[5571] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[12012] | 3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[5571] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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| 22 | using System;
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| 23 | using System.Collections.Generic;
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[9739] | 24 | using System.Linq;
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[5571] | 25 | using HeuristicLab.Common;
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| 26 | using HeuristicLab.Core;
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[6740] | 27 | using HeuristicLab.Data;
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[5571] | 28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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[6740] | 29 | using HeuristicLab.Parameters;
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[5571] | 30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 31 |
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| 32 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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| 33 | [StorableClass]
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[9815] | 34 | [Item("SymbolicDataAnalysisExpressionTreeLinearInterpreter", "Fast linear (non-recursive) interpreter for symbolic expression trees. Does not support ADFs.")]
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[9758] | 35 | public sealed class SymbolicDataAnalysisExpressionTreeLinearInterpreter : ParameterizedNamedItem, ISymbolicDataAnalysisExpressionTreeInterpreter {
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[5749] | 36 | private const string CheckExpressionsWithIntervalArithmeticParameterName = "CheckExpressionsWithIntervalArithmetic";
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[7615] | 37 | private const string EvaluatedSolutionsParameterName = "EvaluatedSolutions";
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[5571] | 38 |
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[9776] | 39 | private SymbolicDataAnalysisExpressionTreeInterpreter interpreter;
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| 40 |
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[9732] | 41 | public override bool CanChangeName {
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| 42 | get { return false; }
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| 43 | }
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[5571] | 44 |
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[9732] | 45 | public override bool CanChangeDescription {
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| 46 | get { return false; }
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| 47 | }
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| 48 |
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[5749] | 49 | #region parameter properties
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| 50 | public IValueParameter<BoolValue> CheckExpressionsWithIntervalArithmeticParameter {
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| 51 | get { return (IValueParameter<BoolValue>)Parameters[CheckExpressionsWithIntervalArithmeticParameterName]; }
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| 52 | }
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[7615] | 53 |
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| 54 | public IValueParameter<IntValue> EvaluatedSolutionsParameter {
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| 55 | get { return (IValueParameter<IntValue>)Parameters[EvaluatedSolutionsParameterName]; }
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| 56 | }
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[5749] | 57 | #endregion
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| 58 |
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| 59 | #region properties
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| 60 | public BoolValue CheckExpressionsWithIntervalArithmetic {
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| 61 | get { return CheckExpressionsWithIntervalArithmeticParameter.Value; }
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| 62 | set { CheckExpressionsWithIntervalArithmeticParameter.Value = value; }
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| 63 | }
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[7615] | 64 | public IntValue EvaluatedSolutions {
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| 65 | get { return EvaluatedSolutionsParameter.Value; }
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| 66 | set { EvaluatedSolutionsParameter.Value = value; }
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| 67 | }
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[5749] | 68 | #endregion
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| 69 |
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[5571] | 70 | [StorableConstructor]
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[9758] | 71 | private SymbolicDataAnalysisExpressionTreeLinearInterpreter(bool deserializing)
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[9732] | 72 | : base(deserializing) {
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| 73 | }
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| 74 |
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[9828] | 75 | private SymbolicDataAnalysisExpressionTreeLinearInterpreter(SymbolicDataAnalysisExpressionTreeLinearInterpreter original, Cloner cloner)
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[9732] | 76 | : base(original, cloner) {
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[9828] | 77 | interpreter = cloner.Clone(original.interpreter);
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[9732] | 78 | }
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| 79 |
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[5571] | 80 | public override IDeepCloneable Clone(Cloner cloner) {
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[9734] | 81 | return new SymbolicDataAnalysisExpressionTreeLinearInterpreter(this, cloner);
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[5571] | 82 | }
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| 83 |
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[9734] | 84 | public SymbolicDataAnalysisExpressionTreeLinearInterpreter()
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[9758] | 85 | : base("SymbolicDataAnalysisExpressionTreeLinearInterpreter", "Linear (non-recursive) interpreter for symbolic expression trees (does not support ADFs).") {
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[9734] | 86 | Parameters.Add(new ValueParameter<BoolValue>(CheckExpressionsWithIntervalArithmeticParameterName, "Switch that determines if the interpreter checks the validity of expressions with interval arithmetic before evaluating the expression.", new BoolValue(false)));
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| 87 | Parameters.Add(new ValueParameter<IntValue>(EvaluatedSolutionsParameterName, "A counter for the total number of solutions the interpreter has evaluated", new IntValue(0)));
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[9776] | 88 | interpreter = new SymbolicDataAnalysisExpressionTreeInterpreter();
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[5571] | 89 | }
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| 90 |
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[7615] | 91 | [StorableHook(HookType.AfterDeserialization)]
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| 92 | private void AfterDeserialization() {
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[9776] | 93 | if (interpreter == null) interpreter = new SymbolicDataAnalysisExpressionTreeInterpreter();
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[7615] | 94 | }
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| 95 |
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| 96 | #region IStatefulItem
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| 97 | public void InitializeState() {
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| 98 | EvaluatedSolutions.Value = 0;
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| 99 | }
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| 100 |
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[9828] | 101 | public void ClearState() { }
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[7615] | 102 | #endregion
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| 103 |
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[9734] | 104 | public IEnumerable<double> GetSymbolicExpressionTreeValues(ISymbolicExpressionTree tree, Dataset dataset, IEnumerable<int> rows) {
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[8436] | 105 | if (CheckExpressionsWithIntervalArithmetic.Value)
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[9734] | 106 | throw new NotSupportedException("Interval arithmetic is not yet supported in the symbolic data analysis interpreter.");
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[7120] | 107 |
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[9004] | 108 | lock (EvaluatedSolutions) {
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| 109 | EvaluatedSolutions.Value++; // increment the evaluated solutions counter
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| 110 | }
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[8436] | 111 |
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[9739] | 112 | var code = SymbolicExpressionTreeLinearCompiler.Compile(tree, OpCodes.MapSymbolToOpCode);
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[9758] | 113 | PrepareInstructions(code, dataset);
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[9818] | 114 | return rows.Select(row => Evaluate(dataset, row, code));
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[9739] | 115 | }
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[9732] | 116 |
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[9818] | 117 | private double Evaluate(Dataset dataset, int row, LinearInstruction[] code) {
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[9732] | 118 | for (int i = code.Length - 1; i >= 0; --i) {
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[9776] | 119 | if (code[i].skip) continue;
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[9871] | 120 | #region opcode if
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[9732] | 121 | var instr = code[i];
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[9871] | 122 | if (instr.opCode == OpCodes.Variable) {
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| 123 | if (row < 0 || row >= dataset.Rows) instr.value = double.NaN;
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| 124 | var variableTreeNode = (VariableTreeNode)instr.dynamicNode;
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| 125 | instr.value = ((IList<double>)instr.data)[row] * variableTreeNode.Weight;
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| 126 | } else if (instr.opCode == OpCodes.LagVariable) {
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| 127 | var laggedVariableTreeNode = (LaggedVariableTreeNode)instr.dynamicNode;
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| 128 | int actualRow = row + laggedVariableTreeNode.Lag;
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| 129 | if (actualRow < 0 || actualRow >= dataset.Rows)
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| 130 | instr.value = double.NaN;
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| 131 | else
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| 132 | instr.value = ((IList<double>)instr.data)[actualRow] * laggedVariableTreeNode.Weight;
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| 133 | } else if (instr.opCode == OpCodes.VariableCondition) {
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| 134 | if (row < 0 || row >= dataset.Rows) instr.value = double.NaN;
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| 135 | var variableConditionTreeNode = (VariableConditionTreeNode)instr.dynamicNode;
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| 136 | double variableValue = ((IList<double>)instr.data)[row];
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| 137 | double x = variableValue - variableConditionTreeNode.Threshold;
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| 138 | double p = 1 / (1 + Math.Exp(-variableConditionTreeNode.Slope * x));
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[9738] | 139 |
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[9871] | 140 | double trueBranch = code[instr.childIndex].value;
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| 141 | double falseBranch = code[instr.childIndex + 1].value;
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[9738] | 142 |
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[9871] | 143 | instr.value = trueBranch * p + falseBranch * (1 - p);
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| 144 | } else if (instr.opCode == OpCodes.Add) {
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| 145 | double s = code[instr.childIndex].value;
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| 146 | for (int j = 1; j != instr.nArguments; ++j) {
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| 147 | s += code[instr.childIndex + j].value;
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| 148 | }
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| 149 | instr.value = s;
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| 150 | } else if (instr.opCode == OpCodes.Sub) {
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| 151 | double s = code[instr.childIndex].value;
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| 152 | for (int j = 1; j != instr.nArguments; ++j) {
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| 153 | s -= code[instr.childIndex + j].value;
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| 154 | }
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| 155 | if (instr.nArguments == 1) s = -s;
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| 156 | instr.value = s;
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| 157 | } else if (instr.opCode == OpCodes.Mul) {
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| 158 | double p = code[instr.childIndex].value;
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| 159 | for (int j = 1; j != instr.nArguments; ++j) {
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| 160 | p *= code[instr.childIndex + j].value;
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| 161 | }
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| 162 | instr.value = p;
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| 163 | } else if (instr.opCode == OpCodes.Div) {
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| 164 | double p = code[instr.childIndex].value;
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| 165 | for (int j = 1; j != instr.nArguments; ++j) {
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| 166 | p /= code[instr.childIndex + j].value;
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| 167 | }
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| 168 | if (instr.nArguments == 1) p = 1.0 / p;
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| 169 | instr.value = p;
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| 170 | } else if (instr.opCode == OpCodes.Average) {
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| 171 | double s = code[instr.childIndex].value;
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| 172 | for (int j = 1; j != instr.nArguments; ++j) {
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| 173 | s += code[instr.childIndex + j].value;
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| 174 | }
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| 175 | instr.value = s / instr.nArguments;
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| 176 | } else if (instr.opCode == OpCodes.Cos) {
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| 177 | instr.value = Math.Cos(code[instr.childIndex].value);
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| 178 | } else if (instr.opCode == OpCodes.Sin) {
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| 179 | instr.value = Math.Sin(code[instr.childIndex].value);
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| 180 | } else if (instr.opCode == OpCodes.Tan) {
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| 181 | instr.value = Math.Tan(code[instr.childIndex].value);
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| 182 | } else if (instr.opCode == OpCodes.Square) {
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| 183 | instr.value = Math.Pow(code[instr.childIndex].value, 2);
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| 184 | } else if (instr.opCode == OpCodes.Power) {
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| 185 | double x = code[instr.childIndex].value;
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| 186 | double y = Math.Round(code[instr.childIndex + 1].value);
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| 187 | instr.value = Math.Pow(x, y);
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| 188 | } else if (instr.opCode == OpCodes.SquareRoot) {
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| 189 | instr.value = Math.Sqrt(code[instr.childIndex].value);
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| 190 | } else if (instr.opCode == OpCodes.Root) {
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| 191 | double x = code[instr.childIndex].value;
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| 192 | double y = code[instr.childIndex + 1].value;
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| 193 | instr.value = Math.Pow(x, 1 / y);
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| 194 | } else if (instr.opCode == OpCodes.Exp) {
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| 195 | instr.value = Math.Exp(code[instr.childIndex].value);
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| 196 | } else if (instr.opCode == OpCodes.Log) {
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| 197 | instr.value = Math.Log(code[instr.childIndex].value);
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| 198 | } else if (instr.opCode == OpCodes.Gamma) {
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| 199 | var x = code[instr.childIndex].value;
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| 200 | instr.value = double.IsNaN(x) ? double.NaN : alglib.gammafunction(x);
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| 201 | } else if (instr.opCode == OpCodes.Psi) {
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| 202 | var x = code[instr.childIndex].value;
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| 203 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 204 | else if (x <= 0 && (Math.Floor(x) - x).IsAlmost(0)) instr.value = double.NaN;
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| 205 | else instr.value = alglib.psi(x);
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| 206 | } else if (instr.opCode == OpCodes.Dawson) {
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| 207 | var x = code[instr.childIndex].value;
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| 208 | instr.value = double.IsNaN(x) ? double.NaN : alglib.dawsonintegral(x);
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| 209 | } else if (instr.opCode == OpCodes.ExponentialIntegralEi) {
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| 210 | var x = code[instr.childIndex].value;
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| 211 | instr.value = double.IsNaN(x) ? double.NaN : alglib.exponentialintegralei(x);
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| 212 | } else if (instr.opCode == OpCodes.SineIntegral) {
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| 213 | double si, ci;
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| 214 | var x = code[instr.childIndex].value;
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| 215 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 216 | else {
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| 217 | alglib.sinecosineintegrals(x, out si, out ci);
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| 218 | instr.value = si;
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| 219 | }
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| 220 | } else if (instr.opCode == OpCodes.CosineIntegral) {
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| 221 | double si, ci;
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| 222 | var x = code[instr.childIndex].value;
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| 223 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 224 | else {
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| 225 | alglib.sinecosineintegrals(x, out si, out ci);
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| 226 | instr.value = ci;
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| 227 | }
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| 228 | } else if (instr.opCode == OpCodes.HyperbolicSineIntegral) {
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| 229 | double shi, chi;
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| 230 | var x = code[instr.childIndex].value;
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| 231 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 232 | else {
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| 233 | alglib.hyperbolicsinecosineintegrals(x, out shi, out chi);
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| 234 | instr.value = shi;
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| 235 | }
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| 236 | } else if (instr.opCode == OpCodes.HyperbolicCosineIntegral) {
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| 237 | double shi, chi;
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| 238 | var x = code[instr.childIndex].value;
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| 239 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 240 | else {
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| 241 | alglib.hyperbolicsinecosineintegrals(x, out shi, out chi);
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| 242 | instr.value = chi;
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| 243 | }
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| 244 | } else if (instr.opCode == OpCodes.FresnelCosineIntegral) {
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| 245 | double c = 0, s = 0;
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| 246 | var x = code[instr.childIndex].value;
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| 247 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 248 | else {
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| 249 | alglib.fresnelintegral(x, ref c, ref s);
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| 250 | instr.value = c;
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| 251 | }
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| 252 | } else if (instr.opCode == OpCodes.FresnelSineIntegral) {
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| 253 | double c = 0, s = 0;
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| 254 | var x = code[instr.childIndex].value;
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| 255 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 256 | else {
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| 257 | alglib.fresnelintegral(x, ref c, ref s);
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| 258 | instr.value = s;
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| 259 | }
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| 260 | } else if (instr.opCode == OpCodes.AiryA) {
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| 261 | double ai, aip, bi, bip;
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| 262 | var x = code[instr.childIndex].value;
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| 263 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 264 | else {
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| 265 | alglib.airy(x, out ai, out aip, out bi, out bip);
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| 266 | instr.value = ai;
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| 267 | }
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| 268 | } else if (instr.opCode == OpCodes.AiryB) {
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| 269 | double ai, aip, bi, bip;
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| 270 | var x = code[instr.childIndex].value;
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| 271 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 272 | else {
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| 273 | alglib.airy(x, out ai, out aip, out bi, out bip);
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| 274 | instr.value = bi;
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| 275 | }
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| 276 | } else if (instr.opCode == OpCodes.Norm) {
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| 277 | var x = code[instr.childIndex].value;
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| 278 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 279 | else instr.value = alglib.normaldistribution(x);
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| 280 | } else if (instr.opCode == OpCodes.Erf) {
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| 281 | var x = code[instr.childIndex].value;
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| 282 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 283 | else instr.value = alglib.errorfunction(x);
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| 284 | } else if (instr.opCode == OpCodes.Bessel) {
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| 285 | var x = code[instr.childIndex].value;
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| 286 | if (double.IsNaN(x)) instr.value = double.NaN;
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| 287 | else instr.value = alglib.besseli0(x);
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| 288 | } else if (instr.opCode == OpCodes.IfThenElse) {
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| 289 | double condition = code[instr.childIndex].value;
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| 290 | double result;
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| 291 | if (condition > 0.0) {
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| 292 | result = code[instr.childIndex + 1].value;
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| 293 | } else {
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| 294 | result = code[instr.childIndex + 2].value;
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| 295 | }
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| 296 | instr.value = result;
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| 297 | } else if (instr.opCode == OpCodes.AND) {
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| 298 | double result = code[instr.childIndex].value;
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| 299 | for (int j = 1; j < instr.nArguments; j++) {
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| 300 | if (result > 0.0) result = code[instr.childIndex + j].value;
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| 301 | else break;
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| 302 | }
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| 303 | instr.value = result > 0.0 ? 1.0 : -1.0;
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| 304 | } else if (instr.opCode == OpCodes.OR) {
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| 305 | double result = code[instr.childIndex].value;
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| 306 | for (int j = 1; j < instr.nArguments; j++) {
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| 307 | if (result <= 0.0) result = code[instr.childIndex + j].value;
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| 308 | else break;
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| 309 | }
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| 310 | instr.value = result > 0.0 ? 1.0 : -1.0;
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| 311 | } else if (instr.opCode == OpCodes.NOT) {
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| 312 | instr.value = code[instr.childIndex].value > 0.0 ? -1.0 : 1.0;
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[10774] | 313 | } else if (instr.opCode == OpCodes.XOR) {
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[10788] | 314 | int positiveSignals = 0;
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| 315 | for (int j = 0; j < instr.nArguments; j++) {
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| 316 | if (code[instr.childIndex + j].value > 0.0) positiveSignals++;
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[10774] | 317 | }
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[10788] | 318 | instr.value = positiveSignals % 2 != 0 ? 1.0 : -1.0;
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[9871] | 319 | } else if (instr.opCode == OpCodes.GT) {
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| 320 | double x = code[instr.childIndex].value;
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| 321 | double y = code[instr.childIndex + 1].value;
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| 322 | instr.value = x > y ? 1.0 : -1.0;
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| 323 | } else if (instr.opCode == OpCodes.LT) {
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| 324 | double x = code[instr.childIndex].value;
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| 325 | double y = code[instr.childIndex + 1].value;
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| 326 | instr.value = x < y ? 1.0 : -1.0;
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| 327 | } else if (instr.opCode == OpCodes.TimeLag || instr.opCode == OpCodes.Derivative || instr.opCode == OpCodes.Integral) {
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| 328 | var state = (InterpreterState)instr.data;
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| 329 | state.Reset();
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| 330 | instr.value = interpreter.Evaluate(dataset, ref row, state);
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| 331 | } else {
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| 332 | var errorText = string.Format("The {0} symbol is not supported by the linear interpreter. To support this symbol, please use the SymbolicDataAnalysisExpressionTreeInterpreter.", instr.dynamicNode.Symbol.Name);
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| 333 | throw new NotSupportedException(errorText);
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[9271] | 334 | }
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[9739] | 335 | #endregion
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[5571] | 336 | }
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[9739] | 337 | return code[0].value;
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[5571] | 338 | }
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[9815] | 339 |
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| 340 | private static LinearInstruction[] GetPrefixSequence(LinearInstruction[] code, int startIndex) {
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[9944] | 341 | var s = new Stack<int>();
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[9815] | 342 | var list = new List<LinearInstruction>();
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[9944] | 343 | s.Push(startIndex);
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| 344 | while (s.Any()) {
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| 345 | int i = s.Pop();
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[9815] | 346 | var instr = code[i];
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[9944] | 347 | // push instructions in reverse execution order
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| 348 | for (int j = instr.nArguments - 1; j >= 0; j--) s.Push(instr.childIndex + j);
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[9815] | 349 | list.Add(instr);
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| 350 | }
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| 351 | return list.ToArray();
|
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| 352 | }
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| 353 |
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[11915] | 354 | public static void PrepareInstructions(LinearInstruction[] code, Dataset dataset) {
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[9815] | 355 | for (int i = 0; i != code.Length; ++i) {
|
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| 356 | var instr = code[i];
|
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| 357 | #region opcode switch
|
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| 358 | switch (instr.opCode) {
|
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| 359 | case OpCodes.Constant: {
|
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| 360 | var constTreeNode = (ConstantTreeNode)instr.dynamicNode;
|
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| 361 | instr.value = constTreeNode.Value;
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| 362 | instr.skip = true; // the value is already set so this instruction should be skipped in the evaluation phase
|
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| 363 | }
|
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| 364 | break;
|
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| 365 | case OpCodes.Variable: {
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| 366 | var variableTreeNode = (VariableTreeNode)instr.dynamicNode;
|
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[9826] | 367 | instr.data = dataset.GetReadOnlyDoubleValues(variableTreeNode.VariableName);
|
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[9815] | 368 | }
|
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| 369 | break;
|
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| 370 | case OpCodes.LagVariable: {
|
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| 371 | var laggedVariableTreeNode = (LaggedVariableTreeNode)instr.dynamicNode;
|
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[9826] | 372 | instr.data = dataset.GetReadOnlyDoubleValues(laggedVariableTreeNode.VariableName);
|
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[9815] | 373 | }
|
---|
| 374 | break;
|
---|
| 375 | case OpCodes.VariableCondition: {
|
---|
| 376 | var variableConditionTreeNode = (VariableConditionTreeNode)instr.dynamicNode;
|
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[9826] | 377 | instr.data = dataset.GetReadOnlyDoubleValues(variableConditionTreeNode.VariableName);
|
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[9815] | 378 | }
|
---|
| 379 | break;
|
---|
| 380 | case OpCodes.TimeLag:
|
---|
| 381 | case OpCodes.Integral:
|
---|
| 382 | case OpCodes.Derivative: {
|
---|
| 383 | var seq = GetPrefixSequence(code, i);
|
---|
| 384 | var interpreterState = new InterpreterState(seq, 0);
|
---|
[9826] | 385 | instr.data = interpreterState;
|
---|
[9815] | 386 | for (int j = 1; j != seq.Length; ++j)
|
---|
| 387 | seq[j].skip = true;
|
---|
| 388 | }
|
---|
| 389 | break;
|
---|
| 390 | }
|
---|
| 391 | #endregion
|
---|
| 392 | }
|
---|
| 393 | }
|
---|
[5571] | 394 | }
|
---|
| 395 | }
|
---|