[5816] | 1 | #region License Information
|
---|
| 2 | /* HeuristicLab
|
---|
[17181] | 3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
[5816] | 4 | *
|
---|
| 5 | * This file is part of HeuristicLab.
|
---|
| 6 | *
|
---|
| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
| 8 | * it under the terms of the GNU General Public License as published by
|
---|
| 9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
| 10 | * (at your option) any later version.
|
---|
| 11 | *
|
---|
| 12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
| 15 | * GNU General Public License for more details.
|
---|
| 16 | *
|
---|
| 17 | * You should have received a copy of the GNU General Public License
|
---|
| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
| 19 | */
|
---|
| 20 | #endregion
|
---|
| 21 |
|
---|
[6588] | 22 | using System;
|
---|
[5816] | 23 | using System.Collections.Generic;
|
---|
| 24 | using System.Linq;
|
---|
[6612] | 25 | using HeuristicLab.Collections;
|
---|
[5816] | 26 | using HeuristicLab.Common;
|
---|
| 27 | using HeuristicLab.Core;
|
---|
[6588] | 28 | using HeuristicLab.Data;
|
---|
[17097] | 29 | using HEAL.Attic;
|
---|
[5816] | 30 |
|
---|
| 31 | namespace HeuristicLab.Problems.DataAnalysis {
|
---|
| 32 | /// <summary>
|
---|
| 33 | /// Represents regression solutions that contain an ensemble of multiple regression models
|
---|
| 34 | /// </summary>
|
---|
[17097] | 35 | [StorableType("C5B38C31-4307-48E4-9BCD-6797C329E018")]
|
---|
[5816] | 36 | [Item("Regression Ensemble Solution", "A regression solution that contains an ensemble of multiple regression models")]
|
---|
[12708] | 37 | [Creatable(CreatableAttribute.Categories.DataAnalysisEnsembles, Priority = 100)]
|
---|
[8724] | 38 | public sealed class RegressionEnsembleSolution : RegressionSolutionBase, IRegressionEnsembleSolution {
|
---|
[8167] | 39 | private readonly Dictionary<int, double> trainingEvaluationCache = new Dictionary<int, double>();
|
---|
| 40 | private readonly Dictionary<int, double> testEvaluationCache = new Dictionary<int, double>();
|
---|
[8724] | 41 | private readonly Dictionary<int, double> evaluationCache = new Dictionary<int, double>();
|
---|
[8151] | 42 |
|
---|
[5816] | 43 | public new IRegressionEnsembleModel Model {
|
---|
| 44 | get { return (IRegressionEnsembleModel)base.Model; }
|
---|
| 45 | }
|
---|
| 46 |
|
---|
[6666] | 47 | public new RegressionEnsembleProblemData ProblemData {
|
---|
| 48 | get { return (RegressionEnsembleProblemData)base.ProblemData; }
|
---|
| 49 | set { base.ProblemData = value; }
|
---|
| 50 | }
|
---|
| 51 |
|
---|
[13049] | 52 | [Storable]
|
---|
[6612] | 53 | private readonly ItemCollection<IRegressionSolution> regressionSolutions;
|
---|
| 54 | public IItemCollection<IRegressionSolution> RegressionSolutions {
|
---|
| 55 | get { return regressionSolutions; }
|
---|
| 56 | }
|
---|
| 57 |
|
---|
[5816] | 58 | [Storable]
|
---|
[8152] | 59 | private readonly Dictionary<IRegressionModel, IntRange> trainingPartitions;
|
---|
[5816] | 60 | [Storable]
|
---|
[8152] | 61 | private readonly Dictionary<IRegressionModel, IntRange> testPartitions;
|
---|
[5816] | 62 |
|
---|
| 63 | [StorableConstructor]
|
---|
[17097] | 64 | private RegressionEnsembleSolution(StorableConstructorFlag _) : base(_) {
|
---|
[6612] | 65 | regressionSolutions = new ItemCollection<IRegressionSolution>();
|
---|
| 66 | }
|
---|
| 67 | [StorableHook(HookType.AfterDeserialization)]
|
---|
| 68 | private void AfterDeserialization() {
|
---|
[13049] | 69 | if (!regressionSolutions.Any()) {
|
---|
| 70 | foreach (var model in Model.Models) {
|
---|
| 71 | IRegressionProblemData problemData = (IRegressionProblemData)ProblemData.Clone();
|
---|
| 72 | problemData.TrainingPartition.Start = trainingPartitions[model].Start;
|
---|
| 73 | problemData.TrainingPartition.End = trainingPartitions[model].End;
|
---|
| 74 | problemData.TestPartition.Start = testPartitions[model].Start;
|
---|
| 75 | problemData.TestPartition.End = testPartitions[model].End;
|
---|
[6612] | 76 |
|
---|
[13049] | 77 | regressionSolutions.Add(model.CreateRegressionSolution(problemData));
|
---|
| 78 | }
|
---|
[6612] | 79 | }
|
---|
[13976] | 80 |
|
---|
| 81 | RegisterModelEvents();
|
---|
[6612] | 82 | RegisterRegressionSolutionsEventHandler();
|
---|
| 83 | }
|
---|
| 84 |
|
---|
[6592] | 85 | private RegressionEnsembleSolution(RegressionEnsembleSolution original, Cloner cloner)
|
---|
[5816] | 86 | : base(original, cloner) {
|
---|
[6239] | 87 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
|
---|
| 88 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
|
---|
[6302] | 89 | foreach (var pair in original.trainingPartitions) {
|
---|
| 90 | trainingPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
|
---|
[6239] | 91 | }
|
---|
[6302] | 92 | foreach (var pair in original.testPartitions) {
|
---|
| 93 | testPartitions[cloner.Clone(pair.Key)] = cloner.Clone(pair.Value);
|
---|
| 94 | }
|
---|
[6612] | 95 |
|
---|
[13976] | 96 | evaluationCache = new Dictionary<int, double>(original.ProblemData.Dataset.Rows);
|
---|
[8174] | 97 | trainingEvaluationCache = new Dictionary<int, double>(original.ProblemData.TrainingIndices.Count());
|
---|
| 98 | testEvaluationCache = new Dictionary<int, double>(original.ProblemData.TestIndices.Count());
|
---|
| 99 |
|
---|
[6612] | 100 | regressionSolutions = cloner.Clone(original.regressionSolutions);
|
---|
[13976] | 101 | RegisterModelEvents();
|
---|
[6612] | 102 | RegisterRegressionSolutionsEventHandler();
|
---|
[5816] | 103 | }
|
---|
[6239] | 104 |
|
---|
[6666] | 105 | public RegressionEnsembleSolution()
|
---|
| 106 | : base(new RegressionEnsembleModel(), RegressionEnsembleProblemData.EmptyProblemData) {
|
---|
| 107 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
|
---|
| 108 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
|
---|
| 109 | regressionSolutions = new ItemCollection<IRegressionSolution>();
|
---|
| 110 |
|
---|
[13976] | 111 | RegisterModelEvents();
|
---|
[6666] | 112 | RegisterRegressionSolutionsEventHandler();
|
---|
| 113 | }
|
---|
| 114 |
|
---|
[7738] | 115 | public RegressionEnsembleSolution(IRegressionProblemData problemData)
|
---|
[13976] | 116 | : this(new RegressionEnsembleModel(), problemData) {
|
---|
[7738] | 117 | }
|
---|
| 118 |
|
---|
[13976] | 119 | public RegressionEnsembleSolution(IRegressionEnsembleModel model, IRegressionProblemData problemData)
|
---|
| 120 | : base(model, new RegressionEnsembleProblemData(problemData)) {
|
---|
| 121 | trainingPartitions = new Dictionary<IRegressionModel, IntRange>();
|
---|
| 122 | testPartitions = new Dictionary<IRegressionModel, IntRange>();
|
---|
| 123 | regressionSolutions = new ItemCollection<IRegressionSolution>();
|
---|
[5816] | 124 |
|
---|
[13976] | 125 | evaluationCache = new Dictionary<int, double>(problemData.Dataset.Rows);
|
---|
| 126 | trainingEvaluationCache = new Dictionary<int, double>(problemData.TrainingIndices.Count());
|
---|
| 127 | testEvaluationCache = new Dictionary<int, double>(problemData.TestIndices.Count());
|
---|
[6612] | 128 |
|
---|
| 129 |
|
---|
[13976] | 130 | var solutions = model.Models.Select(m => m.CreateRegressionSolution((IRegressionProblemData)problemData.Clone()));
|
---|
| 131 | foreach (var solution in solutions) {
|
---|
| 132 | regressionSolutions.Add(solution);
|
---|
| 133 | trainingPartitions.Add(solution.Model, solution.ProblemData.TrainingPartition);
|
---|
| 134 | testPartitions.Add(solution.Model, solution.ProblemData.TestPartition);
|
---|
[6612] | 135 | }
|
---|
| 136 |
|
---|
[13976] | 137 | RecalculateResults();
|
---|
| 138 | RegisterModelEvents();
|
---|
[6612] | 139 | RegisterRegressionSolutionsEventHandler();
|
---|
[5816] | 140 | }
|
---|
| 141 |
|
---|
[13976] | 142 |
|
---|
[5816] | 143 | public override IDeepCloneable Clone(Cloner cloner) {
|
---|
| 144 | return new RegressionEnsembleSolution(this, cloner);
|
---|
| 145 | }
|
---|
[13976] | 146 |
|
---|
| 147 | private void RegisterModelEvents() {
|
---|
| 148 | Model.Changed += Model_Changed;
|
---|
| 149 | }
|
---|
[6612] | 150 | private void RegisterRegressionSolutionsEventHandler() {
|
---|
| 151 | regressionSolutions.ItemsAdded += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_ItemsAdded);
|
---|
| 152 | regressionSolutions.ItemsRemoved += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_ItemsRemoved);
|
---|
| 153 | regressionSolutions.CollectionReset += new CollectionItemsChangedEventHandler<IRegressionSolution>(regressionSolutions_CollectionReset);
|
---|
| 154 | }
|
---|
[5816] | 155 |
|
---|
[6612] | 156 | #region Evaluation
|
---|
[8724] | 157 | public override IEnumerable<double> EstimatedValues {
|
---|
| 158 | get { return GetEstimatedValues(Enumerable.Range(0, ProblemData.Dataset.Rows)); }
|
---|
| 159 | }
|
---|
| 160 |
|
---|
[5816] | 161 | public override IEnumerable<double> EstimatedTrainingValues {
|
---|
[8152] | 162 | get {
|
---|
| 163 | var rows = ProblemData.TrainingIndices;
|
---|
[8167] | 164 | var rowsToEvaluate = rows.Except(trainingEvaluationCache.Keys);
|
---|
[13976] | 165 |
|
---|
[8152] | 166 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
|
---|
[13976] | 167 | var valuesEnumerator = Model.GetEstimatedValues(ProblemData.Dataset, rowsToEvaluate, (r, m) => RowIsTrainingForModel(r, m) && !RowIsTestForModel(r, m)).GetEnumerator();
|
---|
[8152] | 168 |
|
---|
| 169 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
|
---|
[8167] | 170 | trainingEvaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
|
---|
[8152] | 171 | }
|
---|
| 172 |
|
---|
[8167] | 173 | return rows.Select(row => trainingEvaluationCache[row]);
|
---|
[8152] | 174 | }
|
---|
[5816] | 175 | }
|
---|
| 176 |
|
---|
| 177 | public override IEnumerable<double> EstimatedTestValues {
|
---|
[8152] | 178 | get {
|
---|
| 179 | var rows = ProblemData.TestIndices;
|
---|
[8167] | 180 | var rowsToEvaluate = rows.Except(testEvaluationCache.Keys);
|
---|
[8152] | 181 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
|
---|
[13976] | 182 | var valuesEnumerator = Model.GetEstimatedValues(ProblemData.Dataset, rowsToEvaluate, RowIsTestForModel).GetEnumerator();
|
---|
[8152] | 183 |
|
---|
| 184 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
|
---|
[8167] | 185 | testEvaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
|
---|
[8152] | 186 | }
|
---|
| 187 |
|
---|
[8167] | 188 | return rows.Select(row => testEvaluationCache[row]);
|
---|
[8152] | 189 | }
|
---|
[8151] | 190 | }
|
---|
[6254] | 191 | private bool RowIsTrainingForModel(int currentRow, IRegressionModel model) {
|
---|
| 192 | return trainingPartitions == null || !trainingPartitions.ContainsKey(model) ||
|
---|
| 193 | (trainingPartitions[model].Start <= currentRow && currentRow < trainingPartitions[model].End);
|
---|
| 194 | }
|
---|
| 195 | private bool RowIsTestForModel(int currentRow, IRegressionModel model) {
|
---|
| 196 | return testPartitions == null || !testPartitions.ContainsKey(model) ||
|
---|
| 197 | (testPartitions[model].Start <= currentRow && currentRow < testPartitions[model].End);
|
---|
| 198 | }
|
---|
| 199 |
|
---|
[5816] | 200 | public override IEnumerable<double> GetEstimatedValues(IEnumerable<int> rows) {
|
---|
[8167] | 201 | var rowsToEvaluate = rows.Except(evaluationCache.Keys);
|
---|
[8152] | 202 | var rowsEnumerator = rowsToEvaluate.GetEnumerator();
|
---|
[13976] | 203 | var valuesEnumerator = Model.GetEstimatedValues(ProblemData.Dataset, rowsToEvaluate).GetEnumerator();
|
---|
[8152] | 204 |
|
---|
| 205 | while (rowsEnumerator.MoveNext() & valuesEnumerator.MoveNext()) {
|
---|
[8167] | 206 | evaluationCache.Add(rowsEnumerator.Current, valuesEnumerator.Current);
|
---|
[8152] | 207 | }
|
---|
| 208 |
|
---|
[8167] | 209 | return rows.Select(row => evaluationCache[row]);
|
---|
[5816] | 210 | }
|
---|
| 211 |
|
---|
[13976] | 212 | public IEnumerable<IEnumerable<double>> GetEstimatedValueVectors(IEnumerable<int> rows) {
|
---|
| 213 | return Model.GetEstimatedValueVectors(ProblemData.Dataset, rows);
|
---|
[5816] | 214 | }
|
---|
[6612] | 215 | #endregion
|
---|
[6520] | 216 |
|
---|
[6666] | 217 | protected override void OnProblemDataChanged() {
|
---|
[8167] | 218 | trainingEvaluationCache.Clear();
|
---|
| 219 | testEvaluationCache.Clear();
|
---|
| 220 | evaluationCache.Clear();
|
---|
[6666] | 221 | IRegressionProblemData problemData = new RegressionProblemData(ProblemData.Dataset,
|
---|
| 222 | ProblemData.AllowedInputVariables,
|
---|
| 223 | ProblemData.TargetVariable);
|
---|
| 224 | problemData.TrainingPartition.Start = ProblemData.TrainingPartition.Start;
|
---|
| 225 | problemData.TrainingPartition.End = ProblemData.TrainingPartition.End;
|
---|
| 226 | problemData.TestPartition.Start = ProblemData.TestPartition.Start;
|
---|
| 227 | problemData.TestPartition.End = ProblemData.TestPartition.End;
|
---|
| 228 |
|
---|
| 229 | foreach (var solution in RegressionSolutions) {
|
---|
| 230 | if (solution is RegressionEnsembleSolution)
|
---|
| 231 | solution.ProblemData = ProblemData;
|
---|
| 232 | else
|
---|
| 233 | solution.ProblemData = problemData;
|
---|
| 234 | }
|
---|
| 235 | foreach (var trainingPartition in trainingPartitions.Values) {
|
---|
| 236 | trainingPartition.Start = ProblemData.TrainingPartition.Start;
|
---|
| 237 | trainingPartition.End = ProblemData.TrainingPartition.End;
|
---|
| 238 | }
|
---|
| 239 | foreach (var testPartition in testPartitions.Values) {
|
---|
| 240 | testPartition.Start = ProblemData.TestPartition.Start;
|
---|
| 241 | testPartition.End = ProblemData.TestPartition.End;
|
---|
| 242 | }
|
---|
| 243 |
|
---|
| 244 | base.OnProblemDataChanged();
|
---|
| 245 | }
|
---|
| 246 |
|
---|
[13976] | 247 | private void Model_Changed(object sender, EventArgs e) {
|
---|
| 248 | var modelSet = new HashSet<IRegressionModel>(Model.Models);
|
---|
| 249 | foreach (var model in Model.Models) {
|
---|
| 250 | if (!trainingPartitions.ContainsKey(model)) trainingPartitions.Add(model, ProblemData.TrainingPartition);
|
---|
| 251 | if (!testPartitions.ContainsKey(model)) testPartitions.Add(model, ProblemData.TrainingPartition);
|
---|
| 252 | }
|
---|
| 253 | foreach (var model in trainingPartitions.Keys) {
|
---|
| 254 | if (modelSet.Contains(model)) continue;
|
---|
| 255 | trainingPartitions.Remove(model);
|
---|
| 256 | testPartitions.Remove(model);
|
---|
| 257 | }
|
---|
[8152] | 258 |
|
---|
[8167] | 259 | trainingEvaluationCache.Clear();
|
---|
| 260 | testEvaluationCache.Clear();
|
---|
| 261 | evaluationCache.Clear();
|
---|
[13976] | 262 |
|
---|
| 263 | OnModelChanged();
|
---|
[6612] | 264 | }
|
---|
[13976] | 265 |
|
---|
| 266 | public void AddRegressionSolutions(IEnumerable<IRegressionSolution> solutions) {
|
---|
| 267 | regressionSolutions.AddRange(solutions);
|
---|
| 268 | }
|
---|
[6612] | 269 | public void RemoveRegressionSolutions(IEnumerable<IRegressionSolution> solutions) {
|
---|
| 270 | regressionSolutions.RemoveRange(solutions);
|
---|
| 271 | }
|
---|
[6520] | 272 |
|
---|
[6612] | 273 | private void regressionSolutions_ItemsAdded(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
|
---|
[13976] | 274 | foreach (var solution in e.Items) {
|
---|
| 275 | trainingPartitions.Add(solution.Model, solution.ProblemData.TrainingPartition);
|
---|
| 276 | testPartitions.Add(solution.Model, solution.ProblemData.TestPartition);
|
---|
| 277 | }
|
---|
| 278 | Model.AddRange(e.Items.Select(s => s.Model));
|
---|
[6520] | 279 | }
|
---|
[6612] | 280 | private void regressionSolutions_ItemsRemoved(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
|
---|
[13976] | 281 | foreach (var solution in e.Items) {
|
---|
| 282 | trainingPartitions.Remove(solution.Model);
|
---|
| 283 | testPartitions.Remove(solution.Model);
|
---|
| 284 | }
|
---|
| 285 | Model.RemoveRange(e.Items.Select(s => s.Model));
|
---|
[6612] | 286 | }
|
---|
| 287 | private void regressionSolutions_CollectionReset(object sender, CollectionItemsChangedEventArgs<IRegressionSolution> e) {
|
---|
[13976] | 288 | foreach (var solution in e.OldItems) {
|
---|
| 289 | trainingPartitions.Remove(solution.Model);
|
---|
| 290 | testPartitions.Remove(solution.Model);
|
---|
| 291 | }
|
---|
| 292 | Model.RemoveRange(e.OldItems.Select(s => s.Model));
|
---|
[6520] | 293 |
|
---|
[13976] | 294 | foreach (var solution in e.Items) {
|
---|
| 295 | trainingPartitions.Add(solution.Model, solution.ProblemData.TrainingPartition);
|
---|
| 296 | testPartitions.Add(solution.Model, solution.ProblemData.TestPartition);
|
---|
| 297 | }
|
---|
| 298 | Model.AddRange(e.Items.Select(s => s.Model));
|
---|
[6612] | 299 | }
|
---|
[5816] | 300 | }
|
---|
| 301 | }
|
---|