[5618] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[17181] | 3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[5618] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System.Linq;
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| 23 | using HeuristicLab.Common;
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| 24 | using HeuristicLab.Core;
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[12281] | 25 | using HeuristicLab.Optimization;
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[5716] | 26 | using HeuristicLab.Parameters;
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[17097] | 27 | using HEAL.Attic;
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[5618] | 28 |
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| 29 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
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[12708] | 30 | [Item("Symbolic Regression Problem (single-objective)", "Represents a single objective symbolic regression problem.")]
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[17097] | 31 | [StorableType("7DDCF683-96FC-4F70-BF4F-FE3A0B0DE6E0")]
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[12708] | 32 | [Creatable(CreatableAttribute.Categories.GeneticProgrammingProblems, Priority = 100)]
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[5759] | 33 | public class SymbolicRegressionSingleObjectiveProblem : SymbolicDataAnalysisSingleObjectiveProblem<IRegressionProblemData, ISymbolicRegressionSingleObjectiveEvaluator, ISymbolicDataAnalysisSolutionCreator>, IRegressionProblem {
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[5618] | 34 | private const double PunishmentFactor = 10;
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[5685] | 35 | private const int InitialMaximumTreeDepth = 8;
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| 36 | private const int InitialMaximumTreeLength = 25;
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[5770] | 37 | private const string EstimationLimitsParameterName = "EstimationLimits";
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| 38 | private const string EstimationLimitsParameterDescription = "The limits for the estimated value that can be returned by the symbolic regression model.";
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[5716] | 39 |
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[5685] | 40 | #region parameter properties
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[5770] | 41 | public IFixedValueParameter<DoubleLimit> EstimationLimitsParameter {
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| 42 | get { return (IFixedValueParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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[5685] | 43 | }
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| 44 | #endregion
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| 45 | #region properties
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[5770] | 46 | public DoubleLimit EstimationLimits {
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| 47 | get { return EstimationLimitsParameter.Value; }
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[5685] | 48 | }
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| 49 | #endregion
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[5618] | 50 | [StorableConstructor]
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[17097] | 51 | protected SymbolicRegressionSingleObjectiveProblem(StorableConstructorFlag _) : base(_) { }
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[8175] | 52 | protected SymbolicRegressionSingleObjectiveProblem(SymbolicRegressionSingleObjectiveProblem original, Cloner cloner)
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| 53 | : base(original, cloner) {
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| 54 | RegisterEventHandlers();
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| 55 | }
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[5618] | 56 | public override IDeepCloneable Clone(Cloner cloner) { return new SymbolicRegressionSingleObjectiveProblem(this, cloner); }
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| 57 |
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| 58 | public SymbolicRegressionSingleObjectiveProblem()
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| 59 | : base(new RegressionProblemData(), new SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator(), new SymbolicDataAnalysisExpressionTreeCreator()) {
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[5847] | 60 | Parameters.Add(new FixedValueParameter<DoubleLimit>(EstimationLimitsParameterName, EstimationLimitsParameterDescription));
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[5685] | 61 |
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[5854] | 62 | EstimationLimitsParameter.Hidden = true;
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| 63 |
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[8664] | 64 |
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| 65 | ApplyLinearScalingParameter.Value.Value = true;
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[5618] | 66 | Maximization.Value = true;
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[5685] | 67 | MaximumSymbolicExpressionTreeDepth.Value = InitialMaximumTreeDepth;
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| 68 | MaximumSymbolicExpressionTreeLength.Value = InitialMaximumTreeLength;
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| 69 |
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[8175] | 70 | RegisterEventHandlers();
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[6803] | 71 | ConfigureGrammarSymbols();
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[5685] | 72 | InitializeOperators();
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[5716] | 73 | UpdateEstimationLimits();
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[5618] | 74 | }
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| 75 |
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[8130] | 76 | [StorableHook(HookType.AfterDeserialization)]
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| 77 | private void AfterDeserialization() {
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[8175] | 78 | RegisterEventHandlers();
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[8130] | 79 | // compatibility
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| 80 | bool changed = false;
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| 81 | if (!Operators.OfType<SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer>().Any()) {
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| 82 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer());
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| 83 | changed = true;
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| 84 | }
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| 85 | if (!Operators.OfType<SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer>().Any()) {
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| 86 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer());
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| 87 | changed = true;
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| 88 | }
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[10907] | 89 | if (!Operators.OfType<SymbolicRegressionSolutionsAnalyzer>().Any()) {
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| 90 | Operators.Add(new SymbolicRegressionSolutionsAnalyzer());
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| 91 | changed = true;
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| 92 | }
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[8130] | 93 | if (changed) {
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| 94 | ParameterizeOperators();
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| 95 | }
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| 96 | }
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| 97 |
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[8175] | 98 | private void RegisterEventHandlers() {
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| 99 | SymbolicExpressionTreeGrammarParameter.ValueChanged += (o, e) => ConfigureGrammarSymbols();
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| 100 | }
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| 101 |
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[6803] | 102 | private void ConfigureGrammarSymbols() {
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| 103 | var grammar = SymbolicExpressionTreeGrammar as TypeCoherentExpressionGrammar;
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| 104 | if (grammar != null) grammar.ConfigureAsDefaultRegressionGrammar();
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| 105 | }
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| 106 |
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[5685] | 107 | private void InitializeOperators() {
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| 108 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingBestSolutionAnalyzer());
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| 109 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationBestSolutionAnalyzer());
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[5747] | 110 | Operators.Add(new SymbolicRegressionSingleObjectiveOverfittingAnalyzer());
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[7726] | 111 | Operators.Add(new SymbolicRegressionSingleObjectiveTrainingParetoBestSolutionAnalyzer());
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[7734] | 112 | Operators.Add(new SymbolicRegressionSingleObjectiveValidationParetoBestSolutionAnalyzer());
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[10907] | 113 | Operators.Add(new SymbolicRegressionSolutionsAnalyzer());
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[12281] | 114 | Operators.Add(new SymbolicExpressionTreePhenotypicSimilarityCalculator());
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| 115 | Operators.Add(new SymbolicRegressionPhenotypicDiversityAnalyzer(Operators.OfType<SymbolicExpressionTreePhenotypicSimilarityCalculator>()) { DiversityResultName = "Phenotypic Diversity" });
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[5685] | 116 | ParameterizeOperators();
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| 117 | }
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[5716] | 118 |
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[5685] | 119 | private void UpdateEstimationLimits() {
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[8139] | 120 | if (ProblemData.TrainingIndices.Any()) {
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| 121 | var targetValues = ProblemData.Dataset.GetDoubleValues(ProblemData.TargetVariable, ProblemData.TrainingIndices).ToList();
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[5618] | 122 | var mean = targetValues.Average();
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| 123 | var range = targetValues.Max() - targetValues.Min();
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[5770] | 124 | EstimationLimits.Upper = mean + PunishmentFactor * range;
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| 125 | EstimationLimits.Lower = mean - PunishmentFactor * range;
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[6754] | 126 | } else {
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| 127 | EstimationLimits.Upper = double.MaxValue;
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| 128 | EstimationLimits.Lower = double.MinValue;
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[5618] | 129 | }
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| 130 | }
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[5623] | 131 |
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[5685] | 132 | protected override void OnProblemDataChanged() {
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| 133 | base.OnProblemDataChanged();
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| 134 | UpdateEstimationLimits();
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| 135 | }
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| 136 |
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| 137 | protected override void ParameterizeOperators() {
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| 138 | base.ParameterizeOperators();
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[5770] | 139 | if (Parameters.ContainsKey(EstimationLimitsParameterName)) {
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| 140 | var operators = Parameters.OfType<IValueParameter>().Select(p => p.Value).OfType<IOperator>().Union(Operators);
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| 141 | foreach (var op in operators.OfType<ISymbolicDataAnalysisBoundedOperator>()) {
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| 142 | op.EstimationLimitsParameter.ActualName = EstimationLimitsParameter.Name;
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| 143 | }
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[5685] | 144 | }
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[12281] | 145 |
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| 146 | foreach (var op in Operators.OfType<ISolutionSimilarityCalculator>()) {
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| 147 | op.SolutionVariableName = SolutionCreator.SymbolicExpressionTreeParameter.ActualName;
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| 148 | op.QualityVariableName = Evaluator.QualityParameter.ActualName;
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| 149 |
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| 150 | if (op is SymbolicExpressionTreePhenotypicSimilarityCalculator) {
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| 151 | var phenotypicSimilarityCalculator = (SymbolicExpressionTreePhenotypicSimilarityCalculator)op;
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| 152 | phenotypicSimilarityCalculator.ProblemData = ProblemData;
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| 153 | phenotypicSimilarityCalculator.Interpreter = SymbolicExpressionTreeInterpreter;
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| 154 | }
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| 155 | }
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[5685] | 156 | }
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[5618] | 157 | }
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| 158 | }
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