1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Linq;
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24 | using System.Runtime.CompilerServices;
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25 | using System.Threading;
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26 | using HeuristicLab.Algorithms.DataAnalysis.MctsSymbolicRegression.Policies;
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27 | using HeuristicLab.Analysis;
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28 | using HeuristicLab.Common;
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29 | using HeuristicLab.Core;
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30 | using HeuristicLab.Data;
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31 | using HeuristicLab.Optimization;
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32 | using HeuristicLab.Parameters;
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33 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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34 | using HeuristicLab.Problems.DataAnalysis;
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35 |
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36 | namespace HeuristicLab.Algorithms.DataAnalysis.MctsSymbolicRegression {
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37 | [Item("MCTS Symbolic Regression", "Monte carlo tree search for symbolic regression. Useful mainly as a base learner in gradient boosting.")]
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38 | [StorableClass]
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39 | [Creatable(CreatableAttribute.Categories.DataAnalysisRegression, Priority = 250)]
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40 | public class MctsSymbolicRegressionAlgorithm : BasicAlgorithm {
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41 | public override Type ProblemType {
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42 | get { return typeof(IRegressionProblem); }
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43 | }
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44 | public new IRegressionProblem Problem {
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45 | get { return (IRegressionProblem)base.Problem; }
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46 | set { base.Problem = value; }
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47 | }
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48 |
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49 | #region ParameterNames
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50 | private const string IterationsParameterName = "Iterations";
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51 | private const string MaxVariablesParameterName = "Maximum variables";
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52 | private const string ScaleVariablesParameterName = "Scale variables";
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53 | private const string AllowedFactorsParameterName = "Allowed factors";
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54 | private const string ConstantOptimizationIterationsParameterName = "Iterations (constant optimization)";
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55 | private const string PolicyParameterName = "Policy";
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56 | private const string SeedParameterName = "Seed";
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57 | private const string SetSeedRandomlyParameterName = "SetSeedRandomly";
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58 | private const string UpdateIntervalParameterName = "UpdateInterval";
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59 | private const string CreateSolutionParameterName = "CreateSolution";
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60 | private const string PunishmentFactorParameterName = "PunishmentFactor";
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61 |
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62 | private const string VariableProductFactorName = "product(xi)";
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63 | private const string ExpFactorName = "exp(c * product(xi))";
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64 | private const string LogFactorName = "log(c + sum(c*product(xi))";
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65 | private const string InvFactorName = "1 / (1 + sum(c*product(xi))";
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66 | private const string FactorSumsName = "sum of multiple terms";
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67 | #endregion
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68 |
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69 | #region ParameterProperties
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70 | public IFixedValueParameter<IntValue> IterationsParameter {
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71 | get { return (IFixedValueParameter<IntValue>)Parameters[IterationsParameterName]; }
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72 | }
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73 | public IFixedValueParameter<IntValue> MaxVariableReferencesParameter {
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74 | get { return (IFixedValueParameter<IntValue>)Parameters[MaxVariablesParameterName]; }
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75 | }
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76 | public IFixedValueParameter<BoolValue> ScaleVariablesParameter {
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77 | get { return (IFixedValueParameter<BoolValue>)Parameters[ScaleVariablesParameterName]; }
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78 | }
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79 | public IFixedValueParameter<IntValue> ConstantOptimizationIterationsParameter {
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80 | get { return (IFixedValueParameter<IntValue>)Parameters[ConstantOptimizationIterationsParameterName]; }
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81 | }
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82 | public IValueParameter<IPolicy> PolicyParameter {
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83 | get { return (IValueParameter<IPolicy>)Parameters[PolicyParameterName]; }
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84 | }
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85 | public IFixedValueParameter<DoubleValue> PunishmentFactorParameter {
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86 | get { return (IFixedValueParameter<DoubleValue>)Parameters[PunishmentFactorParameterName]; }
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87 | }
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88 | public IValueParameter<ICheckedItemList<StringValue>> AllowedFactorsParameter {
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89 | get { return (IValueParameter<ICheckedItemList<StringValue>>)Parameters[AllowedFactorsParameterName]; }
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90 | }
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91 | public IFixedValueParameter<IntValue> SeedParameter {
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92 | get { return (IFixedValueParameter<IntValue>)Parameters[SeedParameterName]; }
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93 | }
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94 | public FixedValueParameter<BoolValue> SetSeedRandomlyParameter {
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95 | get { return (FixedValueParameter<BoolValue>)Parameters[SetSeedRandomlyParameterName]; }
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96 | }
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97 | public IFixedValueParameter<IntValue> UpdateIntervalParameter {
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98 | get { return (IFixedValueParameter<IntValue>)Parameters[UpdateIntervalParameterName]; }
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99 | }
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100 | public IFixedValueParameter<BoolValue> CreateSolutionParameter {
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101 | get { return (IFixedValueParameter<BoolValue>)Parameters[CreateSolutionParameterName]; }
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102 | }
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103 | #endregion
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104 |
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105 | #region Properties
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106 | public int Iterations {
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107 | get { return IterationsParameter.Value.Value; }
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108 | set { IterationsParameter.Value.Value = value; }
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109 | }
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110 | public int Seed {
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111 | get { return SeedParameter.Value.Value; }
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112 | set { SeedParameter.Value.Value = value; }
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113 | }
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114 | public bool SetSeedRandomly {
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115 | get { return SetSeedRandomlyParameter.Value.Value; }
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116 | set { SetSeedRandomlyParameter.Value.Value = value; }
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117 | }
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118 | public int MaxVariableReferences {
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119 | get { return MaxVariableReferencesParameter.Value.Value; }
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120 | set { MaxVariableReferencesParameter.Value.Value = value; }
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121 | }
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122 | public IPolicy Policy {
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123 | get { return PolicyParameter.Value; }
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124 | set { PolicyParameter.Value = value; }
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125 | }
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126 | public double PunishmentFactor {
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127 | get { return PunishmentFactorParameter.Value.Value; }
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128 | set { PunishmentFactorParameter.Value.Value = value; }
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129 | }
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130 | public ICheckedItemList<StringValue> AllowedFactors {
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131 | get { return AllowedFactorsParameter.Value; }
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132 | }
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133 | public int ConstantOptimizationIterations {
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134 | get { return ConstantOptimizationIterationsParameter.Value.Value; }
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135 | set { ConstantOptimizationIterationsParameter.Value.Value = value; }
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136 | }
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137 | public bool ScaleVariables {
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138 | get { return ScaleVariablesParameter.Value.Value; }
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139 | set { ScaleVariablesParameter.Value.Value = value; }
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140 | }
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141 | public bool CreateSolution {
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142 | get { return CreateSolutionParameter.Value.Value; }
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143 | set { CreateSolutionParameter.Value.Value = value; }
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144 | }
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145 | #endregion
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146 |
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147 | [StorableConstructor]
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148 | protected MctsSymbolicRegressionAlgorithm(bool deserializing) : base(deserializing) { }
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149 |
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150 | protected MctsSymbolicRegressionAlgorithm(MctsSymbolicRegressionAlgorithm original, Cloner cloner)
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151 | : base(original, cloner) {
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152 | }
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153 |
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154 | public override IDeepCloneable Clone(Cloner cloner) {
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155 | return new MctsSymbolicRegressionAlgorithm(this, cloner);
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156 | }
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157 |
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158 | public MctsSymbolicRegressionAlgorithm() {
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159 | Problem = new RegressionProblem(); // default problem
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160 |
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161 | var defaultFactorsList = new CheckedItemList<StringValue>(
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162 | new string[] { VariableProductFactorName, ExpFactorName, LogFactorName, InvFactorName, FactorSumsName }
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163 | .Select(s => new StringValue(s).AsReadOnly())
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164 | ).AsReadOnly();
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165 | defaultFactorsList.SetItemCheckedState(defaultFactorsList.First(s => s.Value == FactorSumsName), false);
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166 |
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167 | Parameters.Add(new FixedValueParameter<IntValue>(IterationsParameterName,
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168 | "Number of iterations", new IntValue(100000)));
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169 | Parameters.Add(new FixedValueParameter<IntValue>(SeedParameterName,
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170 | "The random seed used to initialize the new pseudo random number generator.", new IntValue(0)));
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171 | Parameters.Add(new FixedValueParameter<BoolValue>(SetSeedRandomlyParameterName,
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172 | "True if the random seed should be set to a random value, otherwise false.", new BoolValue(true)));
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173 | Parameters.Add(new FixedValueParameter<IntValue>(MaxVariablesParameterName,
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174 | "Maximal number of variables references in the symbolic regression models (multiple usages of the same variable are counted)", new IntValue(5)));
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175 | // Parameters.Add(new FixedValueParameter<DoubleValue>(CParameterName,
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176 | // "Balancing parameter in UCT formula (0 < c < 1000). Small values: greedy search. Large values: enumeration. Default: 1.0", new DoubleValue(1.0)));
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177 | Parameters.Add(new ValueParameter<IPolicy>(PolicyParameterName,
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178 | "The policy to use for selecting nodes in MCTS (e.g. Ucb)", new Ucb()));
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179 | PolicyParameter.Hidden = true;
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180 | Parameters.Add(new ValueParameter<ICheckedItemList<StringValue>>(AllowedFactorsParameterName,
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181 | "Choose which expressions are allowed as factors in the model.", defaultFactorsList));
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182 |
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183 | Parameters.Add(new FixedValueParameter<IntValue>(ConstantOptimizationIterationsParameterName,
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184 | "Number of iterations for constant optimization. A small number of iterations should be sufficient for most models. " +
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185 | "Set to 0 to disable constants optimization.", new IntValue(10)));
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186 | Parameters.Add(new FixedValueParameter<BoolValue>(ScaleVariablesParameterName,
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187 | "Set to true to scale all input variables to the range [0..1]", new BoolValue(false)));
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188 | Parameters[ScaleVariablesParameterName].Hidden = true;
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189 | Parameters.Add(new FixedValueParameter<DoubleValue>(PunishmentFactorParameterName, "Estimations of models can be bounded. The estimation limits are calculated in the following way (lb = mean(y) - punishmentFactor*range(y), ub = mean(y) + punishmentFactor*range(y))", new DoubleValue(10)));
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190 | Parameters[PunishmentFactorParameterName].Hidden = true;
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191 | Parameters.Add(new FixedValueParameter<IntValue>(UpdateIntervalParameterName,
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192 | "Number of iterations until the results are updated", new IntValue(100)));
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193 | Parameters[UpdateIntervalParameterName].Hidden = true;
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194 | Parameters.Add(new FixedValueParameter<BoolValue>(CreateSolutionParameterName,
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195 | "Flag that indicates if a solution should be produced at the end of the run", new BoolValue(true)));
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196 | Parameters[CreateSolutionParameterName].Hidden = true;
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197 | }
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198 |
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199 | [StorableHook(HookType.AfterDeserialization)]
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200 | private void AfterDeserialization() {
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201 | }
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202 |
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203 | protected override void Run(CancellationToken cancellationToken) {
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204 | // Set up the algorithm
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205 | if (SetSeedRandomly) Seed = new System.Random().Next();
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206 |
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207 | // Set up the results display
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208 | var iterations = new IntValue(0);
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209 | Results.Add(new Result("Iterations", iterations));
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210 |
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211 | var bestSolutionIteration = new IntValue(0);
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212 | Results.Add(new Result("Best solution iteration", bestSolutionIteration));
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213 |
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214 | var table = new DataTable("Qualities");
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215 | table.Rows.Add(new DataRow("Best quality"));
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216 | table.Rows.Add(new DataRow("Current best quality"));
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217 | table.Rows.Add(new DataRow("Average quality"));
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218 | Results.Add(new Result("Qualities", table));
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219 |
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220 | var bestQuality = new DoubleValue();
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221 | Results.Add(new Result("Best quality", bestQuality));
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222 |
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223 | var curQuality = new DoubleValue();
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224 | Results.Add(new Result("Current best quality", curQuality));
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225 |
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226 | var avgQuality = new DoubleValue();
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227 | Results.Add(new Result("Average quality", avgQuality));
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228 |
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229 | var totalRollouts = new IntValue();
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230 | Results.Add(new Result("Total rollouts", totalRollouts));
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231 | var effRollouts = new IntValue();
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232 | Results.Add(new Result("Effective rollouts", effRollouts));
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233 | var funcEvals = new IntValue();
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234 | Results.Add(new Result("Function evaluations", funcEvals));
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235 | var gradEvals = new IntValue();
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236 | Results.Add(new Result("Gradient evaluations", gradEvals));
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237 |
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238 |
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239 | // same as in SymbolicRegressionSingleObjectiveProblem
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240 | var y = Problem.ProblemData.Dataset.GetDoubleValues(Problem.ProblemData.TargetVariable,
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241 | Problem.ProblemData.TrainingIndices);
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242 | var avgY = y.Average();
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243 | var minY = y.Min();
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244 | var maxY = y.Max();
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245 | var range = maxY - minY;
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246 | var lowerLimit = avgY - PunishmentFactor * range;
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247 | var upperLimit = avgY + PunishmentFactor * range;
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248 |
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249 | // init
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250 | var problemData = (IRegressionProblemData)Problem.ProblemData.Clone();
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251 | if (!AllowedFactors.CheckedItems.Any()) throw new ArgumentException("At least on type of factor must be allowed");
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252 | var state = MctsSymbolicRegressionStatic.CreateState(problemData, (uint)Seed, MaxVariableReferences, ScaleVariables, ConstantOptimizationIterations,
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253 | Policy,
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254 | lowerLimit, upperLimit,
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255 | allowProdOfVars: AllowedFactors.CheckedItems.Any(s => s.Value.Value == VariableProductFactorName),
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256 | allowExp: AllowedFactors.CheckedItems.Any(s => s.Value.Value == ExpFactorName),
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257 | allowLog: AllowedFactors.CheckedItems.Any(s => s.Value.Value == LogFactorName),
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258 | allowInv: AllowedFactors.CheckedItems.Any(s => s.Value.Value == InvFactorName),
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259 | allowMultipleTerms: AllowedFactors.CheckedItems.Any(s => s.Value.Value == FactorSumsName)
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260 | );
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261 |
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262 | var updateInterval = UpdateIntervalParameter.Value.Value;
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263 | double sumQ = 0.0;
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264 | double bestQ = 0.0;
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265 | double curBestQ = 0.0;
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266 | int n = 0;
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267 | // Loop until iteration limit reached or canceled.
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268 | for (int i = 0; i < Iterations && !state.Done; i++) {
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269 | cancellationToken.ThrowIfCancellationRequested();
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270 |
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271 | var q = MctsSymbolicRegressionStatic.MakeStep(state);
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272 | sumQ += q; // sum of qs in the last updateinterval iterations
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273 | curBestQ = Math.Max(q, curBestQ); // the best q in the last updateinterval iterations
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274 | bestQ = Math.Max(q, bestQ); // the best q overall
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275 | n++;
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276 | // iteration results
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277 | if (n == updateInterval) {
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278 | if (bestQ > bestQuality.Value) {
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279 | bestSolutionIteration.Value = i;
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280 | }
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281 | bestQuality.Value = bestQ;
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282 | curQuality.Value = curBestQ;
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283 | avgQuality.Value = sumQ / n;
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284 | sumQ = 0.0;
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285 | curBestQ = 0.0;
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286 |
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287 | funcEvals.Value = state.FuncEvaluations;
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288 | gradEvals.Value = state.GradEvaluations;
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289 | effRollouts.Value = state.EffectiveRollouts;
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290 | totalRollouts.Value = state.TotalRollouts;
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291 |
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292 | table.Rows["Best quality"].Values.Add(bestQuality.Value);
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293 | table.Rows["Current best quality"].Values.Add(curQuality.Value);
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294 | table.Rows["Average quality"].Values.Add(avgQuality.Value);
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295 | iterations.Value += n;
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296 | n = 0;
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297 | }
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298 | }
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299 |
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300 | // final results
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301 | if (n > 0) {
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302 | if (bestQ > bestQuality.Value) {
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303 | bestSolutionIteration.Value = iterations.Value + n;
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304 | }
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305 | bestQuality.Value = bestQ;
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306 | curQuality.Value = curBestQ;
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307 | avgQuality.Value = sumQ / n;
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308 |
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309 | funcEvals.Value = state.FuncEvaluations;
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310 | gradEvals.Value = state.GradEvaluations;
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311 | effRollouts.Value = state.EffectiveRollouts;
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312 | totalRollouts.Value = state.TotalRollouts;
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313 |
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314 | table.Rows["Best quality"].Values.Add(bestQuality.Value);
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315 | table.Rows["Current best quality"].Values.Add(curQuality.Value);
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316 | table.Rows["Average quality"].Values.Add(avgQuality.Value);
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317 | iterations.Value = iterations.Value + n;
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318 |
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319 | }
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320 |
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321 |
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322 | Results.Add(new Result("Best solution quality (train)", new DoubleValue(state.BestSolutionTrainingQuality)));
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323 | Results.Add(new Result("Best solution quality (test)", new DoubleValue(state.BestSolutionTestQuality)));
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324 |
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325 |
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326 | // produce solution
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327 | if (CreateSolution) {
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328 | var model = state.BestModel;
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329 |
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330 | // otherwise we produce a regression solution
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331 | Results.Add(new Result("Solution", model.CreateRegressionSolution(problemData)));
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332 | }
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333 | }
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334 | }
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335 | }
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