1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2012 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using HeuristicLab.Common;
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25 | using HeuristicLab.Core;
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26 | using HeuristicLab.Data;
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27 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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28 |
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29 | namespace HeuristicLab.Algorithms.DataAnalysis {
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30 | [StorableClass]
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31 | [Item(Name = "CovarianceConst",
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32 | Description = "Constant covariance function for Gaussian processes.")]
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33 | public sealed class CovarianceConst : ParameterizedNamedItem, ICovarianceFunction {
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34 |
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35 | [Storable]
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36 | private double scale;
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37 | [Storable]
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38 | private readonly HyperParameter<DoubleValue> scaleParameter;
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39 | public IValueParameter<DoubleValue> ScaleParameter {
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40 | get { return scaleParameter; }
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41 | }
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42 |
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43 | [StorableConstructor]
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44 | private CovarianceConst(bool deserializing)
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45 | : base(deserializing) {
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46 | }
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47 |
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48 | private CovarianceConst(CovarianceConst original, Cloner cloner)
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49 | : base(original, cloner) {
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50 | this.scaleParameter = cloner.Clone(original.scaleParameter);
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51 | this.scale = original.scale;
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52 |
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53 | RegisterEvents();
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54 | }
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55 |
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56 | public CovarianceConst()
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57 | : base() {
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58 | Name = ItemName;
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59 | Description = ItemDescription;
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60 |
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61 | scaleParameter = new HyperParameter<DoubleValue>("Scale", "The scale of the constant covariance function.");
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62 | Parameters.Add(scaleParameter);
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63 | RegisterEvents();
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64 | }
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65 |
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66 | [StorableHook(HookType.AfterDeserialization)]
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67 | private void AfterDeserialization() {
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68 | RegisterEvents();
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69 | }
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70 |
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71 | // caching
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72 | private void RegisterEvents() {
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73 | Util.AttachValueChangeHandler<DoubleValue, double>(scaleParameter, () => { scale = scaleParameter.Value.Value; });
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74 | }
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75 |
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76 |
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77 | public override IDeepCloneable Clone(Cloner cloner) {
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78 | return new CovarianceConst(this, cloner);
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79 | }
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80 |
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81 | public int GetNumberOfParameters(int numberOfVariables) {
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82 | return scaleParameter.Fixed ? 0 : 1;
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83 | }
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84 |
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85 | public void SetParameter(double[] hyp) {
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86 | if (!scaleParameter.Fixed && hyp.Length == 1) {
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87 | scaleParameter.SetValue(new DoubleValue(Math.Exp(2 * hyp[0])));
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88 | } else {
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89 | throw new ArgumentException("The length of the parameter vector does not match the number of free parameters for CovarianceConst", "hyp");
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90 | }
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91 | }
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92 |
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93 | public double GetCovariance(double[,] x, int i, int j, IEnumerable<int> columnIndices) {
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94 | return scale;
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95 | }
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96 |
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97 | public IEnumerable<double> GetGradient(double[,] x, int i, int j, IEnumerable<int> columnIndices) {
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98 | yield return 2.0 * scale;
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99 | }
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100 |
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101 | public double GetCrossCovariance(double[,] x, double[,] xt, int i, int j, IEnumerable<int> columnIndices) {
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102 | return scale;
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103 | }
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104 | }
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105 | }
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