableNames").GetValue<ItemList<StringData>>();
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113 | names.Add(new StringData("BestQuality"));
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114 | names.Add(new StringData("AverageQuality"));
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115 | names.Add(new StringData("WorstQuality"));
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116 | names.Add(new StringData("BestValidationQuality"));
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117 | names.Add(new StringData("AverageValidationQuality"));
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118 | names.Add(new StringData("WorstValidationQuality"));
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119 | names.Add(new StringData("EvaluatedSolutions"));
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120 | QualityLogger qualityLogger = new QualityLogger();
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121 | QualityLogger validationQualityLogger = new QualityLogger();
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122 | validationQualityLogger.GetVariableInfo("Quality").ActualName = "ValidationQuality";
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123 | validationQualityLogger.GetVariableInfo("QualityLog").ActualName = "ValidationQualityLog";
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124 | seq.AddSubOperator(collector);
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125 | seq.AddSubOperator(qualityLogger);
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126 | seq.AddSubOperator(validationQualityLogger);
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127 |
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128 | loggingOperator.OperatorGraph.AddOperator(seq);
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129 | loggingOperator.OperatorGraph.InitialOperator = seq;
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130 | return loggingOperator;
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131 | }
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132 |
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133 | protected override IOperator CreatePostProcessingOperator() {
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134 | CombinedOperator op = new CombinedOperator();
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135 | op.Name = "ModelAnalyser";
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136 | SequentialProcessor seq = new SequentialProcessor();
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137 | seq.AddSubOperator(DefaultStructureIdentificationOperators.CreatePreparationForPostProcessingOperator());
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138 |
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139 | UniformSequentialSubScopesProcessor subScopesProc = new UniformSequentialSubScopesProcessor();
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140 | SequentialProcessor solutionProc = new SequentialProcessor();
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141 | solutionProc.AddSubOperator(CreateModelAnalyzerOperator());
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142 |
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143 | subScopesProc.AddSubOperator(solutionProc);
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144 | seq.AddSubOperator(subScopesProc);
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145 |
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146 | op.OperatorGraph.AddOperator(seq);
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147 | op.OperatorGraph.InitialOperator = seq;
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148 | return op;
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149 | }
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150 |
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151 | protected virtual IOperator CreateModelAnalyzerOperator() {
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152 | return DefaultRegressionOperators.CreatePostProcessingOperator();
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153 | }
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154 |
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155 | protected CombinedOperator GetProblemInjector() {
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156 | return (CombinedOperator)GetInitializationOperator().SubOperators[0];
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157 | }
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158 |
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159 | protected virtual IAnalyzerModel CreateGPModel() {
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160 | IScope bestModelScope = Engine.GlobalScope.SubScopes[0];
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161 | IAnalyzerModel model = new AnalyzerModel();
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162 | DefaultStructureIdentificationOperators.PopulateAnalyzerModel(bestModelScope, model);
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163 | DefaultRegressionOperators.PopulateAnalyzerModel(bestModelScope, model);
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164 | return model;
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165 | }
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166 | }
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167 | }
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