[13120] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[17180] | 3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[13120] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 | using System;
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| 22 | using System.Collections.Generic;
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| 23 | using System.Linq;
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| 24 | using HeuristicLab.Common;
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| 25 | using HeuristicLab.Core;
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| 26 | using HeuristicLab.Parameters;
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[16565] | 27 | using HEAL.Attic;
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[13120] | 28 | using HeuristicLab.Problems.DataAnalysis;
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| 29 |
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| 30 | namespace HeuristicLab.Algorithms.DataAnalysis {
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[16565] | 31 | [StorableType("4A05BC94-CC08-45E0-989A-516B1C1CC956")]
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[13120] | 32 | [Item(Name = "MeanModel", Description = "A mean function for Gaussian processes that uses a regression solution created with a different algorithm to calculate the mean.")]
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[13136] | 33 | // essentially an adaptor which maps from IMeanFunction to IRegressionSolution
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[13120] | 34 | public sealed class MeanModel : ParameterizedNamedItem, IMeanFunction {
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| 35 | public IValueParameter<IRegressionSolution> RegressionSolutionParameter {
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| 36 | get { return (IValueParameter<IRegressionSolution>)Parameters["RegressionSolution"]; }
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| 37 | }
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| 38 | public IRegressionSolution RegressionSolution {
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| 39 | get { return RegressionSolutionParameter.Value; }
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| 40 | set { RegressionSolutionParameter.Value = value; }
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| 41 | }
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| 42 |
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| 43 | [StorableConstructor]
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[16565] | 44 | private MeanModel(StorableConstructorFlag _) : base(_) { }
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[13120] | 45 | private MeanModel(MeanModel original, Cloner cloner)
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| 46 | : base(original, cloner) {
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| 47 | }
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| 48 |
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| 49 | public MeanModel()
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| 50 | : base("MeanModel", "A mean function for Gaussian processes that uses a regression solution created with a different algorithm to calculate the mean.") {
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| 51 | Parameters.Add(new ValueParameter<IRegressionSolution>("RegressionSolution", "The solution containing the model that should be used for the mean prediction."));
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| 52 | }
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| 53 |
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| 54 | public MeanModel(IRegressionSolution solution)
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| 55 | : this() {
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| 56 | // here we cannot check if the model is actually compatible (uses only input variables that are available)
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| 57 | // we only assume that the list of allowed inputs in the regression solution is the same as the list of allowed
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| 58 | // inputs in the Gaussian process.
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| 59 | // later we might get an error or bad behaviour when the mean function is evaluated
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| 60 | RegressionSolution = solution;
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| 61 | }
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| 62 |
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| 63 | public override IDeepCloneable Clone(Cloner cloner) {
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| 64 | return new MeanModel(this, cloner);
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| 65 | }
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| 66 |
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| 67 | public int GetNumberOfParameters(int numberOfVariables) {
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| 68 | return 0; // no support for hyperparameters for regression models yet
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| 69 | }
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| 70 |
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| 71 | public void SetParameter(double[] p) {
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| 72 | if (p.Length > 0) throw new ArgumentException("No parameters allowed for model-based mean function.", "p");
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| 73 | }
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| 74 |
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[13721] | 75 | public ParameterizedMeanFunction GetParameterizedMeanFunction(double[] p, int[] columnIndices) {
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[13120] | 76 | if (p.Length > 0) throw new ArgumentException("No parameters allowed for model-based mean function.", "p");
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| 77 | var solution = RegressionSolution;
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| 78 | var variableNames = solution.ProblemData.AllowedInputVariables.ToArray();
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[13721] | 79 | if (variableNames.Length != columnIndices.Length)
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[13120] | 80 | throw new ArgumentException("The number of input variables does not match in MeanModel");
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| 81 | var variableValues = variableNames.Select(_ => new List<double>() { 0.0 }).ToArray(); // or of zeros
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| 82 | // uses modifyable dataset to pass values to the model
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| 83 | var ds = new ModifiableDataset(variableNames, variableValues);
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| 84 | var mf = new ParameterizedMeanFunction();
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| 85 | var model = solution.Model; // effort for parameter access only once
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| 86 | mf.Mean = (x, i) => {
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| 87 | ds.ReplaceRow(0, Util.GetRow(x, i, columnIndices).OfType<object>());
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| 88 | return model.GetEstimatedValues(ds, 0.ToEnumerable()).Single(); // evaluate the model on the specified row only
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| 89 | };
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| 90 | mf.Gradient = (x, i, k) => {
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| 91 | if (k > 0)
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| 92 | throw new ArgumentException();
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| 93 | return 0.0;
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| 94 | };
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| 95 | return mf;
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| 96 | }
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| 97 | }
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| 98 | }
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