1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using HeuristicLab.Common;
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26 | using HeuristicLab.Core;
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27 | using HeuristicLab.Data;
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28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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29 | using HeuristicLab.Optimization;
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30 | using HeuristicLab.Parameters;
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31 | using HeuristicLab.Persistence;
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32 |
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33 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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34 | /// <summary>
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35 | /// An operator that analyzes the validation best symbolic data analysis solution for multi objective symbolic data analysis problems.
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36 | /// </summary>
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37 | [Item("SymbolicDataAnalysisMultiObjectiveValidationBestSolutionAnalyzer", "An operator that analyzes the validation best symbolic data analysis solution for multi objective symbolic data analysis problems.")]
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38 | [StorableType("796b0d95-840a-43d3-a2c5-5d03b339d4d2")]
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39 | public abstract class SymbolicDataAnalysisMultiObjectiveValidationBestSolutionAnalyzer<S, T, U> : SymbolicDataAnalysisMultiObjectiveValidationAnalyzer<T, U>,
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40 | ISymbolicDataAnalysisMultiObjectiveAnalyzer
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41 | where S : class, ISymbolicDataAnalysisSolution
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42 | where T : class, ISymbolicDataAnalysisMultiObjectiveEvaluator<U>
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43 | where U : class, IDataAnalysisProblemData {
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44 | private const string ValidationBestSolutionsParameterName = "Best validation solutions";
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45 | private const string ValidationBestSolutionQualitiesParameterName = "Best validation solution qualities";
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46 | private const string UpdateAlwaysParameterName = "Always update best solutions";
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47 |
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48 | #region parameter properties
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49 | public ILookupParameter<ItemList<S>> ValidationBestSolutionsParameter {
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50 | get { return (ILookupParameter<ItemList<S>>)Parameters[ValidationBestSolutionsParameterName]; }
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51 | }
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52 | public ILookupParameter<ItemList<DoubleArray>> ValidationBestSolutionQualitiesParameter {
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53 | get { return (ILookupParameter<ItemList<DoubleArray>>)Parameters[ValidationBestSolutionQualitiesParameterName]; }
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54 | }
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55 | public IFixedValueParameter<BoolValue> UpdateAlwaysParameter {
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56 | get { return (IFixedValueParameter<BoolValue>)Parameters[UpdateAlwaysParameterName]; }
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57 | }
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58 | #endregion
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59 | #region properties
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60 | public ItemList<S> ValidationBestSolutions {
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61 | get { return ValidationBestSolutionsParameter.ActualValue; }
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62 | set { ValidationBestSolutionsParameter.ActualValue = value; }
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63 | }
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64 | public ItemList<DoubleArray> ValidationBestSolutionQualities {
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65 | get { return ValidationBestSolutionQualitiesParameter.ActualValue; }
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66 | set { ValidationBestSolutionQualitiesParameter.ActualValue = value; }
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67 | }
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68 | public BoolValue UpdateAlways {
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69 | get { return UpdateAlwaysParameter.Value; }
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70 | }
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71 | #endregion
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72 |
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73 | [StorableConstructor]
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74 | protected SymbolicDataAnalysisMultiObjectiveValidationBestSolutionAnalyzer(StorableConstructorFlag deserializing) : base(deserializing) { }
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75 | protected SymbolicDataAnalysisMultiObjectiveValidationBestSolutionAnalyzer(SymbolicDataAnalysisMultiObjectiveValidationBestSolutionAnalyzer<S, T, U> original, Cloner cloner) : base(original, cloner) { }
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76 | public SymbolicDataAnalysisMultiObjectiveValidationBestSolutionAnalyzer()
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77 | : base() {
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78 | Parameters.Add(new LookupParameter<ItemList<S>>(ValidationBestSolutionsParameterName, "The validation best (Pareto-optimal) symbolic data analysis solutions."));
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79 | Parameters.Add(new LookupParameter<ItemList<DoubleArray>>(ValidationBestSolutionQualitiesParameterName, "The qualities of the validation best (Pareto-optimal) solutions."));
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80 | Parameters.Add(new FixedValueParameter<BoolValue>(UpdateAlwaysParameterName, "Determines if the best validation solutions should always be updated regardless of its quality.", new BoolValue(false)));
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81 | UpdateAlwaysParameter.Hidden = true;
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82 | }
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83 |
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84 | [StorableHook(HookType.AfterDeserialization)]
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85 | private void AfterDeserialization() {
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86 | if (!Parameters.ContainsKey(UpdateAlwaysParameterName)) {
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87 | Parameters.Add(new FixedValueParameter<BoolValue>(UpdateAlwaysParameterName, "Determines if the best training solutions should always be updated regardless of its quality.", new BoolValue(false)));
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88 | UpdateAlwaysParameter.Hidden = true;
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89 | }
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90 | }
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91 |
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92 | public override IOperation Apply() {
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93 | IEnumerable<int> rows = GenerateRowsToEvaluate();
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94 | if (!rows.Any()) return base.Apply();
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95 |
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96 | var results = ResultCollection;
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97 | // create empty parameter and result values
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98 | if (ValidationBestSolutions == null) {
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99 | ValidationBestSolutions = new ItemList<S>();
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100 | ValidationBestSolutionQualities = new ItemList<DoubleArray>();
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101 | results.Add(new Result(ValidationBestSolutionQualitiesParameter.Name, ValidationBestSolutionQualitiesParameter.Description, ValidationBestSolutionQualities));
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102 | results.Add(new Result(ValidationBestSolutionsParameter.Name, ValidationBestSolutionsParameter.Description, ValidationBestSolutions));
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103 | }
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104 |
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105 | //if the pareto front of best solutions shall be updated regardless of the quality, the list initialized empty to discard old solutions
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106 | IList<double[]> trainingBestQualities;
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107 | if (UpdateAlways.Value) {
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108 | trainingBestQualities = new List<double[]>();
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109 | } else {
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110 | trainingBestQualities = ValidationBestSolutionQualities.Select(x => x.ToArray()).ToList();
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111 | }
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112 |
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113 | #region find best trees
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114 | IList<int> nonDominatedIndexes = new List<int>();
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115 | ISymbolicExpressionTree[] tree = SymbolicExpressionTree.ToArray();
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116 | bool[] maximization = Maximization.ToArray();
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117 | List<double[]> newNonDominatedQualities = new List<double[]>();
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118 | var evaluator = EvaluatorParameter.ActualValue;
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119 | var problemData = ProblemDataParameter.ActualValue;
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120 | IExecutionContext childContext = (IExecutionContext)ExecutionContext.CreateChildOperation(evaluator);
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121 |
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122 | var qualities = tree
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123 | .Select(t => evaluator.Evaluate(childContext, t, problemData, rows))
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124 | .ToArray();
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125 | for (int i = 0; i < tree.Length; i++) {
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126 | if (IsNonDominated(qualities[i], trainingBestQualities, maximization) &&
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127 | IsNonDominated(qualities[i], qualities, maximization)) {
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128 | if (!newNonDominatedQualities.Contains(qualities[i], new DoubleArrayComparer())) {
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129 | newNonDominatedQualities.Add(qualities[i]);
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130 | nonDominatedIndexes.Add(i);
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131 | }
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132 | }
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133 | }
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134 | #endregion
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135 | #region update Pareto-optimal solution archive
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136 | if (nonDominatedIndexes.Count > 0) {
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137 | ItemList<DoubleArray> nonDominatedQualities = new ItemList<DoubleArray>();
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138 | ItemList<S> nonDominatedSolutions = new ItemList<S>();
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139 | // add all new non-dominated solutions to the archive
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140 | foreach (var index in nonDominatedIndexes) {
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141 | S solution = CreateSolution(tree[index], qualities[index]);
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142 | nonDominatedSolutions.Add(solution);
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143 | nonDominatedQualities.Add(new DoubleArray(qualities[index]));
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144 | }
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145 | // add old non-dominated solutions only if they are not dominated by one of the new solutions
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146 | for (int i = 0; i < trainingBestQualities.Count; i++) {
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147 | if (IsNonDominated(trainingBestQualities[i], newNonDominatedQualities, maximization)) {
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148 | if (!newNonDominatedQualities.Contains(trainingBestQualities[i], new DoubleArrayComparer())) {
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149 | nonDominatedSolutions.Add(ValidationBestSolutions[i]);
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150 | nonDominatedQualities.Add(ValidationBestSolutionQualities[i]);
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151 | }
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152 | }
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153 | }
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154 |
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155 | results[ValidationBestSolutionsParameter.Name].Value = nonDominatedSolutions;
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156 | results[ValidationBestSolutionQualitiesParameter.Name].Value = nonDominatedQualities;
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157 | }
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158 | #endregion
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159 | return base.Apply();
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160 | }
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161 |
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162 | protected abstract S CreateSolution(ISymbolicExpressionTree bestTree, double[] bestQuality);
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163 |
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164 | private bool IsNonDominated(double[] point, IList<double[]> points, bool[] maximization) {
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165 | foreach (var refPoint in points) {
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166 | bool refPointDominatesPoint = true;
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167 | for (int i = 0; i < point.Length; i++) {
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168 | refPointDominatesPoint &= IsBetter(refPoint[i], point[i], maximization[i]);
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169 | }
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170 | if (refPointDominatesPoint) return false;
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171 | }
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172 | return true;
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173 | }
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174 | private bool IsBetter(double lhs, double rhs, bool maximization) {
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175 | if (maximization) return lhs > rhs;
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176 | else return lhs < rhs;
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177 | }
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178 |
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179 | private class DoubleArrayComparer : IEqualityComparer<double[]> {
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180 | public bool Equals(double[] x, double[] y) {
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181 | if (y.Length != x.Length) throw new ArgumentException();
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182 | for (int i = 0; i < x.Length; i++) {
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183 | if (!x[i].IsAlmost(y[i])) return false;
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184 | }
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185 | return true;
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186 | }
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187 |
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188 | public int GetHashCode(double[] obj) {
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189 | int c = obj.Length;
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190 | for (int i = 0; i < obj.Length; i++)
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191 | c ^= obj[i].GetHashCode();
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192 | return c;
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193 | }
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194 | }
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195 |
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196 | }
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197 | }
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