[8464] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[12012] | 3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[8464] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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[8484] | 23 | using System.Collections.Generic;
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[10489] | 24 | using System.Linq;
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[8464] | 25 | using HeuristicLab.Common;
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| 26 | using HeuristicLab.Core;
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[8582] | 27 | using HeuristicLab.Data;
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[8982] | 28 | using HeuristicLab.Parameters;
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[8464] | 29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 30 |
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| 31 | namespace HeuristicLab.Algorithms.DataAnalysis {
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| 32 | [StorableClass]
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| 33 | [Item(Name = "CovarianceConst",
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| 34 | Description = "Constant covariance function for Gaussian processes.")]
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[8612] | 35 | public sealed class CovarianceConst : ParameterizedNamedItem, ICovarianceFunction {
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[8582] | 36 | public IValueParameter<DoubleValue> ScaleParameter {
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[8982] | 37 | get { return (IValueParameter<DoubleValue>)Parameters["Scale"]; }
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[8582] | 38 | }
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[10489] | 39 | private bool HasFixedScaleParameter {
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| 40 | get { return ScaleParameter.Value != null; }
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| 41 | }
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[8464] | 42 | [StorableConstructor]
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[8612] | 43 | private CovarianceConst(bool deserializing)
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[8464] | 44 | : base(deserializing) {
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| 45 | }
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| 46 |
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[8612] | 47 | private CovarianceConst(CovarianceConst original, Cloner cloner)
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[8464] | 48 | : base(original, cloner) {
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| 49 | }
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| 50 |
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| 51 | public CovarianceConst()
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| 52 | : base() {
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[8612] | 53 | Name = ItemName;
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| 54 | Description = ItemDescription;
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| 55 |
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[8982] | 56 | Parameters.Add(new OptionalValueParameter<DoubleValue>("Scale", "The scale of the constant covariance function."));
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[8464] | 57 | }
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| 58 |
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| 59 | public override IDeepCloneable Clone(Cloner cloner) {
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| 60 | return new CovarianceConst(this, cloner);
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| 61 | }
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| 62 |
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[8612] | 63 | public int GetNumberOfParameters(int numberOfVariables) {
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[10489] | 64 | return HasFixedScaleParameter ? 0 : 1;
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[8464] | 65 | }
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| 66 |
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[8982] | 67 | public void SetParameter(double[] p) {
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| 68 | double scale;
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| 69 | GetParameterValues(p, out scale);
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| 70 | ScaleParameter.Value = new DoubleValue(scale);
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| 71 | }
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| 72 |
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| 73 | private void GetParameterValues(double[] p, out double scale) {
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| 74 | int c = 0;
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| 75 | // gather parameter values
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[10489] | 76 | if (HasFixedScaleParameter) {
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[8982] | 77 | scale = ScaleParameter.Value.Value;
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[8582] | 78 | } else {
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[8982] | 79 | scale = Math.Exp(2 * p[c]);
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| 80 | c++;
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[8582] | 81 | }
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[8982] | 82 | if (p.Length != c) throw new ArgumentException("The length of the parameter vector does not match the number of free parameters for CovarianceConst", "p");
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[8464] | 83 | }
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| 84 |
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[8982] | 85 | public ParameterizedCovarianceFunction GetParameterizedCovarianceFunction(double[] p, IEnumerable<int> columnIndices) {
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| 86 | double scale;
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| 87 | GetParameterValues(p, out scale);
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| 88 | // create functions
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| 89 | var cov = new ParameterizedCovarianceFunction();
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| 90 | cov.Covariance = (x, i, j) => scale;
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| 91 | cov.CrossCovariance = (x, xt, i, j) => scale;
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[10489] | 92 | if (HasFixedScaleParameter) {
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| 93 | cov.CovarianceGradient = (x, i, j) => Enumerable.Empty<double>();
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| 94 | } else {
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| 95 | cov.CovarianceGradient = (x, i, j) => GetGradient(x, i, j, scale, columnIndices);
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| 96 | }
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[8982] | 97 | return cov;
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[8464] | 98 | }
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| 99 |
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[8982] | 100 | private static IEnumerable<double> GetGradient(double[,] x, int i, int j, double scale, IEnumerable<int> columnIndices) {
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[8582] | 101 | yield return 2.0 * scale;
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[8464] | 102 | }
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| 103 | }
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| 104 | }
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