[13645] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[14185] | 3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[13645] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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| 23 | using System.Linq;
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| 24 | using System.Runtime.CompilerServices;
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| 25 | using System.Threading;
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[13658] | 26 | using HeuristicLab.Algorithms.DataAnalysis.MctsSymbolicRegression.Policies;
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[13645] | 27 | using HeuristicLab.Analysis;
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| 28 | using HeuristicLab.Common;
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| 29 | using HeuristicLab.Core;
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| 30 | using HeuristicLab.Data;
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| 31 | using HeuristicLab.Optimization;
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| 32 | using HeuristicLab.Parameters;
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| 33 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 34 | using HeuristicLab.Problems.DataAnalysis;
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| 35 |
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| 36 | namespace HeuristicLab.Algorithms.DataAnalysis.MctsSymbolicRegression {
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| 37 | [Item("MCTS Symbolic Regression", "Monte carlo tree search for symbolic regression. Useful mainly as a base learner in gradient boosting.")]
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| 38 | [StorableClass]
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| 39 | [Creatable(CreatableAttribute.Categories.DataAnalysisRegression, Priority = 250)]
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[14523] | 40 | public class MctsSymbolicRegressionAlgorithm : FixedDataAnalysisAlgorithm<IRegressionProblem> {
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[13645] | 41 |
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| 42 | #region ParameterNames
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| 43 | private const string IterationsParameterName = "Iterations";
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| 44 | private const string MaxVariablesParameterName = "Maximum variables";
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| 45 | private const string ScaleVariablesParameterName = "Scale variables";
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| 46 | private const string AllowedFactorsParameterName = "Allowed factors";
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| 47 | private const string ConstantOptimizationIterationsParameterName = "Iterations (constant optimization)";
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[13658] | 48 | private const string PolicyParameterName = "Policy";
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[13645] | 49 | private const string SeedParameterName = "Seed";
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| 50 | private const string SetSeedRandomlyParameterName = "SetSeedRandomly";
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| 51 | private const string UpdateIntervalParameterName = "UpdateInterval";
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| 52 | private const string CreateSolutionParameterName = "CreateSolution";
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| 53 | private const string PunishmentFactorParameterName = "PunishmentFactor";
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| 54 |
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| 55 | private const string VariableProductFactorName = "product(xi)";
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| 56 | private const string ExpFactorName = "exp(c * product(xi))";
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| 57 | private const string LogFactorName = "log(c + sum(c*product(xi))";
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| 58 | private const string InvFactorName = "1 / (1 + sum(c*product(xi))";
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| 59 | private const string FactorSumsName = "sum of multiple terms";
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| 60 | #endregion
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| 61 |
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| 62 | #region ParameterProperties
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| 63 | public IFixedValueParameter<IntValue> IterationsParameter {
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| 64 | get { return (IFixedValueParameter<IntValue>)Parameters[IterationsParameterName]; }
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| 65 | }
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[13652] | 66 | public IFixedValueParameter<IntValue> MaxVariableReferencesParameter {
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[13645] | 67 | get { return (IFixedValueParameter<IntValue>)Parameters[MaxVariablesParameterName]; }
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| 68 | }
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| 69 | public IFixedValueParameter<BoolValue> ScaleVariablesParameter {
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| 70 | get { return (IFixedValueParameter<BoolValue>)Parameters[ScaleVariablesParameterName]; }
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| 71 | }
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| 72 | public IFixedValueParameter<IntValue> ConstantOptimizationIterationsParameter {
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| 73 | get { return (IFixedValueParameter<IntValue>)Parameters[ConstantOptimizationIterationsParameterName]; }
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| 74 | }
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[13658] | 75 | public IValueParameter<IPolicy> PolicyParameter {
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| 76 | get { return (IValueParameter<IPolicy>)Parameters[PolicyParameterName]; }
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[13645] | 77 | }
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| 78 | public IFixedValueParameter<DoubleValue> PunishmentFactorParameter {
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| 79 | get { return (IFixedValueParameter<DoubleValue>)Parameters[PunishmentFactorParameterName]; }
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| 80 | }
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| 81 | public IValueParameter<ICheckedItemList<StringValue>> AllowedFactorsParameter {
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| 82 | get { return (IValueParameter<ICheckedItemList<StringValue>>)Parameters[AllowedFactorsParameterName]; }
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| 83 | }
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| 84 | public IFixedValueParameter<IntValue> SeedParameter {
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| 85 | get { return (IFixedValueParameter<IntValue>)Parameters[SeedParameterName]; }
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| 86 | }
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| 87 | public FixedValueParameter<BoolValue> SetSeedRandomlyParameter {
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| 88 | get { return (FixedValueParameter<BoolValue>)Parameters[SetSeedRandomlyParameterName]; }
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| 89 | }
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| 90 | public IFixedValueParameter<IntValue> UpdateIntervalParameter {
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| 91 | get { return (IFixedValueParameter<IntValue>)Parameters[UpdateIntervalParameterName]; }
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| 92 | }
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| 93 | public IFixedValueParameter<BoolValue> CreateSolutionParameter {
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| 94 | get { return (IFixedValueParameter<BoolValue>)Parameters[CreateSolutionParameterName]; }
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| 95 | }
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| 96 | #endregion
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| 97 |
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| 98 | #region Properties
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| 99 | public int Iterations {
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| 100 | get { return IterationsParameter.Value.Value; }
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| 101 | set { IterationsParameter.Value.Value = value; }
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| 102 | }
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| 103 | public int Seed {
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| 104 | get { return SeedParameter.Value.Value; }
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| 105 | set { SeedParameter.Value.Value = value; }
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| 106 | }
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| 107 | public bool SetSeedRandomly {
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| 108 | get { return SetSeedRandomlyParameter.Value.Value; }
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| 109 | set { SetSeedRandomlyParameter.Value.Value = value; }
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| 110 | }
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[13652] | 111 | public int MaxVariableReferences {
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| 112 | get { return MaxVariableReferencesParameter.Value.Value; }
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| 113 | set { MaxVariableReferencesParameter.Value.Value = value; }
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[13645] | 114 | }
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[13658] | 115 | public IPolicy Policy {
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| 116 | get { return PolicyParameter.Value; }
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| 117 | set { PolicyParameter.Value = value; }
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[13645] | 118 | }
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| 119 | public double PunishmentFactor {
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| 120 | get { return PunishmentFactorParameter.Value.Value; }
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| 121 | set { PunishmentFactorParameter.Value.Value = value; }
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| 122 | }
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| 123 | public ICheckedItemList<StringValue> AllowedFactors {
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| 124 | get { return AllowedFactorsParameter.Value; }
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| 125 | }
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| 126 | public int ConstantOptimizationIterations {
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| 127 | get { return ConstantOptimizationIterationsParameter.Value.Value; }
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| 128 | set { ConstantOptimizationIterationsParameter.Value.Value = value; }
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| 129 | }
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| 130 | public bool ScaleVariables {
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| 131 | get { return ScaleVariablesParameter.Value.Value; }
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| 132 | set { ScaleVariablesParameter.Value.Value = value; }
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| 133 | }
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| 134 | public bool CreateSolution {
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| 135 | get { return CreateSolutionParameter.Value.Value; }
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| 136 | set { CreateSolutionParameter.Value.Value = value; }
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| 137 | }
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| 138 | #endregion
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| 139 |
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| 140 | [StorableConstructor]
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| 141 | protected MctsSymbolicRegressionAlgorithm(bool deserializing) : base(deserializing) { }
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| 142 |
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| 143 | protected MctsSymbolicRegressionAlgorithm(MctsSymbolicRegressionAlgorithm original, Cloner cloner)
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| 144 | : base(original, cloner) {
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| 145 | }
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| 146 |
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| 147 | public override IDeepCloneable Clone(Cloner cloner) {
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| 148 | return new MctsSymbolicRegressionAlgorithm(this, cloner);
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| 149 | }
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| 150 |
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| 151 | public MctsSymbolicRegressionAlgorithm() {
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| 152 | Problem = new RegressionProblem(); // default problem
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| 153 |
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| 154 | var defaultFactorsList = new CheckedItemList<StringValue>(
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| 155 | new string[] { VariableProductFactorName, ExpFactorName, LogFactorName, InvFactorName, FactorSumsName }
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| 156 | .Select(s => new StringValue(s).AsReadOnly())
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| 157 | ).AsReadOnly();
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| 158 | defaultFactorsList.SetItemCheckedState(defaultFactorsList.First(s => s.Value == FactorSumsName), false);
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| 159 |
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| 160 | Parameters.Add(new FixedValueParameter<IntValue>(IterationsParameterName,
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| 161 | "Number of iterations", new IntValue(100000)));
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| 162 | Parameters.Add(new FixedValueParameter<IntValue>(SeedParameterName,
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| 163 | "The random seed used to initialize the new pseudo random number generator.", new IntValue(0)));
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| 164 | Parameters.Add(new FixedValueParameter<BoolValue>(SetSeedRandomlyParameterName,
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| 165 | "True if the random seed should be set to a random value, otherwise false.", new BoolValue(true)));
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| 166 | Parameters.Add(new FixedValueParameter<IntValue>(MaxVariablesParameterName,
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| 167 | "Maximal number of variables references in the symbolic regression models (multiple usages of the same variable are counted)", new IntValue(5)));
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[13658] | 168 | // Parameters.Add(new FixedValueParameter<DoubleValue>(CParameterName,
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| 169 | // "Balancing parameter in UCT formula (0 < c < 1000). Small values: greedy search. Large values: enumeration. Default: 1.0", new DoubleValue(1.0)));
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| 170 | Parameters.Add(new ValueParameter<IPolicy>(PolicyParameterName,
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| 171 | "The policy to use for selecting nodes in MCTS (e.g. Ucb)", new Ucb()));
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| 172 | PolicyParameter.Hidden = true;
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[13645] | 173 | Parameters.Add(new ValueParameter<ICheckedItemList<StringValue>>(AllowedFactorsParameterName,
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| 174 | "Choose which expressions are allowed as factors in the model.", defaultFactorsList));
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| 175 |
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| 176 | Parameters.Add(new FixedValueParameter<IntValue>(ConstantOptimizationIterationsParameterName,
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| 177 | "Number of iterations for constant optimization. A small number of iterations should be sufficient for most models. " +
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| 178 | "Set to 0 to disable constants optimization.", new IntValue(10)));
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| 179 | Parameters.Add(new FixedValueParameter<BoolValue>(ScaleVariablesParameterName,
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| 180 | "Set to true to scale all input variables to the range [0..1]", new BoolValue(false)));
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| 181 | Parameters[ScaleVariablesParameterName].Hidden = true;
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| 182 | Parameters.Add(new FixedValueParameter<DoubleValue>(PunishmentFactorParameterName, "Estimations of models can be bounded. The estimation limits are calculated in the following way (lb = mean(y) - punishmentFactor*range(y), ub = mean(y) + punishmentFactor*range(y))", new DoubleValue(10)));
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| 183 | Parameters[PunishmentFactorParameterName].Hidden = true;
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| 184 | Parameters.Add(new FixedValueParameter<IntValue>(UpdateIntervalParameterName,
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| 185 | "Number of iterations until the results are updated", new IntValue(100)));
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| 186 | Parameters[UpdateIntervalParameterName].Hidden = true;
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| 187 | Parameters.Add(new FixedValueParameter<BoolValue>(CreateSolutionParameterName,
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| 188 | "Flag that indicates if a solution should be produced at the end of the run", new BoolValue(true)));
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| 189 | Parameters[CreateSolutionParameterName].Hidden = true;
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| 190 | }
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| 191 |
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| 192 | [StorableHook(HookType.AfterDeserialization)]
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| 193 | private void AfterDeserialization() {
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| 194 | }
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| 195 |
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| 196 | protected override void Run(CancellationToken cancellationToken) {
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| 197 | // Set up the algorithm
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| 198 | if (SetSeedRandomly) Seed = new System.Random().Next();
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| 199 |
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| 200 | // Set up the results display
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| 201 | var iterations = new IntValue(0);
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| 202 | Results.Add(new Result("Iterations", iterations));
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| 203 |
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[13669] | 204 | var bestSolutionIteration = new IntValue(0);
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| 205 | Results.Add(new Result("Best solution iteration", bestSolutionIteration));
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| 206 |
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[13645] | 207 | var table = new DataTable("Qualities");
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| 208 | table.Rows.Add(new DataRow("Best quality"));
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| 209 | table.Rows.Add(new DataRow("Current best quality"));
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| 210 | table.Rows.Add(new DataRow("Average quality"));
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| 211 | Results.Add(new Result("Qualities", table));
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| 212 |
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| 213 | var bestQuality = new DoubleValue();
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| 214 | Results.Add(new Result("Best quality", bestQuality));
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| 215 |
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| 216 | var curQuality = new DoubleValue();
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| 217 | Results.Add(new Result("Current best quality", curQuality));
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| 218 |
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| 219 | var avgQuality = new DoubleValue();
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| 220 | Results.Add(new Result("Average quality", avgQuality));
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| 221 |
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[13651] | 222 | var totalRollouts = new IntValue();
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| 223 | Results.Add(new Result("Total rollouts", totalRollouts));
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| 224 | var effRollouts = new IntValue();
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| 225 | Results.Add(new Result("Effective rollouts", effRollouts));
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| 226 | var funcEvals = new IntValue();
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| 227 | Results.Add(new Result("Function evaluations", funcEvals));
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| 228 | var gradEvals = new IntValue();
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| 229 | Results.Add(new Result("Gradient evaluations", gradEvals));
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| 230 |
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| 231 |
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[13645] | 232 | // same as in SymbolicRegressionSingleObjectiveProblem
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| 233 | var y = Problem.ProblemData.Dataset.GetDoubleValues(Problem.ProblemData.TargetVariable,
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| 234 | Problem.ProblemData.TrainingIndices);
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| 235 | var avgY = y.Average();
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| 236 | var minY = y.Min();
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| 237 | var maxY = y.Max();
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| 238 | var range = maxY - minY;
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| 239 | var lowerLimit = avgY - PunishmentFactor * range;
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| 240 | var upperLimit = avgY + PunishmentFactor * range;
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| 241 |
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| 242 | // init
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| 243 | var problemData = (IRegressionProblemData)Problem.ProblemData.Clone();
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| 244 | if (!AllowedFactors.CheckedItems.Any()) throw new ArgumentException("At least on type of factor must be allowed");
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[13658] | 245 | var state = MctsSymbolicRegressionStatic.CreateState(problemData, (uint)Seed, MaxVariableReferences, ScaleVariables, ConstantOptimizationIterations,
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| 246 | Policy,
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[13645] | 247 | lowerLimit, upperLimit,
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| 248 | allowProdOfVars: AllowedFactors.CheckedItems.Any(s => s.Value.Value == VariableProductFactorName),
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| 249 | allowExp: AllowedFactors.CheckedItems.Any(s => s.Value.Value == ExpFactorName),
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| 250 | allowLog: AllowedFactors.CheckedItems.Any(s => s.Value.Value == LogFactorName),
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| 251 | allowInv: AllowedFactors.CheckedItems.Any(s => s.Value.Value == InvFactorName),
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| 252 | allowMultipleTerms: AllowedFactors.CheckedItems.Any(s => s.Value.Value == FactorSumsName)
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| 253 | );
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| 254 |
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| 255 | var updateInterval = UpdateIntervalParameter.Value.Value;
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| 256 | double sumQ = 0.0;
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| 257 | double bestQ = 0.0;
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| 258 | double curBestQ = 0.0;
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| 259 | int n = 0;
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| 260 | // Loop until iteration limit reached or canceled.
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| 261 | for (int i = 0; i < Iterations && !state.Done; i++) {
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| 262 | cancellationToken.ThrowIfCancellationRequested();
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| 263 |
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[13669] | 264 | var q = MctsSymbolicRegressionStatic.MakeStep(state);
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[13645] | 265 | sumQ += q; // sum of qs in the last updateinterval iterations
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| 266 | curBestQ = Math.Max(q, curBestQ); // the best q in the last updateinterval iterations
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| 267 | bestQ = Math.Max(q, bestQ); // the best q overall
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| 268 | n++;
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| 269 | // iteration results
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| 270 | if (n == updateInterval) {
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[13669] | 271 | if (bestQ > bestQuality.Value) {
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| 272 | bestSolutionIteration.Value = i;
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| 273 | }
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[13645] | 274 | bestQuality.Value = bestQ;
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| 275 | curQuality.Value = curBestQ;
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| 276 | avgQuality.Value = sumQ / n;
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| 277 | sumQ = 0.0;
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| 278 | curBestQ = 0.0;
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| 279 |
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[13651] | 280 | funcEvals.Value = state.FuncEvaluations;
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| 281 | gradEvals.Value = state.GradEvaluations;
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| 282 | effRollouts.Value = state.EffectiveRollouts;
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| 283 | totalRollouts.Value = state.TotalRollouts;
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| 284 |
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[13645] | 285 | table.Rows["Best quality"].Values.Add(bestQuality.Value);
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| 286 | table.Rows["Current best quality"].Values.Add(curQuality.Value);
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| 287 | table.Rows["Average quality"].Values.Add(avgQuality.Value);
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| 288 | iterations.Value += n;
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| 289 | n = 0;
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| 290 | }
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| 291 | }
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| 292 |
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| 293 | // final results
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| 294 | if (n > 0) {
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[13669] | 295 | if (bestQ > bestQuality.Value) {
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| 296 | bestSolutionIteration.Value = iterations.Value + n;
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| 297 | }
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[13645] | 298 | bestQuality.Value = bestQ;
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| 299 | curQuality.Value = curBestQ;
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| 300 | avgQuality.Value = sumQ / n;
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| 301 |
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[13651] | 302 | funcEvals.Value = state.FuncEvaluations;
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| 303 | gradEvals.Value = state.GradEvaluations;
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| 304 | effRollouts.Value = state.EffectiveRollouts;
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| 305 | totalRollouts.Value = state.TotalRollouts;
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| 306 |
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[13645] | 307 | table.Rows["Best quality"].Values.Add(bestQuality.Value);
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| 308 | table.Rows["Current best quality"].Values.Add(curQuality.Value);
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| 309 | table.Rows["Average quality"].Values.Add(avgQuality.Value);
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| 310 | iterations.Value = iterations.Value + n;
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[13651] | 311 |
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[13645] | 312 | }
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| 313 |
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| 314 |
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| 315 | Results.Add(new Result("Best solution quality (train)", new DoubleValue(state.BestSolutionTrainingQuality)));
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| 316 | Results.Add(new Result("Best solution quality (test)", new DoubleValue(state.BestSolutionTestQuality)));
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| 317 |
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[13651] | 318 |
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[13645] | 319 | // produce solution
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| 320 | if (CreateSolution) {
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| 321 | var model = state.BestModel;
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| 322 |
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| 323 | // otherwise we produce a regression solution
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| 324 | Results.Add(new Result("Solution", model.CreateRegressionSolution(problemData)));
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| 325 | }
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| 326 | }
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| 327 | }
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| 328 | }
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