[11407] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[17181] | 3 | * Copyright (C) Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[11407] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[12147] | 22 | using System;
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[11407] | 23 | using System.Collections.Generic;
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| 24 | using System.Linq;
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| 25 | using HeuristicLab.Common;
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| 26 | using HeuristicLab.Core;
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| 27 | using HeuristicLab.Data;
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| 28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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[17097] | 29 | using HEAL.Attic;
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[11407] | 30 |
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| 31 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Regression {
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| 32 | [Item("Pearson R² & Nested Tree size Evaluator", "Calculates the Pearson R² and the nested tree size of a symbolic regression solution.")]
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[17097] | 33 | [StorableType("37486F27-9BA0-4C89-BB2F-6823E4FB317A")]
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[11883] | 34 | public class PearsonRSquaredNestedTreeSizeEvaluator : SymbolicRegressionMultiObjectiveEvaluator {
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[11407] | 35 | [StorableConstructor]
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[17097] | 36 | protected PearsonRSquaredNestedTreeSizeEvaluator(StorableConstructorFlag _) : base(_) { }
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[11883] | 37 | protected PearsonRSquaredNestedTreeSizeEvaluator(PearsonRSquaredNestedTreeSizeEvaluator original, Cloner cloner)
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[11407] | 38 | : base(original, cloner) {
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| 39 | }
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| 40 | public override IDeepCloneable Clone(Cloner cloner) {
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[11883] | 41 | return new PearsonRSquaredNestedTreeSizeEvaluator(this, cloner);
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[11407] | 42 | }
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| 43 |
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[12848] | 44 | public PearsonRSquaredNestedTreeSizeEvaluator() : base() { }
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[11407] | 45 |
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[13310] | 46 | public override IEnumerable<bool> Maximization { get { return new bool[2] { true, false }; } } // maximize R² & minimize nested tree size
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[11407] | 47 |
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| 48 | public override IOperation InstrumentedApply() {
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| 49 | IEnumerable<int> rows = GenerateRowsToEvaluate();
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| 50 | var solution = SymbolicExpressionTreeParameter.ActualValue;
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[11883] | 51 | var problemData = ProblemDataParameter.ActualValue;
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| 52 | var interpreter = SymbolicDataAnalysisTreeInterpreterParameter.ActualValue;
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| 53 | var estimationLimits = EstimationLimitsParameter.ActualValue;
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| 54 | var applyLinearScaling = ApplyLinearScalingParameter.ActualValue.Value;
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| 55 |
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| 56 | if (UseConstantOptimization) {
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[14004] | 57 | SymbolicRegressionConstantOptimizationEvaluator.OptimizeConstants(interpreter, solution, problemData, rows, applyLinearScaling, ConstantOptimizationIterations, updateVariableWeights: ConstantOptimizationUpdateVariableWeights,lowerEstimationLimit: estimationLimits.Lower, upperEstimationLimit: estimationLimits.Upper);
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[11883] | 58 | }
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| 59 |
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[12848] | 60 | double[] qualities = Calculate(SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, solution, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper, ProblemDataParameter.ActualValue, rows, ApplyLinearScalingParameter.ActualValue.Value, DecimalPlaces);
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[11407] | 61 | QualitiesParameter.ActualValue = new DoubleArray(qualities);
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| 62 | return base.InstrumentedApply();
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| 63 | }
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| 64 |
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[12848] | 65 | public static double[] Calculate(ISymbolicDataAnalysisExpressionTreeInterpreter interpreter, ISymbolicExpressionTree solution, double lowerEstimationLimit, double upperEstimationLimit, IRegressionProblemData problemData, IEnumerable<int> rows, bool applyLinearScaling, int decimalPlaces) {
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[11407] | 66 | double r2 = SymbolicRegressionSingleObjectivePearsonRSquaredEvaluator.Calculate(interpreter, solution, lowerEstimationLimit, upperEstimationLimit, problemData, rows, applyLinearScaling);
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[12848] | 67 | if (decimalPlaces >= 0)
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| 68 | r2 = Math.Round(r2, decimalPlaces);
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[13310] | 69 | return new double[2] { r2, solution.IterateNodesPostfix().Sum(n => n.GetLength()) }; // sum of the length of the whole sub-tree for each node
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[11407] | 70 | }
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| 71 |
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| 72 | public override double[] Evaluate(IExecutionContext context, ISymbolicExpressionTree tree, IRegressionProblemData problemData, IEnumerable<int> rows) {
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| 73 | SymbolicDataAnalysisTreeInterpreterParameter.ExecutionContext = context;
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| 74 | EstimationLimitsParameter.ExecutionContext = context;
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| 75 | ApplyLinearScalingParameter.ExecutionContext = context;
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[13310] | 76 | // DecimalPlaces parameter is a FixedValueParameter and doesn't need the context.
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[11407] | 77 |
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[13310] | 78 | double[] quality = Calculate(SymbolicDataAnalysisTreeInterpreterParameter.ActualValue, tree, EstimationLimitsParameter.ActualValue.Lower, EstimationLimitsParameter.ActualValue.Upper, problemData, rows, ApplyLinearScalingParameter.ActualValue.Value, DecimalPlaces);
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[11407] | 79 |
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| 80 | SymbolicDataAnalysisTreeInterpreterParameter.ExecutionContext = null;
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| 81 | EstimationLimitsParameter.ExecutionContext = null;
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| 82 | ApplyLinearScalingParameter.ExecutionContext = null;
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| 83 |
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| 84 | return quality;
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| 85 | }
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| 86 | }
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| 87 | }
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