1 | #region License Information
|
---|
2 |
|
---|
3 | /* HeuristicLab
|
---|
4 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
5 | *
|
---|
6 | * This file is part of HeuristicLab.
|
---|
7 | *
|
---|
8 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
9 | * it under the terms of the GNU General Public License as published by
|
---|
10 | * the Free Software Foundation, either version 3 of the License, or
|
---|
11 | * (at your option) any later version.
|
---|
12 | *
|
---|
13 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
14 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
15 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
16 | * GNU General Public License for more details.
|
---|
17 | *
|
---|
18 | * You should have received a copy of the GNU General Public License
|
---|
19 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
20 | */
|
---|
21 |
|
---|
22 | #endregion
|
---|
23 |
|
---|
24 | using System.Collections.Generic;
|
---|
25 | using System.Linq;
|
---|
26 | using HeuristicLab.Common;
|
---|
27 | using HeuristicLab.Core;
|
---|
28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
|
---|
29 | using HeuristicLab.Parameters;
|
---|
30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
|
---|
31 |
|
---|
32 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
|
---|
33 | [StorableClass]
|
---|
34 | [Item("SymbolicRegressionPruningOperator", "An operator which prunes symbolic regression trees.")]
|
---|
35 | public class SymbolicRegressionPruningOperator : SymbolicDataAnalysisExpressionPruningOperator {
|
---|
36 | private const string EvaluatorParameterName = "Evaluator";
|
---|
37 |
|
---|
38 | #region parameter properties
|
---|
39 | public ILookupParameter<ISymbolicRegressionSingleObjectiveEvaluator> EvaluatorParameter {
|
---|
40 | get { return (ILookupParameter<ISymbolicRegressionSingleObjectiveEvaluator>)Parameters[EvaluatorParameterName]; }
|
---|
41 | }
|
---|
42 | #endregion
|
---|
43 |
|
---|
44 | protected SymbolicRegressionPruningOperator(SymbolicRegressionPruningOperator original, Cloner cloner)
|
---|
45 | : base(original, cloner) {
|
---|
46 | }
|
---|
47 | public override IDeepCloneable Clone(Cloner cloner) {
|
---|
48 | return new SymbolicRegressionPruningOperator(this, cloner);
|
---|
49 | }
|
---|
50 |
|
---|
51 | [StorableConstructor]
|
---|
52 | protected SymbolicRegressionPruningOperator(bool deserializing) : base(deserializing) { }
|
---|
53 |
|
---|
54 | public SymbolicRegressionPruningOperator(ISymbolicDataAnalysisSolutionImpactValuesCalculator impactValuesCalculator)
|
---|
55 | : base(impactValuesCalculator) {
|
---|
56 | Parameters.Add(new LookupParameter<ISymbolicRegressionSingleObjectiveEvaluator>(EvaluatorParameterName));
|
---|
57 | }
|
---|
58 |
|
---|
59 | [StorableHook(HookType.AfterDeserialization)]
|
---|
60 | private void AfterDeserialization() {
|
---|
61 | // BackwardsCompatibility3.3
|
---|
62 | #region Backwards compatible code, remove with 3.4
|
---|
63 | base.ImpactValuesCalculator = new SymbolicRegressionSolutionImpactValuesCalculator();
|
---|
64 | if (!Parameters.ContainsKey(EvaluatorParameterName)) {
|
---|
65 | Parameters.Add(new LookupParameter<ISymbolicRegressionSingleObjectiveEvaluator>(EvaluatorParameterName));
|
---|
66 | }
|
---|
67 | #endregion
|
---|
68 | }
|
---|
69 |
|
---|
70 | protected override ISymbolicDataAnalysisModel CreateModel(ISymbolicExpressionTree tree, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, IDataAnalysisProblemData problemData, DoubleLimit estimationLimits) {
|
---|
71 | var regressionProblemData = (IRegressionProblemData)problemData;
|
---|
72 | return new SymbolicRegressionModel(regressionProblemData.TargetVariable, tree, interpreter, estimationLimits.Lower, estimationLimits.Upper);
|
---|
73 | }
|
---|
74 |
|
---|
75 | protected override double Evaluate(IDataAnalysisModel model) {
|
---|
76 | var regressionModel = (ISymbolicRegressionModel)model;
|
---|
77 | var regressionProblemData = (IRegressionProblemData)ProblemDataParameter.ActualValue;
|
---|
78 | var evaluator = EvaluatorParameter.ActualValue;
|
---|
79 | var fitnessEvaluationPartition = FitnessCalculationPartitionParameter.ActualValue;
|
---|
80 | var rows = Enumerable.Range(fitnessEvaluationPartition.Start, fitnessEvaluationPartition.Size);
|
---|
81 | return evaluator.Evaluate(this.ExecutionContext, regressionModel.SymbolicExpressionTree, regressionProblemData, rows);
|
---|
82 | }
|
---|
83 |
|
---|
84 | public static ISymbolicExpressionTree Prune(ISymbolicExpressionTree tree, SymbolicRegressionSolutionImpactValuesCalculator impactValuesCalculator, ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, IRegressionProblemData problemData, DoubleLimit estimationLimits, IEnumerable<int> rows, double nodeImpactThreshold = 0.0, bool pruneOnlyZeroImpactNodes = false) {
|
---|
85 | var clonedTree = (ISymbolicExpressionTree)tree.Clone();
|
---|
86 | var model = new SymbolicRegressionModel(problemData.TargetVariable, clonedTree, interpreter, estimationLimits.Lower, estimationLimits.Upper);
|
---|
87 | var nodes = clonedTree.Root.GetSubtree(0).GetSubtree(0).IterateNodesPrefix().ToList(); // skip the nodes corresponding to the ProgramRootSymbol and the StartSymbol
|
---|
88 |
|
---|
89 | double qualityForImpactsCalculation = double.NaN; // pass a NaN value initially so the impact calculator will calculate the quality
|
---|
90 |
|
---|
91 | for (int i = 0; i < nodes.Count; ++i) {
|
---|
92 | var node = nodes[i];
|
---|
93 | if (node is ConstantTreeNode) continue;
|
---|
94 |
|
---|
95 | double impactValue, replacementValue;
|
---|
96 | double newQualityForImpactsCalculation;
|
---|
97 | impactValuesCalculator.CalculateImpactAndReplacementValues(model, node, problemData, rows, out impactValue, out replacementValue, out newQualityForImpactsCalculation, qualityForImpactsCalculation);
|
---|
98 |
|
---|
99 | if (pruneOnlyZeroImpactNodes && !impactValue.IsAlmost(0.0)) continue;
|
---|
100 | if (!pruneOnlyZeroImpactNodes && impactValue > nodeImpactThreshold) continue;
|
---|
101 |
|
---|
102 | var constantNode = (ConstantTreeNode)node.Grammar.GetSymbol("Constant").CreateTreeNode();
|
---|
103 | constantNode.Value = replacementValue;
|
---|
104 |
|
---|
105 | ReplaceWithConstant(node, constantNode);
|
---|
106 | i += node.GetLength() - 1; // skip subtrees under the node that was folded
|
---|
107 |
|
---|
108 | qualityForImpactsCalculation = newQualityForImpactsCalculation;
|
---|
109 | }
|
---|
110 | return model.SymbolicExpressionTree;
|
---|
111 | }
|
---|
112 | }
|
---|
113 | }
|
---|