[12590] | 1 | #region License Information
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| 2 | /* HeuristicLab
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| 3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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| 4 | * and the BEACON Center for the Study of Evolution in Action.
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| 5 | *
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| 6 | * This file is part of HeuristicLab.
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| 7 | *
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| 8 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 9 | * it under the terms of the GNU General Public License as published by
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| 10 | * the Free Software Foundation, either version 3 of the License, or
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| 11 | * (at your option) any later version.
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| 12 | *
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| 13 | * HeuristicLab is distributed in the hope that it will be useful,
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| 14 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 15 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 16 | * GNU General Public License for more details.
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| 17 | *
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| 18 | * You should have received a copy of the GNU General Public License
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| 19 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 20 | */
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| 21 | #endregion
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| 22 |
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[12658] | 23 | using System;
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[12372] | 24 | using System.Collections.Generic;
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[13030] | 25 | using System.Collections.ObjectModel;
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[12658] | 26 | using System.Globalization;
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[12332] | 27 | using System.Linq;
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| 28 | using HeuristicLab.Common;
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| 29 | using HeuristicLab.Core;
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| 30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 31 | using HeuristicLab.Problems.DataAnalysis;
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| 32 |
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[12590] | 33 | namespace HeuristicLab.Algorithms.DataAnalysis {
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[12332] | 34 | [StorableClass]
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| 35 | [Item("RegressionTreeModel", "Represents a decision tree for regression.")]
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[12658] | 36 | public sealed class RegressionTreeModel : NamedItem, IRegressionModel {
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[12332] | 37 |
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[12699] | 38 | // trees are represented as a flat array
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[12658] | 39 | internal struct TreeNode {
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[12699] | 40 | public readonly static string NO_VARIABLE = null;
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[12332] | 41 |
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[12658] | 42 | public TreeNode(string varName, double val, int leftIdx = -1, int rightIdx = -1)
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| 43 | : this() {
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| 44 | VarName = varName;
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| 45 | Val = val;
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| 46 | LeftIdx = leftIdx;
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| 47 | RightIdx = rightIdx;
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| 48 | }
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| 49 |
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| 50 | public string VarName { get; private set; } // name of the variable for splitting or NO_VARIABLE if terminal node
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| 51 | public double Val { get; private set; } // threshold
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| 52 | public int LeftIdx { get; private set; }
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| 53 | public int RightIdx { get; private set; }
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| 54 |
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| 55 | // necessary because the default implementation of GetHashCode for structs in .NET would only return the hashcode of val here
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[12590] | 56 | public override int GetHashCode() {
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[12632] | 57 | return LeftIdx ^ RightIdx ^ Val.GetHashCode();
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[12372] | 58 | }
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[12658] | 59 | // necessary because of GetHashCode override
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| 60 | public override bool Equals(object obj) {
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| 61 | if (obj is TreeNode) {
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| 62 | var other = (TreeNode)obj;
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| 63 | return Val.Equals(other.Val) &&
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| 64 | LeftIdx.Equals(other.LeftIdx) &&
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[12663] | 65 | RightIdx.Equals(other.RightIdx) &&
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| 66 | EqualStrings(VarName, other.VarName);
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[12658] | 67 | } else {
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| 68 | return false;
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| 69 | }
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| 70 | }
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[12663] | 71 |
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| 72 | private bool EqualStrings(string a, string b) {
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| 73 | return (a == null && b == null) ||
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| 74 | (a != null && b != null && a.Equals(b));
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| 75 | }
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[12332] | 76 | }
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| 77 |
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[12699] | 78 | // not storable!
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| 79 | private TreeNode[] tree;
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| 80 |
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[12332] | 81 | [Storable]
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[12699] | 82 | // to prevent storing the references to data caches in nodes
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[13030] | 83 | // TODO seemingly it is bad (performance-wise) to persist tuples (tuples are used as keys in a dictionary)
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[12699] | 84 | private Tuple<string, double, int, int>[] SerializedTree {
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| 85 | get { return tree.Select(t => Tuple.Create(t.VarName, t.Val, t.LeftIdx, t.RightIdx)).ToArray(); }
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| 86 | set { this.tree = value.Select(t => new TreeNode(t.Item1, t.Item2, t.Item3, t.Item4)).ToArray(); }
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| 87 | }
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[12332] | 88 |
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| 89 | [StorableConstructor]
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| 90 | private RegressionTreeModel(bool serializing) : base(serializing) { }
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| 91 | // cloning ctor
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[12658] | 92 | private RegressionTreeModel(RegressionTreeModel original, Cloner cloner)
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[12332] | 93 | : base(original, cloner) {
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[12699] | 94 | if (original.tree != null) {
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| 95 | this.tree = new TreeNode[original.tree.Length];
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| 96 | Array.Copy(original.tree, this.tree, this.tree.Length);
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| 97 | }
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[12332] | 98 | }
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| 99 |
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[12658] | 100 | internal RegressionTreeModel(TreeNode[] tree)
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[12372] | 101 | : base("RegressionTreeModel", "Represents a decision tree for regression.") {
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[12332] | 102 | this.tree = tree;
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| 103 | }
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| 104 |
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[13030] | 105 | private static double GetPredictionForRow(TreeNode[] t, ReadOnlyCollection<double>[] columnCache, int nodeIdx, int row) {
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[12699] | 106 | while (nodeIdx != -1) {
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| 107 | var node = t[nodeIdx];
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| 108 | if (node.VarName == TreeNode.NO_VARIABLE)
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| 109 | return node.Val;
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| 110 |
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[13030] | 111 | if (columnCache[nodeIdx][row] <= node.Val)
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[12699] | 112 | nodeIdx = node.LeftIdx;
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| 113 | else
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| 114 | nodeIdx = node.RightIdx;
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| 115 | }
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| 116 | throw new InvalidOperationException("Invalid tree in RegressionTreeModel");
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[12332] | 117 | }
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| 118 |
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| 119 | public override IDeepCloneable Clone(Cloner cloner) {
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| 120 | return new RegressionTreeModel(this, cloner);
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| 121 | }
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| 122 |
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[12589] | 123 | public IEnumerable<double> GetEstimatedValues(IDataset ds, IEnumerable<int> rows) {
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[12699] | 124 | // lookup columns for variableNames in one pass over the tree to speed up evaluation later on
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[13030] | 125 | ReadOnlyCollection<double>[] columnCache = new ReadOnlyCollection<double>[tree.Length];
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| 126 |
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[12699] | 127 | for (int i = 0; i < tree.Length; i++) {
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| 128 | if (tree[i].VarName != TreeNode.NO_VARIABLE) {
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[13030] | 129 | columnCache[i] = ds.GetReadOnlyDoubleValues(tree[i].VarName);
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[12699] | 130 | }
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| 131 | }
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[13030] | 132 | return rows.Select(r => GetPredictionForRow(tree, columnCache, 0, r));
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[12332] | 133 | }
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| 134 |
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| 135 | public IRegressionSolution CreateRegressionSolution(IRegressionProblemData problemData) {
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| 136 | return new RegressionSolution(this, new RegressionProblemData(problemData));
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| 137 | }
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[12658] | 138 |
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| 139 | // mainly for debugging
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| 140 | public override string ToString() {
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| 141 | return TreeToString(0, "");
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| 142 | }
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| 143 |
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| 144 | private string TreeToString(int idx, string part) {
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| 145 | var n = tree[idx];
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| 146 | if (n.VarName == TreeNode.NO_VARIABLE) {
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| 147 | return string.Format(CultureInfo.InvariantCulture, "{0} -> {1:F}{2}", part, n.Val, Environment.NewLine);
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| 148 | } else {
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| 149 | return
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| 150 | TreeToString(n.LeftIdx, string.Format(CultureInfo.InvariantCulture, "{0}{1}{2} <= {3:F}", part, string.IsNullOrEmpty(part) ? "" : " and ", n.VarName, n.Val))
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| 151 | + TreeToString(n.RightIdx, string.Format(CultureInfo.InvariantCulture, "{0}{1}{2} > {3:F}", part, string.IsNullOrEmpty(part) ? "" : " and ", n.VarName, n.Val));
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| 152 | }
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| 153 | }
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[12332] | 154 | }
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| 155 | }
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