1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2019 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using HEAL.Attic;
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26 | using HeuristicLab.Common;
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27 | using HeuristicLab.Core;
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28 | using HeuristicLab.Data;
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29 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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30 | using HeuristicLab.Parameters;
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31 | using HeuristicLab.Random;
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32 | using static HeuristicLab.Problems.DataAnalysis.Symbolic.SymbolicExpressionHashExtensions;
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33 |
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34 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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35 | [Item("DiversityCrossover", "Simple crossover operator preventing swap between subtrees with the same hash value.")]
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36 | [StorableType("ED35B0D9-9704-4D32-B10B-8F9870E76781")]
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37 | public sealed class SymbolicDataAnalysisExpressionDiversityPreservingCrossover<T> : SymbolicDataAnalysisExpressionCrossover<T> where T : class, IDataAnalysisProblemData {
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38 |
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39 | private const string InternalCrossoverPointProbabilityParameterName = "InternalCrossoverPointProbability";
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40 | private const string WindowingParameterName = "Windowing";
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41 | private const string ProportionalSamplingParameterName = "ProportionalSampling";
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42 | private const string StrictHashingParameterName = "StrictHashing";
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43 |
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44 | private static readonly Func<byte[], ulong> hashFunction = HashUtil.JSHash;
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45 |
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46 | #region Parameter Properties
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47 | public IValueLookupParameter<PercentValue> InternalCrossoverPointProbabilityParameter {
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48 | get { return (IValueLookupParameter<PercentValue>)Parameters[InternalCrossoverPointProbabilityParameterName]; }
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49 | }
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50 |
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51 | public IValueLookupParameter<BoolValue> WindowingParameter {
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52 | get { return (IValueLookupParameter<BoolValue>)Parameters[WindowingParameterName]; }
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53 | }
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54 |
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55 | public IValueLookupParameter<BoolValue> ProportionalSamplingParameter {
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56 | get { return (IValueLookupParameter<BoolValue>)Parameters[ProportionalSamplingParameterName]; }
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57 | }
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58 |
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59 | public IFixedValueParameter<BoolValue> StrictHashingParameter {
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60 | get { return (IFixedValueParameter<BoolValue>)Parameters[StrictHashingParameterName]; }
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61 | }
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62 | #endregion
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63 |
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64 | #region Properties
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65 | public PercentValue InternalCrossoverPointProbability {
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66 | get { return InternalCrossoverPointProbabilityParameter.ActualValue; }
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67 | }
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68 |
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69 | public BoolValue Windowing {
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70 | get { return WindowingParameter.ActualValue; }
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71 | }
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72 |
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73 | public BoolValue ProportionalSampling {
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74 | get { return ProportionalSamplingParameter.ActualValue; }
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75 | }
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76 |
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77 | bool StrictHashing {
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78 | get { return StrictHashingParameter.Value.Value; }
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79 | }
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80 | #endregion
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81 |
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82 |
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83 | [StorableHook(HookType.AfterDeserialization)]
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84 | private void AfterDeserialization() {
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85 | if (!Parameters.ContainsKey(StrictHashingParameterName)) {
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86 | Parameters.Add(new FixedValueParameter<BoolValue>(StrictHashingParameterName, "Use strict hashing when calculating subtree hash values."));
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87 | }
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88 | }
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89 |
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90 | public SymbolicDataAnalysisExpressionDiversityPreservingCrossover() {
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91 | name = "DiversityCrossover";
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92 | Parameters.Add(new ValueLookupParameter<PercentValue>(InternalCrossoverPointProbabilityParameterName, "The probability to select an internal crossover point (instead of a leaf node).", new PercentValue(0.9)));
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93 | Parameters.Add(new ValueLookupParameter<BoolValue>(WindowingParameterName, "Use proportional sampling with windowing for cutpoint selection.", new BoolValue(false)));
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94 | Parameters.Add(new ValueLookupParameter<BoolValue>(ProportionalSamplingParameterName, "Select cutpoints proportionally using probabilities as weights instead of randomly.", new BoolValue(true)));
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95 | Parameters.Add(new FixedValueParameter<BoolValue>(StrictHashingParameterName, "Use strict hashing when calculating subtree hash values."));
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96 | }
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97 |
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98 | private SymbolicDataAnalysisExpressionDiversityPreservingCrossover(SymbolicDataAnalysisExpressionDiversityPreservingCrossover<T> original, Cloner cloner) : base(original, cloner) {
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99 | }
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100 |
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101 | public override IDeepCloneable Clone(Cloner cloner) {
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102 | return new SymbolicDataAnalysisExpressionDiversityPreservingCrossover<T>(this, cloner);
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103 | }
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104 |
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105 | [StorableConstructor]
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106 | private SymbolicDataAnalysisExpressionDiversityPreservingCrossover(StorableConstructorFlag _) : base(_) { }
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107 |
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108 | private static ISymbolicExpressionTreeNode ActualRoot(ISymbolicExpressionTree tree) {
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109 | return tree.Root.GetSubtree(0).GetSubtree(0);
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110 | }
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111 |
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112 | public static ISymbolicExpressionTree Cross(IRandom random, ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1, double internalCrossoverPointProbability, int maxLength, int maxDepth, bool windowing, bool proportionalSampling = false, bool strictHashing = false) {
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113 | var nodes0 = ActualRoot(parent0).MakeNodes(strictHashing).Sort(hashFunction);
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114 | var nodes1 = ActualRoot(parent1).MakeNodes(strictHashing).Sort(hashFunction);
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115 |
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116 | IList<HashNode<ISymbolicExpressionTreeNode>> sampled0;
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117 | IList<HashNode<ISymbolicExpressionTreeNode>> sampled1;
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118 |
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119 | if (proportionalSampling) {
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120 | var p = internalCrossoverPointProbability;
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121 | var weights0 = nodes0.Select(x => x.IsLeaf ? 1 - p : p);
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122 | sampled0 = nodes0.SampleProportionalWithoutRepetition(random, nodes0.Length, weights0, windowing: windowing).ToArray();
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123 |
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124 | var weights1 = nodes1.Select(x => x.IsLeaf ? 1 - p : p);
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125 | sampled1 = nodes1.SampleProportionalWithoutRepetition(random, nodes1.Length, weights1, windowing: windowing).ToArray();
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126 | } else {
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127 | sampled0 = ChooseNodes(random, nodes0, internalCrossoverPointProbability).ShuffleInPlace(random);
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128 | sampled1 = ChooseNodes(random, nodes1, internalCrossoverPointProbability).ShuffleInPlace(random);
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129 | }
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130 |
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131 | foreach (var selected in sampled0) {
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132 | var cutpoint = new CutPoint(selected.Data.Parent, selected.Data);
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133 |
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134 | var maxAllowedDepth = maxDepth - parent0.Root.GetBranchLevel(selected.Data);
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135 | var maxAllowedLength = maxLength - (parent0.Length - selected.Data.GetLength());
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136 |
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137 | foreach (var candidate in sampled1) {
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138 | if (candidate.CalculatedHashValue == selected.CalculatedHashValue
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139 | || candidate.Data.GetDepth() > maxAllowedDepth
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140 | || candidate.Data.GetLength() > maxAllowedLength
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141 | || !cutpoint.IsMatchingPointType(candidate.Data)) {
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142 | continue;
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143 | }
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144 |
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145 | Swap(cutpoint, candidate.Data);
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146 | return parent0;
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147 | }
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148 | }
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149 | return parent0;
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150 | }
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151 |
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152 | public override ISymbolicExpressionTree Crossover(IRandom random, ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1) {
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153 | if (this.ExecutionContext == null) {
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154 | throw new InvalidOperationException("ExecutionContext not set.");
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155 | }
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156 |
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157 | var maxDepth = MaximumSymbolicExpressionTreeDepth.Value;
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158 | var maxLength = MaximumSymbolicExpressionTreeLength.Value;
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159 |
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160 | var internalCrossoverPointProbability = InternalCrossoverPointProbability.Value;
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161 | var windowing = Windowing.Value;
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162 | var proportionalSampling = ProportionalSampling.Value;
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163 |
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164 | return Cross(random, parent0, parent1, internalCrossoverPointProbability, maxLength, maxDepth, windowing, proportionalSampling, StrictHashing);
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165 | }
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166 |
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167 | private static List<HashNode<ISymbolicExpressionTreeNode>> ChooseNodes(IRandom random, IEnumerable<HashNode<ISymbolicExpressionTreeNode>> nodes, double internalCrossoverPointProbability) {
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168 | var list = new List<HashNode<ISymbolicExpressionTreeNode>>();
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169 |
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170 | var chooseInternal = random.NextDouble() < internalCrossoverPointProbability;
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171 |
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172 | if (chooseInternal) {
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173 | list.AddRange(nodes.Where(x => !x.IsLeaf && x.Data.Parent != null));
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174 | }
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175 | if (!chooseInternal || list.Count == 0) {
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176 | list.AddRange(nodes.Where(x => x.IsLeaf && x.Data.Parent != null));
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177 | }
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178 |
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179 | return list;
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180 | }
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181 | }
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182 | }
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