1 | #region License Information
|
---|
2 | /* HeuristicLab
|
---|
3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
4 | *
|
---|
5 | * This file is part of HeuristicLab.
|
---|
6 | *
|
---|
7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
8 | * it under the terms of the GNU General Public License as published by
|
---|
9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
10 | * (at your option) any later version.
|
---|
11 | *
|
---|
12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
15 | * GNU General Public License for more details.
|
---|
16 | *
|
---|
17 | * You should have received a copy of the GNU General Public License
|
---|
18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
19 | */
|
---|
20 | #endregion
|
---|
21 |
|
---|
22 | using System;
|
---|
23 | using System.Linq;
|
---|
24 | using HeuristicLab.Collections;
|
---|
25 | using HeuristicLab.Common;
|
---|
26 | using HeuristicLab.Core;
|
---|
27 | using HeuristicLab.Data;
|
---|
28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
|
---|
29 | using HeuristicLab.Operators;
|
---|
30 | using HeuristicLab.Optimization;
|
---|
31 | using HeuristicLab.Parameters;
|
---|
32 | using HeuristicLab.Persistence;
|
---|
33 | using HeuristicLab.PluginInfrastructure;
|
---|
34 |
|
---|
35 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
|
---|
36 | [Item("MultiSymbolicDataAnalysisExpressionCrossover", "Randomly selects and applies one of its crossovers every time it is called.")]
|
---|
37 | [StorableType("09935e2c-7451-4061-81a3-946a76301fab")]
|
---|
38 | public class MultiSymbolicDataAnalysisExpressionCrossover<T> : StochasticMultiBranch<ISymbolicExpressionTreeCrossover>,
|
---|
39 | ISymbolicDataAnalysisExpressionCrossover<T> where T : class, IDataAnalysisProblemData {
|
---|
40 | private const string ParentsParameterName = "Parents";
|
---|
41 | private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
|
---|
42 | private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
|
---|
43 | private const string MaximumSymbolicExpressionTreeDepthParameterName = "MaximumSymbolicExpressionTreeDepth";
|
---|
44 | private const string SymbolicDataAnalysisTreeInterpreterParameterName = "SymbolicExpressionTreeInterpreter";
|
---|
45 | private const string EvaluatorParameterName = "Evaluator";
|
---|
46 | private const string SymbolicDataAnalysisEvaluationPartitionParameterName = "EvaluationPartition";
|
---|
47 | private const string RelativeNumberOfEvaluatedSamplesParameterName = "RelativeNumberOfEvaluatedSamples";
|
---|
48 | private const string ProblemDataParameterName = "ProblemData";
|
---|
49 |
|
---|
50 | protected override bool CreateChildOperation {
|
---|
51 | get { return true; }
|
---|
52 | }
|
---|
53 |
|
---|
54 | public override bool CanChangeName {
|
---|
55 | get { return false; }
|
---|
56 | }
|
---|
57 |
|
---|
58 | #region parameter properties
|
---|
59 | public ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter> SymbolicDataAnalysisTreeInterpreterParameter {
|
---|
60 | get { return (ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>)Parameters[SymbolicDataAnalysisTreeInterpreterParameterName]; }
|
---|
61 | }
|
---|
62 | public ILookupParameter<ItemArray<ISymbolicExpressionTree>> ParentsParameter {
|
---|
63 | get { return (ScopeTreeLookupParameter<ISymbolicExpressionTree>)Parameters[ParentsParameterName]; }
|
---|
64 | }
|
---|
65 | public ILookupParameter<ISymbolicExpressionTree> SymbolicExpressionTreeParameter {
|
---|
66 | get { return (ILookupParameter<ISymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
|
---|
67 | }
|
---|
68 | public IValueLookupParameter<IntValue> MaximumSymbolicExpressionTreeLengthParameter {
|
---|
69 | get { return (IValueLookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]; }
|
---|
70 | }
|
---|
71 | public IValueLookupParameter<IntValue> MaximumSymbolicExpressionTreeDepthParameter {
|
---|
72 | get { return (IValueLookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeDepthParameterName]; }
|
---|
73 | }
|
---|
74 | public ILookupParameter<ISymbolicDataAnalysisSingleObjectiveEvaluator<T>> EvaluatorParameter {
|
---|
75 | get { return (ILookupParameter<ISymbolicDataAnalysisSingleObjectiveEvaluator<T>>)Parameters[EvaluatorParameterName]; }
|
---|
76 | }
|
---|
77 | public IValueLookupParameter<IntRange> EvaluationPartitionParameter {
|
---|
78 | get { return (IValueLookupParameter<IntRange>)Parameters[SymbolicDataAnalysisEvaluationPartitionParameterName]; }
|
---|
79 | }
|
---|
80 | public IValueLookupParameter<PercentValue> RelativeNumberOfEvaluatedSamplesParameter {
|
---|
81 | get { return (IValueLookupParameter<PercentValue>)Parameters[RelativeNumberOfEvaluatedSamplesParameterName]; }
|
---|
82 | }
|
---|
83 | public IValueLookupParameter<T> ProblemDataParameter {
|
---|
84 | get { return (IValueLookupParameter<T>)Parameters[ProblemDataParameterName]; }
|
---|
85 | }
|
---|
86 | #endregion
|
---|
87 |
|
---|
88 | [StorableConstructor]
|
---|
89 | protected MultiSymbolicDataAnalysisExpressionCrossover(StorableConstructorFlag deserializing) : base(deserializing) { }
|
---|
90 | protected MultiSymbolicDataAnalysisExpressionCrossover(MultiSymbolicDataAnalysisExpressionCrossover<T> original, Cloner cloner) : base(original, cloner) { }
|
---|
91 | public override IDeepCloneable Clone(Cloner cloner) { return new MultiSymbolicDataAnalysisExpressionCrossover<T>(this, cloner); }
|
---|
92 | public MultiSymbolicDataAnalysisExpressionCrossover()
|
---|
93 | : base() {
|
---|
94 | Parameters.Add(new ValueLookupParameter<PercentValue>(RelativeNumberOfEvaluatedSamplesParameterName, "The relative number of samples of the dataset partition, which should be randomly chosen for evaluation between the start and end index."));
|
---|
95 | Parameters.Add(new ValueLookupParameter<T>(ProblemDataParameterName, "The problem data on which the symbolic data analysis solution should be evaluated."));
|
---|
96 | Parameters.Add(new LookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>(SymbolicDataAnalysisTreeInterpreterParameterName, "The interpreter that should be used to calculate the output values of the symbolic data analysis tree."));
|
---|
97 | Parameters.Add(new ValueLookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "The maximal length (number of nodes) of the symbolic expression tree."));
|
---|
98 | Parameters.Add(new ValueLookupParameter<IntValue>(MaximumSymbolicExpressionTreeDepthParameterName, "The maximal depth of the symbolic expression tree (a tree with one node has depth = 0)."));
|
---|
99 | Parameters.Add(new LookupParameter<ISymbolicDataAnalysisSingleObjectiveEvaluator<T>>(EvaluatorParameterName, "The single objective solution evaluator"));
|
---|
100 | Parameters.Add(new ValueLookupParameter<IntRange>(SymbolicDataAnalysisEvaluationPartitionParameterName, "The start index of the dataset partition on which the symbolic data analysis solution should be evaluated."));
|
---|
101 | Parameters.Add(new ScopeTreeLookupParameter<ISymbolicExpressionTree>(ParentsParameterName, "The parent symbolic expression trees which should be crossed."));
|
---|
102 | Parameters.Add(new LookupParameter<ISymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The child symbolic expression tree resulting from the crossover."));
|
---|
103 |
|
---|
104 | EvaluatorParameter.Hidden = true;
|
---|
105 | EvaluationPartitionParameter.Hidden = true;
|
---|
106 | SymbolicDataAnalysisTreeInterpreterParameter.Hidden = true;
|
---|
107 | ProblemDataParameter.Hidden = true;
|
---|
108 | RelativeNumberOfEvaluatedSamplesParameter.Hidden = true;
|
---|
109 |
|
---|
110 | InitializeOperators();
|
---|
111 | name = "MultiSymbolicDataAnalysisExpressionCrossover";
|
---|
112 |
|
---|
113 | SelectedOperatorParameter.ActualName = "SelectedCrossoverOperator";
|
---|
114 | }
|
---|
115 |
|
---|
116 | [StorableHook(HookType.AfterDeserialization)]
|
---|
117 | private void AfterDeserialization() {
|
---|
118 | // BackwardsCompatibility3.3
|
---|
119 | #region Backwards compatible code, remove with 3.4
|
---|
120 | if (!Parameters.ContainsKey(SymbolicExpressionTreeParameterName))
|
---|
121 | Parameters.Add(new LookupParameter<ISymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The symbolic expression tree on which the operator should be applied."));
|
---|
122 | #endregion
|
---|
123 | }
|
---|
124 |
|
---|
125 | private void InitializeOperators() {
|
---|
126 | var list = ApplicationManager.Manager.GetInstances<ISymbolicExpressionTreeCrossover>().ToList();
|
---|
127 | var dataAnalysisCrossovers = from type in ApplicationManager.Manager.GetTypes(typeof(ISymbolicDataAnalysisExpressionCrossover<T>))
|
---|
128 | where this.GetType().Assembly == type.Assembly
|
---|
129 | where !typeof(IMultiOperator<ISymbolicExpressionTreeCrossover>).IsAssignableFrom(type)
|
---|
130 | select (ISymbolicDataAnalysisExpressionCrossover<T>)Activator.CreateInstance(type);
|
---|
131 | list.AddRange(dataAnalysisCrossovers);
|
---|
132 |
|
---|
133 | var checkedItemList = new CheckedItemList<ISymbolicExpressionTreeCrossover>();
|
---|
134 | checkedItemList.AddRange(list.OrderBy(op => op.Name));
|
---|
135 | Operators = checkedItemList;
|
---|
136 | Operators_ItemsAdded(this, new CollectionItemsChangedEventArgs<IndexedItem<ISymbolicExpressionTreeCrossover>>(Operators.CheckedItems));
|
---|
137 | }
|
---|
138 |
|
---|
139 | public ISymbolicExpressionTree Crossover(IRandom random, ISymbolicExpressionTree parent0, ISymbolicExpressionTree parent1) {
|
---|
140 | double sum = Operators.CheckedItems.Sum(o => Probabilities[o.Index]);
|
---|
141 | if (sum.IsAlmost(0)) throw new InvalidOperationException(Name + ": All selected operators have zero probability.");
|
---|
142 | double r = random.NextDouble() * sum;
|
---|
143 | sum = 0;
|
---|
144 | int index = -1;
|
---|
145 | foreach (var indexedItem in Operators.CheckedItems) {
|
---|
146 | sum += Probabilities[indexedItem.Index];
|
---|
147 | if (sum > r) {
|
---|
148 | index = indexedItem.Index;
|
---|
149 | break;
|
---|
150 | }
|
---|
151 | }
|
---|
152 | return Operators[index].Crossover(random, parent0, parent1);
|
---|
153 | }
|
---|
154 |
|
---|
155 | protected override void Operators_ItemsReplaced(object sender, CollectionItemsChangedEventArgs<IndexedItem<ISymbolicExpressionTreeCrossover>> e) {
|
---|
156 | base.Operators_ItemsReplaced(sender, e);
|
---|
157 | ParameterizeCrossovers();
|
---|
158 | }
|
---|
159 |
|
---|
160 | protected override void Operators_ItemsAdded(object sender, CollectionItemsChangedEventArgs<IndexedItem<ISymbolicExpressionTreeCrossover>> e) {
|
---|
161 | base.Operators_ItemsAdded(sender, e);
|
---|
162 | ParameterizeCrossovers();
|
---|
163 | }
|
---|
164 |
|
---|
165 | private void ParameterizeCrossovers() {
|
---|
166 | foreach (ISymbolicExpressionTreeCrossover op in Operators) {
|
---|
167 | op.SymbolicExpressionTreeParameter.ActualName = SymbolicExpressionTreeParameter.Name;
|
---|
168 | op.ParentsParameter.ActualName = ParentsParameter.Name;
|
---|
169 | }
|
---|
170 | foreach (IStochasticOperator op in Operators.OfType<IStochasticOperator>()) {
|
---|
171 | op.RandomParameter.ActualName = RandomParameter.Name;
|
---|
172 | }
|
---|
173 | foreach (ISymbolicExpressionTreeSizeConstraintOperator op in Operators.OfType<ISymbolicExpressionTreeSizeConstraintOperator>()) {
|
---|
174 | op.MaximumSymbolicExpressionTreeDepthParameter.ActualName = MaximumSymbolicExpressionTreeDepthParameter.Name;
|
---|
175 | op.MaximumSymbolicExpressionTreeLengthParameter.ActualName = MaximumSymbolicExpressionTreeLengthParameter.Name;
|
---|
176 | }
|
---|
177 |
|
---|
178 | foreach (ISymbolicDataAnalysisInterpreterOperator op in Operators.OfType<ISymbolicDataAnalysisInterpreterOperator>()) {
|
---|
179 | op.SymbolicDataAnalysisTreeInterpreterParameter.ActualName = SymbolicDataAnalysisTreeInterpreterParameter.Name;
|
---|
180 | }
|
---|
181 | foreach (var op in Operators.OfType<ISymbolicDataAnalysisExpressionCrossover<T>>()) {
|
---|
182 | op.ProblemDataParameter.ActualName = ProblemDataParameter.Name;
|
---|
183 | op.EvaluationPartitionParameter.ActualName = EvaluationPartitionParameter.Name;
|
---|
184 | op.RelativeNumberOfEvaluatedSamplesParameter.ActualName = RelativeNumberOfEvaluatedSamplesParameter.Name;
|
---|
185 | op.EvaluatorParameter.ActualName = EvaluatorParameter.Name;
|
---|
186 | }
|
---|
187 | }
|
---|
188 | }
|
---|
189 | }
|
---|