[11219] | 1 | #region License Information
|
---|
| 2 | /* HeuristicLab
|
---|
[12012] | 3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
[11219] | 4 | *
|
---|
| 5 | * This file is part of HeuristicLab.
|
---|
| 6 | *
|
---|
| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
| 8 | * it under the terms of the GNU General Public License as published by
|
---|
| 9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
| 10 | * (at your option) any later version.
|
---|
| 11 | *
|
---|
| 12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
| 15 | * GNU General Public License for more details.
|
---|
| 16 | *
|
---|
| 17 | * You should have received a copy of the GNU General Public License
|
---|
| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
| 19 | */
|
---|
| 20 | #endregion
|
---|
| 21 |
|
---|
| 22 | using System;
|
---|
| 23 | using HeuristicLab.Common;
|
---|
| 24 | using HeuristicLab.Core;
|
---|
| 25 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
|
---|
| 26 | using HeuristicLab.Optimization.Operators;
|
---|
| 27 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
|
---|
| 28 |
|
---|
[11221] | 29 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
|
---|
[11219] | 30 | [StorableClass]
|
---|
[11910] | 31 | [Item("SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator", "A similarity calculator based on the size of the maximum common subtree between two trees")]
|
---|
[12086] | 32 | public class SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator : SolutionSimilarityCalculator {
|
---|
[11888] | 33 | [Storable]
|
---|
[11910] | 34 | private readonly SymbolicExpressionTreeNodeEqualityComparer comparer;
|
---|
[11888] | 35 | public bool MatchVariableWeights {
|
---|
| 36 | get { return comparer.MatchVariableWeights; }
|
---|
| 37 | set { comparer.MatchVariableWeights = value; }
|
---|
[11219] | 38 | }
|
---|
| 39 |
|
---|
[11888] | 40 | public bool MatchConstantValues {
|
---|
| 41 | get { return comparer.MatchConstantValues; }
|
---|
| 42 | set { comparer.MatchConstantValues = value; }
|
---|
| 43 | }
|
---|
| 44 |
|
---|
[12086] | 45 | protected override bool IsCommutative { get { return true; } }
|
---|
| 46 |
|
---|
[11888] | 47 | [StorableConstructor]
|
---|
[11910] | 48 | protected SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(bool deserializing) : base(deserializing) { }
|
---|
[11888] | 49 |
|
---|
[11219] | 50 | public override IDeepCloneable Clone(Cloner cloner) {
|
---|
[11910] | 51 | return new SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(this, cloner);
|
---|
[11219] | 52 | }
|
---|
| 53 |
|
---|
[11910] | 54 | protected SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator original, Cloner cloner)
|
---|
[11888] | 55 | : base(original, cloner) {
|
---|
[11889] | 56 | comparer = cloner.Clone(original.comparer);
|
---|
[11888] | 57 | }
|
---|
| 58 |
|
---|
[11910] | 59 | public SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator() {
|
---|
| 60 | comparer = new SymbolicExpressionTreeNodeEqualityComparer {
|
---|
[11888] | 61 | MatchConstantValues = true,
|
---|
| 62 | MatchVariableNames = true,
|
---|
| 63 | MatchVariableWeights = true
|
---|
| 64 | };
|
---|
| 65 | }
|
---|
| 66 |
|
---|
[11910] | 67 | public SymbolicExpressionTreeMaxCommonSubtreeSimilarityCalculator(bool matchVariableWeights, bool matchConstantValues) {
|
---|
| 68 | comparer = new SymbolicExpressionTreeNodeEqualityComparer {
|
---|
[11888] | 69 | MatchConstantValues = matchConstantValues,
|
---|
[11889] | 70 | MatchVariableNames = true,
|
---|
[11888] | 71 | MatchVariableWeights = matchVariableWeights
|
---|
| 72 | };
|
---|
| 73 | }
|
---|
| 74 |
|
---|
| 75 | public double CalculateSimilarity(ISymbolicExpressionTree t1, ISymbolicExpressionTree t2) {
|
---|
| 76 | return MaxCommonSubtreeSimilarity(t1, t2, comparer);
|
---|
| 77 | }
|
---|
| 78 |
|
---|
[11219] | 79 | public override double CalculateSolutionSimilarity(IScope leftSolution, IScope rightSolution) {
|
---|
| 80 | var t1 = leftSolution.Variables[SolutionVariableName].Value as ISymbolicExpressionTree;
|
---|
| 81 | var t2 = rightSolution.Variables[SolutionVariableName].Value as ISymbolicExpressionTree;
|
---|
| 82 |
|
---|
| 83 | if (t1 == null || t2 == null)
|
---|
| 84 | throw new ArgumentException("Cannot calculate similarity when one of the arguments is null.");
|
---|
| 85 |
|
---|
| 86 | return MaxCommonSubtreeSimilarity(t1, t2, comparer);
|
---|
| 87 | }
|
---|
| 88 |
|
---|
[12086] | 89 |
|
---|
[11239] | 90 | public static double MaxCommonSubtreeSimilarity(ISymbolicExpressionTree a, ISymbolicExpressionTree b, ISymbolicExpressionTreeNodeSimilarityComparer comparer) {
|
---|
[11219] | 91 | int max = 0;
|
---|
| 92 | var rootA = a.Root.GetSubtree(0).GetSubtree(0);
|
---|
| 93 | var rootB = b.Root.GetSubtree(0).GetSubtree(0);
|
---|
| 94 | foreach (var aa in rootA.IterateNodesBreadth()) {
|
---|
| 95 | int lenA = aa.GetLength();
|
---|
| 96 | if (lenA <= max) continue;
|
---|
| 97 | foreach (var bb in rootB.IterateNodesBreadth()) {
|
---|
| 98 | int lenB = bb.GetLength();
|
---|
| 99 | if (lenB <= max) continue;
|
---|
| 100 | int matches = SymbolicExpressionTreeMatching.Match(aa, bb, comparer);
|
---|
[11888] | 101 | if (max < matches)
|
---|
[11230] | 102 | max = matches;
|
---|
[11219] | 103 | }
|
---|
| 104 | }
|
---|
| 105 | return 2.0 * max / (rootA.GetLength() + rootB.GetLength());
|
---|
| 106 | }
|
---|
| 107 | }
|
---|
| 108 | }
|
---|