1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using System.Text;
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26 | using HeuristicLab.Core;
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27 | using HeuristicLab.DataAnalysis;
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28 | using HeuristicLab.Data;
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29 | using System.Xml;
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30 |
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31 | namespace HeuristicLab.Functions {
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32 | class BakedFunctionTree : ItemBase, IFunctionTree {
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33 | private List<int> code;
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34 | private List<double> data;
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35 |
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36 | public BakedFunctionTree() {
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37 | code = new List<int>();
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38 | data = new List<double>();
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39 | }
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40 |
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41 | internal BakedFunctionTree(IFunction function)
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42 | : this() {
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43 | code.Add(0);
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44 | code.Add(BakedTreeEvaluator.MapFunction(function));
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45 | code.Add(0);
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46 | treesExpanded = true;
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47 | subTrees = new List<IFunctionTree>();
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48 | variables = new List<IVariable>();
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49 | variablesExpanded = true;
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50 | foreach(IVariableInfo variableInfo in function.VariableInfos) {
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51 | if(variableInfo.Local) {
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52 | variables.Add((IVariable)function.GetVariable(variableInfo.FormalName).Clone());
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53 | }
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54 | }
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55 | }
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56 |
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57 | internal BakedFunctionTree(IFunctionTree tree)
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58 | : this() {
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59 | code.Add(0);
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60 | code.Add(BakedTreeEvaluator.MapFunction(tree.Function));
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61 | code.Add(tree.LocalVariables.Count);
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62 | foreach(IVariable variable in tree.LocalVariables) {
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63 | IItem value = variable.Value;
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64 | data.Add(GetDoubleValue(value));
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65 | }
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66 | foreach(IFunctionTree subTree in tree.SubTrees) {
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67 | AddSubTree(new BakedFunctionTree(subTree));
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68 | }
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69 | }
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70 |
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71 | private double GetDoubleValue(IItem value) {
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72 | if(value is DoubleData) {
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73 | return ((DoubleData)value).Data;
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74 | } else if(value is ConstrainedDoubleData) {
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75 | return ((ConstrainedDoubleData)value).Data;
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76 | } else if(value is IntData) {
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77 | return ((IntData)value).Data;
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78 | } else if(value is ConstrainedIntData) {
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79 | return ((ConstrainedIntData)value).Data;
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80 | } else throw new NotSupportedException("Invalid datatype of local variable for GP");
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81 | }
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82 |
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83 | private void BranchLength(int branchRoot, out int codeLength, out int dataLength) {
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84 | int arity = code[branchRoot];
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85 | int nLocalVariables = code[branchRoot + 2];
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86 | codeLength = 3;
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87 | dataLength = nLocalVariables;
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88 | int subBranchStart = branchRoot + codeLength;
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89 | for(int i = 0; i < arity; i++) {
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90 | int branchCodeLength;
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91 | int branchDataLength;
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92 | BranchLength(subBranchStart, out branchCodeLength, out branchDataLength);
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93 | subBranchStart += branchCodeLength;
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94 | codeLength += branchCodeLength;
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95 | dataLength += branchDataLength;
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96 | }
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97 | }
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98 |
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99 | private void FlattenTrees() {
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100 | if(treesExpanded) {
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101 | code[0] = subTrees.Count;
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102 | foreach(BakedFunctionTree subTree in subTrees) {
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103 | subTree.FlattenVariables();
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104 | subTree.FlattenTrees();
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105 | code.AddRange(subTree.code);
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106 | data.AddRange(subTree.data);
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107 | }
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108 | treesExpanded = false;
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109 | subTrees = null;
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110 | }
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111 | }
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112 |
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113 | private void FlattenVariables() {
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114 | if(variablesExpanded) {
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115 | code[2] = variables.Count;
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116 | foreach(IVariable variable in variables) {
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117 | data.Add(GetDoubleValue(variable.Value));
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118 | }
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119 | variablesExpanded = false;
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120 | variables = null;
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121 | }
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122 | }
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123 |
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124 | private bool treesExpanded = false;
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125 | private List<IFunctionTree> subTrees;
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126 | public IList<IFunctionTree> SubTrees {
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127 | get {
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128 | if(!treesExpanded) {
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129 | subTrees = new List<IFunctionTree>();
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130 | int arity = code[0];
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131 | int nLocalVariables = code[2];
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132 | int branchIndex = 3;
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133 | int dataIndex = nLocalVariables; // skip my local variables to reach the local variables of the first branch
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134 | for(int i = 0; i < arity; i++) {
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135 | BakedFunctionTree subTree = new BakedFunctionTree();
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136 | int codeLength;
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137 | int dataLength;
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138 | BranchLength(branchIndex, out codeLength, out dataLength);
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139 | subTree.code = code.GetRange(branchIndex, codeLength);
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140 | subTree.data = data.GetRange(dataIndex, dataLength);
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141 | branchIndex += codeLength;
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142 | dataIndex += dataLength;
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143 | subTrees.Add(subTree);
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144 | }
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145 | treesExpanded = true;
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146 | code.RemoveRange(3, code.Count - 3);
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147 | code[0] = 0;
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148 | data.RemoveRange(nLocalVariables, data.Count - nLocalVariables);
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149 | }
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150 | return subTrees;
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151 | }
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152 | }
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153 |
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154 | private bool variablesExpanded = false;
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155 | private List<IVariable> variables;
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156 | public ICollection<IVariable> LocalVariables {
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157 | get {
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158 | if(!variablesExpanded) {
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159 | variables = new List<IVariable>();
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160 | IFunction function = BakedTreeEvaluator.MapSymbol(code[1]);
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161 | int localVariableIndex = 0;
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162 | foreach(IVariableInfo variableInfo in function.VariableInfos) {
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163 | if(variableInfo.Local) {
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164 | IVariable clone = (IVariable)function.GetVariable(variableInfo.FormalName).Clone();
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165 | IItem value = clone.Value;
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166 | if(value is ConstrainedDoubleData) {
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167 | ((ConstrainedDoubleData)value).Data = data[localVariableIndex];
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168 | } else if(value is ConstrainedIntData) {
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169 | ((ConstrainedIntData)value).Data = (int)data[localVariableIndex];
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170 | } else if(value is DoubleData) {
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171 | ((DoubleData)value).Data = data[localVariableIndex];
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172 | } else if(value is IntData) {
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173 | ((IntData)value).Data = (int)data[localVariableIndex];
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174 | } else throw new NotSupportedException("Invalid local variable type for GP.");
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175 | variables.Add(clone);
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176 | localVariableIndex++;
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177 | }
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178 | }
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179 | variablesExpanded = true;
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180 | code[2] = 0;
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181 | data.RemoveRange(0, variables.Count);
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182 | }
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183 | return variables;
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184 | }
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185 | }
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186 |
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187 | public IFunction Function {
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188 | get { return BakedTreeEvaluator.MapSymbol(code[1]); }
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189 | }
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190 |
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191 | public IVariable GetLocalVariable(string name) {
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192 | foreach(IVariable var in LocalVariables) {
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193 | if(var.Name == name) return var;
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194 | }
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195 | return null;
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196 | }
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197 |
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198 | public void AddVariable(IVariable variable) {
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199 | throw new NotSupportedException();
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200 | }
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201 |
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202 | public void RemoveVariable(string name) {
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203 | throw new NotSupportedException();
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204 | }
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205 |
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206 | public void AddSubTree(IFunctionTree tree) {
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207 | if(!treesExpanded) throw new InvalidOperationException();
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208 | subTrees.Add(tree);
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209 | }
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210 |
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211 | public void InsertSubTree(int index, IFunctionTree tree) {
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212 | if(!treesExpanded) throw new InvalidOperationException();
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213 | subTrees.Insert(index, tree);
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214 | }
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215 |
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216 | public void RemoveSubTree(int index) {
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217 | // sanity check
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218 | if(!treesExpanded) throw new InvalidOperationException();
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219 | subTrees.RemoveAt(index);
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220 | }
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221 |
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222 | private BakedTreeEvaluator evaluator;
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223 | public double Evaluate(Dataset dataset, int sampleIndex) {
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224 | FlattenVariables();
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225 | FlattenTrees();
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226 | if(evaluator == null) evaluator = new BakedTreeEvaluator(code, data);
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227 | return evaluator.Evaluate(dataset, sampleIndex);
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228 | }
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229 |
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230 |
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231 | public override XmlNode GetXmlNode(string name, XmlDocument document, IDictionary<Guid, IStorable> persistedObjects) {
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232 | XmlNode node = base.GetXmlNode(name, document, persistedObjects);
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233 | node.AppendChild(PersistenceManager.Persist("Function", Function, document, persistedObjects));
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234 | XmlNode subTreesNode = document.CreateNode(XmlNodeType.Element, "SubTrees", null);
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235 | for(int i = 0; i < SubTrees.Count; i++)
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236 | subTreesNode.AppendChild(PersistenceManager.Persist(SubTrees[i], document, persistedObjects));
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237 | node.AppendChild(subTreesNode);
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238 | XmlNode variablesNode = document.CreateNode(XmlNodeType.Element, "Variables", null);
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239 | foreach(IVariable variable in LocalVariables)
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240 | variablesNode.AppendChild(PersistenceManager.Persist(variable, document, persistedObjects));
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241 | node.AppendChild(variablesNode);
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242 | return node;
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243 | }
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244 |
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245 | public override void Populate(XmlNode node, IDictionary<Guid, IStorable> restoredObjects) {
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246 | base.Populate(node, restoredObjects);
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247 | IFunction function = (IFunction)PersistenceManager.Restore(node.SelectSingleNode("Function"), restoredObjects);
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248 | code.Add(0);
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249 | code.Add(BakedTreeEvaluator.MapFunction(function));
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250 | code.Add(0);
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251 | treesExpanded = true;
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252 | subTrees = new List<IFunctionTree>();
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253 | variables = new List<IVariable>();
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254 | variablesExpanded = true;
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255 | XmlNode subTreesNode = node.SelectSingleNode("SubTrees");
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256 | for(int i = 0; i < subTreesNode.ChildNodes.Count; i++)
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257 | subTrees.Add((IFunctionTree)PersistenceManager.Restore(subTreesNode.ChildNodes[i], restoredObjects));
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258 | XmlNode variablesNode = node.SelectSingleNode("Variables");
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259 | foreach(XmlNode variableNode in variablesNode.ChildNodes)
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260 | variables.Add((IVariable)PersistenceManager.Restore(variableNode, restoredObjects));
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261 | }
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262 |
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263 | public override object Clone(IDictionary<Guid, object> clonedObjects) {
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264 | BakedFunctionTree clone = new BakedFunctionTree();
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265 | // in case the user (de)serialized the tree between evaluation and selection we have to flatten the tree again.
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266 | if(treesExpanded) FlattenTrees();
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267 | if(variablesExpanded) FlattenVariables();
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268 | clone.code.AddRange(code);
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269 | clone.data.AddRange(data);
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270 | return clone;
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271 | }
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272 |
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273 | public override IView CreateView() {
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274 | return new FunctionTreeView(this);
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275 | }
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276 | }
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277 | }
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