[10163] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[14185] | 3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[10163] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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[10168] | 23 | using System.Collections;
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[10163] | 24 | using System.Collections.Generic;
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[11002] | 25 | using System.Globalization;
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| 26 | using System.Linq;
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[10185] | 27 | using HeuristicLab.Common;
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[10163] | 28 | using HeuristicLab.Core;
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[10994] | 29 | using HeuristicLab.Data;
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[10163] | 30 | using HeuristicLab.Problems.DataAnalysis;
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| 31 |
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[10182] | 32 | namespace HeuristicLab.DataPreprocessing {
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[10978] | 33 | [Item("PreprocessingData", "Represents data used for preprocessing.")]
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| 34 | public class TransactionalPreprocessingData : PreprocessingData, ITransactionalPreprocessingData {
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| 35 | private class Snapshot {
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| 36 | public IList<IList> VariableValues { get; set; }
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| 37 | public IList<string> VariableNames { get; set; }
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[10550] | 38 |
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[10994] | 39 | public IntRange TrainingPartition { get; set; }
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| 40 | public IntRange TestPartition { get; set; }
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[10978] | 41 | public IList<ITransformation> Transformations { get; set; }
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| 42 | public DataPreprocessingChangedEventType ChangedType { get; set; }
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[10550] | 43 |
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[10978] | 44 | public int ChangedColumn { get; set; }
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| 45 | public int ChangedRow { get; set; }
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| 46 | }
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[10814] | 47 |
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[10550] | 48 | private const int MAX_UNDO_DEPTH = 5;
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| 49 |
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[10978] | 50 | private readonly IList<Snapshot> undoHistory = new List<Snapshot>();
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| 51 | private readonly Stack<DataPreprocessingChangedEventType> eventStack = new Stack<DataPreprocessingChangedEventType>();
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[10550] | 52 |
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[10805] | 53 | public bool IsInTransaction { get { return eventStack.Count > 0; } }
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| 54 |
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[10609] | 55 | public TransactionalPreprocessingData(IDataAnalysisProblemData problemData)
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| 56 | : base(problemData) {
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[10185] | 57 | }
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[10187] | 58 |
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[11114] | 59 | protected TransactionalPreprocessingData(TransactionalPreprocessingData original, Cloner cloner)
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[10609] | 60 | : base(original, cloner) {
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[11068] | 61 | }
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[10163] | 62 |
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[10550] | 63 | private void SaveSnapshot(DataPreprocessingChangedEventType changedType, int column, int row) {
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[10978] | 64 | if (IsInTransaction) return;
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[10580] | 65 |
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[10814] | 66 | var currentSnapshot = new Snapshot {
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| 67 | VariableValues = CopyVariableValues(variableValues),
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| 68 | VariableNames = new List<string>(variableNames),
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[10994] | 69 | TrainingPartition = new IntRange(TrainingPartition.Start, TrainingPartition.End),
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| 70 | TestPartition = new IntRange(TestPartition.Start, TestPartition.End),
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[15110] | 71 | Transformations = new List<ITransformation>(Transformations),
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[10814] | 72 | ChangedType = changedType,
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| 73 | ChangedColumn = column,
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| 74 | ChangedRow = row
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| 75 | };
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[10550] | 76 |
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| 77 | if (undoHistory.Count >= MAX_UNDO_DEPTH)
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| 78 | undoHistory.RemoveAt(0);
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| 79 |
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| 80 | undoHistory.Add(currentSnapshot);
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| 81 | }
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| 82 |
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[10163] | 83 | #region NamedItem abstract Member Implementations
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[10185] | 84 | public override IDeepCloneable Clone(Cloner cloner) {
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[10586] | 85 | return new TransactionalPreprocessingData(this, cloner);
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[10163] | 86 | }
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| 87 | #endregion
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| 88 |
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[10586] | 89 | #region Overridden IPreprocessingData Members
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[11068] | 90 | public override T GetCell<T>(int columnIndex, int rowIndex) {
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[10991] | 91 | return (T)variableValues[columnIndex][rowIndex];
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| 92 | }
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| 93 |
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[10586] | 94 | public override void SetCell<T>(int columnIndex, int rowIndex, T value) {
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[10550] | 95 | SaveSnapshot(DataPreprocessingChangedEventType.ChangeItem, columnIndex, rowIndex);
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[12983] | 96 |
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| 97 | for (int i = Rows; i <= rowIndex; i++)
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| 98 | InsertRow(i);
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| 99 | for (int i = Columns; i <= columnIndex; i++)
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| 100 | InsertColumn<T>(i.ToString(), i);
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| 101 |
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[10991] | 102 | variableValues[columnIndex][rowIndex] = value;
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[10805] | 103 | if (!IsInTransaction)
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[10580] | 104 | OnChanged(DataPreprocessingChangedEventType.ChangeItem, columnIndex, rowIndex);
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[10367] | 105 | }
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| 106 |
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[11068] | 107 | public override string GetCellAsString(int columnIndex, int rowIndex) {
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[10991] | 108 | return variableValues[columnIndex][rowIndex].ToString();
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| 109 | }
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| 110 |
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[11068] | 111 | public override string GetVariableName(int columnIndex) {
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[10991] | 112 | return variableNames[columnIndex];
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| 113 | }
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| 114 |
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[11068] | 115 | public override int GetColumnIndex(string variableName) {
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[10991] | 116 | return variableNames.IndexOf(variableName);
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| 117 | }
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| 118 |
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[11156] | 119 | public override bool VariableHasType<T>(int columnIndex) {
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[12983] | 120 | return columnIndex >= variableValues.Count || variableValues[columnIndex] is List<T>;
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[10991] | 121 | }
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| 122 |
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| 123 | [Obsolete("use the index based variant, is faster")]
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[11068] | 124 | public override IList<T> GetValues<T>(string variableName, bool considerSelection) {
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[10991] | 125 | return GetValues<T>(GetColumnIndex(variableName), considerSelection);
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| 126 | }
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| 127 |
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[11068] | 128 | public override IList<T> GetValues<T>(int columnIndex, bool considerSelection) {
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| 129 | if (considerSelection) {
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[10991] | 130 | var list = new List<T>();
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[11068] | 131 | foreach (var rowIdx in selection[columnIndex]) {
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[10991] | 132 | list.Add((T)variableValues[columnIndex][rowIdx]);
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| 133 | }
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| 134 | return list;
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[11068] | 135 | } else {
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[10991] | 136 | return (IList<T>)variableValues[columnIndex];
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| 137 | }
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| 138 | }
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| 139 |
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[10586] | 140 | public override void SetValues<T>(int columnIndex, IList<T> values) {
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| 141 | SaveSnapshot(DataPreprocessingChangedEventType.ChangeColumn, columnIndex, -1);
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[11156] | 142 | if (VariableHasType<T>(columnIndex)) {
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[10991] | 143 | variableValues[columnIndex] = (IList)values;
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[11068] | 144 | } else {
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[10991] | 145 | throw new ArgumentException("The datatype of column " + columnIndex + " must be of type " + variableValues[columnIndex].GetType().Name + " but was " + typeof(T).Name);
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| 146 | }
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[10805] | 147 | if (!IsInTransaction)
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[10580] | 148 | OnChanged(DataPreprocessingChangedEventType.ChangeColumn, columnIndex, -1);
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[10181] | 149 | }
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| 150 |
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[11002] | 151 | public override bool SetValue(string value, int columnIndex, int rowIndex) {
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| 152 | bool valid = false;
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[11156] | 153 | if (VariableHasType<double>(columnIndex)) {
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[11002] | 154 | double val;
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| 155 | valid = double.TryParse(value, out val);
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| 156 | SetValueIfValid(columnIndex, rowIndex, valid, val);
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[11156] | 157 | } else if (VariableHasType<string>(columnIndex)) {
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[11002] | 158 | valid = value != null;
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| 159 | SetValueIfValid(columnIndex, rowIndex, valid, value);
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[11156] | 160 | } else if (VariableHasType<DateTime>(columnIndex)) {
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[11002] | 161 | DateTime date;
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| 162 | valid = DateTime.TryParse(value, out date);
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| 163 | SetValueIfValid(columnIndex, rowIndex, valid, date);
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| 164 | } else {
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| 165 | throw new ArgumentException("column " + columnIndex + " contains a non supported type.");
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| 166 | }
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| 167 |
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| 168 | if (!IsInTransaction)
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| 169 | OnChanged(DataPreprocessingChangedEventType.ChangeColumn, columnIndex, -1);
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| 170 |
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| 171 | return valid;
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| 172 | }
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[11068] | 173 |
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| 174 | public override bool Validate(string value, out string errorMessage, int columnIndex) {
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| 175 | if (columnIndex < 0 || columnIndex > VariableNames.Count()) {
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[11002] | 176 | throw new ArgumentOutOfRangeException("column index is out of range");
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| 177 | }
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| 178 |
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| 179 | bool valid = false;
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| 180 | errorMessage = string.Empty;
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[11156] | 181 | if (VariableHasType<double>(columnIndex)) {
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[11002] | 182 | double val;
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| 183 | valid = double.TryParse(value, out val);
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| 184 | if (!valid) {
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| 185 | errorMessage = "Invalid Value (Valid Value Format: \"" + FormatPatterns.GetDoubleFormatPattern() + "\")";
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| 186 | }
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[11156] | 187 | } else if (VariableHasType<string>(columnIndex)) {
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[11002] | 188 | valid = value != null;
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| 189 | if (!valid) {
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| 190 | errorMessage = "Invalid Value (string must not be null)";
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| 191 | }
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[11156] | 192 | } else if (VariableHasType<DateTime>(columnIndex)) {
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[11002] | 193 | DateTime date;
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| 194 | valid = DateTime.TryParse(value, out date);
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| 195 | if (!valid) {
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| 196 | errorMessage = "Invalid Value (Valid Value Format: \"" + CultureInfo.CurrentCulture.DateTimeFormat + "\"";
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| 197 | }
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| 198 | } else {
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| 199 | throw new ArgumentException("column " + columnIndex + " contains a non supported type.");
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| 200 | }
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| 201 |
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| 202 | return valid;
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| 203 | }
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| 204 |
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| 205 | private void SetValueIfValid<T>(int columnIndex, int rowIndex, bool valid, T value) {
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| 206 | if (valid)
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| 207 | SetCell<T>(columnIndex, rowIndex, value);
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| 208 | }
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| 209 |
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| 210 | public override bool AreAllStringColumns(IEnumerable<int> columnIndices) {
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[11156] | 211 | return columnIndices.All(x => VariableHasType<string>(x));
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[11002] | 212 | }
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| 213 |
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[10586] | 214 | public override void InsertRow(int rowIndex) {
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[10550] | 215 | SaveSnapshot(DataPreprocessingChangedEventType.DeleteRow, -1, rowIndex);
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[11068] | 216 | foreach (IList column in variableValues) {
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[10991] | 217 | Type type = column.GetType().GetGenericArguments()[0];
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| 218 | column.Insert(rowIndex, type.IsValueType ? Activator.CreateInstance(type) : null);
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| 219 | }
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[13517] | 220 | if (TrainingPartition.Start <= rowIndex && rowIndex <= TrainingPartition.End) {
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| 221 | TrainingPartition.End++;
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| 222 | if (TrainingPartition.End <= TestPartition.Start) {
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| 223 | TestPartition.Start++;
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| 224 | TestPartition.End++;
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| 225 | }
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| 226 | } else if (TestPartition.Start <= rowIndex && rowIndex <= TestPartition.End) {
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| 227 | TestPartition.End++;
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| 228 | if (TestPartition.End <= TrainingPartition.Start) {
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| 229 | TestPartition.Start++;
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| 230 | TestPartition.End++;
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| 231 | }
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| 232 | }
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[10805] | 233 | if (!IsInTransaction)
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[10580] | 234 | OnChanged(DataPreprocessingChangedEventType.AddRow, -1, rowIndex);
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[10163] | 235 | }
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[10586] | 236 | public override void DeleteRow(int rowIndex) {
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[10550] | 237 | SaveSnapshot(DataPreprocessingChangedEventType.AddRow, -1, rowIndex);
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[11068] | 238 | foreach (IList column in variableValues) {
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[10991] | 239 | column.RemoveAt(rowIndex);
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| 240 | }
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[13517] | 241 | if (TrainingPartition.Start <= rowIndex && rowIndex <= TrainingPartition.End) {
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| 242 | TrainingPartition.End--;
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| 243 | if (TrainingPartition.End <= TestPartition.Start) {
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| 244 | TestPartition.Start--;
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| 245 | TestPartition.End--;
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| 246 | }
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| 247 | } else if (TestPartition.Start <= rowIndex && rowIndex <= TestPartition.End) {
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| 248 | TestPartition.End--;
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| 249 | if (TestPartition.End <= TrainingPartition.Start) {
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| 250 | TestPartition.Start--;
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| 251 | TestPartition.End--;
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| 252 | }
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| 253 | }
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[10805] | 254 | if (!IsInTransaction)
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[10580] | 255 | OnChanged(DataPreprocessingChangedEventType.DeleteRow, -1, rowIndex);
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[10163] | 256 | }
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[13517] | 257 | public override void DeleteRowsWithIndices(IEnumerable<int> rows) {
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| 258 | SaveSnapshot(DataPreprocessingChangedEventType.AddRow, -1, -1);
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| 259 | foreach (int rowIndex in rows.OrderByDescending(x => x)) {
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| 260 | foreach (IList column in variableValues) {
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| 261 | column.RemoveAt(rowIndex);
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| 262 | }
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| 263 | if (TrainingPartition.Start <= rowIndex && rowIndex <= TrainingPartition.End) {
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| 264 | TrainingPartition.End--;
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| 265 | if (TrainingPartition.End <= TestPartition.Start) {
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| 266 | TestPartition.Start--;
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| 267 | TestPartition.End--;
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| 268 | }
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| 269 | } else if (TestPartition.Start <= rowIndex && rowIndex <= TestPartition.End) {
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| 270 | TestPartition.End--;
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| 271 | if (TestPartition.End <= TrainingPartition.Start) {
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| 272 | TestPartition.Start--;
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| 273 | TestPartition.End--;
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| 274 | }
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| 275 | }
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| 276 | }
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| 277 | if (!IsInTransaction)
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| 278 | OnChanged(DataPreprocessingChangedEventType.DeleteRow, -1, -1);
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| 279 | }
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[10163] | 280 |
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[10586] | 281 | public override void InsertColumn<T>(string variableName, int columnIndex) {
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[10550] | 282 | SaveSnapshot(DataPreprocessingChangedEventType.DeleteColumn, columnIndex, -1);
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[12983] | 283 | variableValues.Insert(columnIndex, new List<T>(Enumerable.Repeat(default(T), Rows)));
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[10991] | 284 | variableNames.Insert(columnIndex, variableName);
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[10805] | 285 | if (!IsInTransaction)
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[10580] | 286 | OnChanged(DataPreprocessingChangedEventType.AddColumn, columnIndex, -1);
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[10163] | 287 | }
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| 288 |
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[10586] | 289 | public override void DeleteColumn(int columnIndex) {
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[10550] | 290 | SaveSnapshot(DataPreprocessingChangedEventType.AddColumn, columnIndex, -1);
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[10991] | 291 | variableValues.RemoveAt(columnIndex);
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| 292 | variableNames.RemoveAt(columnIndex);
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[10805] | 293 | if (!IsInTransaction)
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[10580] | 294 | OnChanged(DataPreprocessingChangedEventType.DeleteColumn, columnIndex, -1);
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[10367] | 295 | }
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| 296 |
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[13252] | 297 | public override void RenameColumn(int columnIndex, string name) {
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| 298 | SaveSnapshot(DataPreprocessingChangedEventType.ChangeColumn, columnIndex, -1);
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| 299 | if (columnIndex < 0 || columnIndex > variableNames.Count)
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| 300 | throw new ArgumentOutOfRangeException("columnIndex");
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| 301 | variableNames[columnIndex] = name;
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| 302 |
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| 303 | if (!IsInTransaction)
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| 304 | OnChanged(DataPreprocessingChangedEventType.ChangeColumn, -1, -1);
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| 305 | }
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| 306 |
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| 307 | public override void RenameColumns(IList<string> names) {
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| 308 | if (names == null) throw new ArgumentNullException("names");
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| 309 | if (names.Count != variableNames.Count) throw new ArgumentException("number of names must match the number of columns.", "names");
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| 310 |
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| 311 | SaveSnapshot(DataPreprocessingChangedEventType.ChangeColumn, -1, -1);
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| 312 | for (int i = 0; i < names.Count; i++)
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| 313 | variableNames[i] = names[i];
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| 314 |
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| 315 | if (!IsInTransaction)
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| 316 | OnChanged(DataPreprocessingChangedEventType.ChangeColumn, -1, -1);
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| 317 | }
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| 318 |
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[11068] | 319 | public override Dataset ExportToDataset() {
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[10991] | 320 | IList<IList> values = new List<IList>();
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| 321 |
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[11068] | 322 | for (int i = 0; i < Columns; ++i) {
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[10991] | 323 | values.Add(variableValues[i]);
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| 324 | }
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| 325 |
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| 326 | var dataset = new Dataset(variableNames, values);
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| 327 | return dataset;
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| 328 | }
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| 329 |
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[11068] | 330 | public override void ClearSelection() {
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[10991] | 331 | Selection = new Dictionary<int, IList<int>>();
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| 332 | }
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| 333 |
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| 334 | public override event EventHandler SelectionChanged;
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| 335 |
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[11068] | 336 | protected override void OnSelectionChanged() {
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[10991] | 337 | var listeners = SelectionChanged;
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| 338 | if (listeners != null) listeners(this, EventArgs.Empty);
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| 339 | }
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[10586] | 340 | #endregion
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[10221] | 341 |
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[10586] | 342 | #region TransactionalPreprocessingData members
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[10547] | 343 | public bool IsUndoAvailable {
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[10550] | 344 | get { return undoHistory.Count > 0; }
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[10547] | 345 | }
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| 346 |
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| 347 | public void Undo() {
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[10550] | 348 | if (IsUndoAvailable) {
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[10814] | 349 | Snapshot previousSnapshot = undoHistory[undoHistory.Count - 1];
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[10550] | 350 | variableValues = previousSnapshot.VariableValues;
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| 351 | variableNames = previousSnapshot.VariableNames;
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[10994] | 352 | TrainingPartition = previousSnapshot.TrainingPartition;
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| 353 | TestPartition = previousSnapshot.TestPartition;
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[15110] | 354 | Transformations = previousSnapshot.Transformations;
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[10550] | 355 | undoHistory.Remove(previousSnapshot);
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| 356 | OnChanged(previousSnapshot.ChangedType,
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| 357 | previousSnapshot.ChangedColumn,
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| 358 | previousSnapshot.ChangedRow);
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| 359 | }
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[10547] | 360 | }
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| 361 |
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[10665] | 362 | public void InTransaction(Action action, DataPreprocessingChangedEventType type = DataPreprocessingChangedEventType.Any) {
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| 363 | BeginTransaction(type);
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[10612] | 364 | action();
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| 365 | EndTransaction();
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| 366 | }
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| 367 |
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[10665] | 368 | public void BeginTransaction(DataPreprocessingChangedEventType type) {
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| 369 | SaveSnapshot(type, -1, -1);
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[10805] | 370 | eventStack.Push(type);
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[10580] | 371 | }
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| 372 |
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| 373 | public void EndTransaction() {
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[10805] | 374 | if (eventStack.Count == 0)
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[10580] | 375 | throw new InvalidOperationException("There is no open transaction that can be ended.");
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[10814] | 376 |
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[10805] | 377 | var @event = eventStack.Pop();
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| 378 | OnChanged(@event, -1, -1);
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[10580] | 379 | }
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[10220] | 380 | #endregion
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[10163] | 381 | }
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| 382 | }
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