1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2018 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using HeuristicLab.Collections;
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26 | using HeuristicLab.Common;
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27 | using HeuristicLab.Core;
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28 | using HeuristicLab.Data;
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29 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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30 |
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31 | namespace HeuristicLab.Problems.DataAnalysis {
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32 | /// <summary>
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33 | /// Represents regression solutions that contain an ensemble of multiple regression models
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34 | /// </summary>
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35 | [StorableClass]
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36 | [Item("Regression Ensemble Solution", "A regression solution that contains an ensemble of multiple regression models")]
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37 | [Creatable(CreatableAttribute.Categories.DataAnalysisEnsembles, Priority = 100)]
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38 | public sealed class RegressionEnsembleSolution : RegressionSolutionBase, IRegressionEnsembleSolution {
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39 | private readonly Dictionary<int, double> trainingEvaluationCache = new Dictionary<int, double>();
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40 | private readonly Dictionary<int, double> testEvaluationCache = new Dictionary<int, double>();
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41 | private readonly Dictionary<int, double> evaluationCache = new Dictionary<int, double>();
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42 |
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43 | public new IRegressionEnsembleModel Model {
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44 | get { return (IRegressionEnsembleModel)base.Model; }
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45 | }
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46 |
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47 | public new RegressionEnsembleProblemData ProblemData {
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48 | get { return (RegressionEnsembleProblemData)base.ProblemData; }
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49 | set { base.ProblemData = value; }
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50 | }
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51 |
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52 | [Storable]
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53 | private readonly ItemCollection<IRegressionSolution> regressionSolutions;
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54 | public IItemCollection<IRegressionSolution> RegressionSolutions {
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55 | get { return regressionSolutions; }
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56 | }
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57 |
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58 | [Storable]
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59 | private readonly Dictionary<IRegressionModel, IntRange> trainingPartitions;
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60 | [Storable]
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61 | private readonly Dictionary<IRegressionModel, IntRange> testPartitions;
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62 |
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63 | [StorableConstructor]
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64 | private RegressionEnsembleSolution(bool deserializing)
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65 | : base(deserializing) {
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66 | regressionSolutions = new ItemCollection<IRegressionSolution>();
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67 | }
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68 | [StorableHook(HookType.AfterDeserialization)]
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69 | private void AfterDeserialization() {
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70 | if (!regressionSolutions.Any()) {
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71 | foreach (var model in Model.Models) {
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72 | IRegressionProblemData problemData = (IRegressionProblemData)ProblemData.Clone();
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73 | problemData.TrainingPartition.Start = trainingPartitions[model].Start;
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74 | problemData.TrainingPartition.End = trainingPartitions[model].End;
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75 | problemData.TestPartition.Start = testPartitions[model].Start;
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76 | problemData.TestPartition.End = testPartitions[model].End;
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77 |
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78 | regressionSolutions.Add(model.CreateRegressionSolution(problemData));
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79 | }
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80 | }
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81 |
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82 | RegisterModelEvents();
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83 | RegisterRegressionSolutionsEventHandler();
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84 | }
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85 |
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86 | private RegressionEnsembleSolution(RegressionEnsembleSolution original, Cloner cloner)
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87 | : base(original, cloner) {
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88 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
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89 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
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90 | foreach (var pair in original.trainingPartitions) {
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91 | trainingPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
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92 | }
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93 | foreach (var pair in original.testPartitions) {
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94 | testPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
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95 | }
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96 |
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97 | evaluationCache = new Dictionary<int, double>(original.ProblemData.Dataset.Rows);
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98 | trainingEvaluationCache = new Dictionary<int, double>(original.ProblemData.TrainingIndices.Count());
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99 | testEvaluationCache = new Dictionary<int, double>(original.ProblemData.TestIndices.Count());
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100 |
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101 | regressionSolutions = cloner.Clone(original.regressionSolutions);
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102 | RegisterModelEvents();
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103 | RegisterRegressionSolutionsEventHandler();
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104 | }
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105 |
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106 | public RegressionEnsembleSolution()
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107 | : base(new RegressionEnsembleModel(), RegressionEnsembleProblemData.EmptyProblemData) {
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108 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
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109 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
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110 | regressionSolutions = new ItemCollection<IRegressionSolution>();
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111 |
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112 | RegisterModelEvents();
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113 | RegisterRegressionSolutionsEventHandler();
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114 | }
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115 |
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116 | public RegressionEnsembleSolution(IRegressionProblemData problemData)
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117 | : this(new RegressionEnsembleModel(), problemData) {
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118 | }
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119 |
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120 | public RegressionEnsembleSolution(IRegressionEnsembleModel model, IRegressionProblemData problemData)
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121 | : base(model, new RegressionEnsembleProblemData(problemData)) {
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122 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
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123 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
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124 | regressionSolutions = new ItemCollection<IRegressionSolution>();
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125 |
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126 | evaluationCache = new Dictionary<int, double>(problemData.Dataset.Rows);
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127 | trainingEvaluationCache = new Dictionary<int, double>(problemData.TrainingIndices.Count());
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128 | testEvaluationCache = new Dictionary<int, double>(problemData.TestIndices.Count());
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129 |
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130 |
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131 | var solutions = model.Models.Select(m => m.CreateRegressionSolution((IRegressionProblemData)problemData.Clone()));
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132 | foreach (var solution in solutions) {
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133 | regressionSolutions.Add(solution);
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134 | trainingPartitions.Add(solution.Model, solution.ProblemData.TrainingPartition);
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135 | testPartitions.Add(solution.Model, solution.ProblemData.TestPartition);
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136 | }
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137 |
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138 | RecalculateResults();
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139 | RegisterModelEvents();
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140 | RegisterRegressionSolutionsEventHandler();
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141 | }
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142 |
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143 |
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144 | public override IDeepCloneable Clone(Cloner cloner) {
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145 | return new RegressionEnsembleSolution(this, cloner);
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146 | }
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147 |
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148 | private void RegisterModelEvents() {
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149 | Model.Changed += Model_Changed;
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150 | }
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151 | private void RegisterRegressionSolutionsEventHandler() {
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152 | regressionSolutions.ItemsAdded += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_ItemsAdded);
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153 | regressionSolutions.ItemsRemoved += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_ItemsRemoved);
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154 | regressionSolutions.CollectionReset += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_CollectionReset);
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155 | }
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156 |
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157 | #region Evaluation
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158 | public override IEnumerable<double> EstimatedValues {
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159 | get { return GetEstimatedValues(Enumerable.Range(0, ProblemData.Dataset.Rows)); }
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160 | }
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161 |
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162 | public override IEnumerable<double> EstimatedTrainingValues {
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163 | get {
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164 | var rows = ProblemData.TrainingIndices;
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165 | var rowsToEvaluate = rows.Except(trainingEvaluationCache.Keys);
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166 |
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167 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
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168 | var valuesEnumerator = Model.GetEstimatedValues(ProblemData.Dataset, rowsToEvaluate, (r, m) => RowIsTrainingForModel(r, m) && !RowIsTestForModel(r, m)).GetEnumerator();
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169 |
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170 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
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171 | trainingEvaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
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172 | }
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173 |
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174 | return rows.Select(row => trainingEvaluationCache[row]);
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175 | }
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176 | }
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177 |
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178 | public override IEnumerable<double> EstimatedTestValues {
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179 | get {
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180 | var rows = ProblemData.TestIndices;
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181 | var rowsToEvaluate = rows.Except(testEvaluationCache.Keys);
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182 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
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183 | var valuesEnumerator = Model.GetEstimatedValues(ProblemData.Dataset, rowsToEvaluate, RowIsTestForModel).GetEnumerator();
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184 |
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185 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
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186 | testEvaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
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187 | }
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188 |
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189 | return rows.Select(row => testEvaluationCache[row]);
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190 | }
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191 | }
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192 | private bool RowIsTrainingForModel(int currentRow, IRegressionModel model) {
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193 | return trainingPartitions == null || !trainingPartitions.ContainsKey(model) ||
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194 | (trainingPartitions[model].Start <= currentRow && currentRow < trainingPartitions[model].End);
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195 | }
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196 | private bool RowIsTestForModel(int currentRow, IRegressionModel model) {
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197 | return testPartitions == null || !testPartitions.ContainsKey(model) ||
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198 | (testPartitions[model].Start <= currentRow && currentRow < testPartitions[model].End);
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199 | }
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200 |
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201 | public override IEnumerable<double> GetEstimatedValues(IEnumerable<int> rows) {
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202 | var rowsToEvaluate = rows.Except(evaluationCache.Keys);
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203 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
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204 | var valuesEnumerator = Model.GetEstimatedValues(ProblemData.Dataset, rowsToEvaluate).GetEnumerator();
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205 |
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206 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
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207 | evaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
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208 | }
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209 |
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210 | return rows.Select(row => evaluationCache[row]);
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211 | }
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212 |
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213 | public IEnumerable<IEnumerable<double>> GetEstimatedValueVectors(IEnumerable<int> rows) {
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214 | return Model.GetEstimatedValueVectors(ProblemData.Dataset, rows);
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215 | }
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216 | #endregion
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217 |
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218 | protected override void OnProblemDataChanged() {
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219 | trainingEvaluationCache.Clear();
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220 | testEvaluationCache.Clear();
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221 | evaluationCache.Clear();
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222 | IRegressionProblemData problemData = new RegressionProblemData(ProblemData.Dataset,
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223 | ProblemData.AllowedInputVariables,
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224 | ProblemData.TargetVariable);
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225 | problemData.TrainingPartition.Start = ProblemData.TrainingPartition.Start;
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226 | problemData.TrainingPartition.End = ProblemData.TrainingPartition.End;
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227 | problemData.TestPartition.Start = ProblemData.TestPartition.Start;
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228 | problemData.TestPartition.End = ProblemData.TestPartition.End;
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229 |
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230 | foreach (var solution in RegressionSolutions) {
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231 | if (solution is RegressionEnsembleSolution)
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232 | solution.ProblemData = ProblemData;
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233 | else
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234 | solution.ProblemData = problemData;
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235 | }
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236 | foreach (var trainingPartition in trainingPartitions.Values) {
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237 | trainingPartition.Start = ProblemData.TrainingPartition.Start;
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238 | trainingPartition.End = ProblemData.TrainingPartition.End;
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239 | }
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240 | foreach (var testPartition in testPartitions.Values) {
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241 | testPartition.Start = ProblemData.TestPartition.Start;
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242 | testPartition.End = ProblemData.TestPartition.End;
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243 | }
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244 |
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245 | base.OnProblemDataChanged();
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246 | }
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247 |
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248 | private void Model_Changed(object sender, EventArgs e) {
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249 | var modelSet = new HashSet<IRegressionModel>(Model.Models);
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250 | foreach (var model in Model.Models) {
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251 | if (!trainingPartitions.ContainsKey(model)) trainingPartitions.Add(model, ProblemData.TrainingPartition);
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252 | if (!testPartitions.ContainsKey(model)) testPartitions.Add(model, ProblemData.TrainingPartition);
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253 | }
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254 | foreach (var model in trainingPartitions.Keys) {
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255 | if (modelSet.Contains(model)) continue;
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256 | trainingPartitions.Remove(model);
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257 | testPartitions.Remove(model);
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258 | }
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259 |
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260 | trainingEvaluationCache.Clear();
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261 | testEvaluationCache.Clear();
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262 | evaluationCache.Clear();
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263 |
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264 | OnModelChanged();
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265 | }
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266 |
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267 | public void AddRegressionSolutions(IEnumerable<IRegressionSolution> solutions) {
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268 | regressionSolutions.AddRange(solutions);
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269 | }
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270 | public void RemoveRegressionSolutions(IEnumerable<IRegressionSolution> solutions) {
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271 | regressionSolutions.RemoveRange(solutions);
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272 | }
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273 |
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274 | private void regressionSolutions_ItemsAdded(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
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275 | foreach (var solution in e.Items) {
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276 | trainingPartitions.Add(solution.Model, solution.ProblemData.TrainingPartition);
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277 | testPartitions.Add(solution.Model, solution.ProblemData.TestPartition);
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278 | }
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279 | Model.AddRange(e.Items.Select(s => s.Model));
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280 | }
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281 | private void regressionSolutions_ItemsRemoved(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
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282 | foreach (var solution in e.Items) {
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283 | trainingPartitions.Remove(solution.Model);
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284 | testPartitions.Remove(solution.Model);
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285 | }
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286 | Model.RemoveRange(e.Items.Select(s => s.Model));
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287 | }
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288 | private void regressionSolutions_CollectionReset(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
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289 | foreach (var solution in e.OldItems) {
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290 | trainingPartitions.Remove(solution.Model);
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291 | testPartitions.Remove(solution.Model);
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292 | }
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293 | Model.RemoveRange(e.OldItems.Select(s => s.Model));
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294 |
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295 | foreach (var solution in e.Items) {
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296 | trainingPartitions.Add(solution.Model, solution.ProblemData.TrainingPartition);
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297 | testPartitions.Add(solution.Model, solution.ProblemData.TestPartition);
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298 | }
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299 | Model.AddRange(e.Items.Select(s => s.Model));
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300 | }
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301 | }
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302 | }
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