1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2015 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 | using System.Linq;
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22 | using HeuristicLab.Common;
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23 | using HeuristicLab.Core;
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24 | using HeuristicLab.Data;
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25 | using HeuristicLab.Optimization;
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26 | using HeuristicLab.Parameters;
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27 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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28 |
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29 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic.Classification {
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30 | [Item("Symbolic Classification Problem (multi-objective)", "Represents a multi objective symbolic classfication problem.")]
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31 | [StorableClass("FB1DE179-6E65-4330-A539-88C98AD87EDD")]
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32 | [Creatable(CreatableAttribute.Categories.GeneticProgrammingProblems, Priority = 130)]
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33 | public class SymbolicClassificationMultiObjectiveProblem : SymbolicDataAnalysisMultiObjectiveProblem<IClassificationProblemData, ISymbolicClassificationMultiObjectiveEvaluator, ISymbolicDataAnalysisSolutionCreator>, IClassificationProblem {
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34 | private const double PunishmentFactor = 10;
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35 | private const int InitialMaximumTreeDepth = 8;
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36 | private const int InitialMaximumTreeLength = 25;
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37 | private const string EstimationLimitsParameterName = "EstimationLimits";
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38 | private const string EstimationLimitsParameterDescription = "The lower and upper limit for the estimated value that can be returned by the symbolic classification model.";
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39 | private const string ModelCreatorParameterName = "ModelCreator";
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40 |
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41 |
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42 | #region parameter properties
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43 | public IFixedValueParameter<DoubleLimit> EstimationLimitsParameter {
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44 | get { return (IFixedValueParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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45 | }
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46 | public IValueParameter<ISymbolicClassificationModelCreator> ModelCreatorParameter {
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47 | get { return (IValueParameter<ISymbolicClassificationModelCreator>)Parameters[ModelCreatorParameterName]; }
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48 | }
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49 | #endregion
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50 | #region properties
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51 | public DoubleLimit EstimationLimits {
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52 | get { return EstimationLimitsParameter.Value; }
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53 | }
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54 | public ISymbolicClassificationModelCreator ModelCreator {
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55 | get { return ModelCreatorParameter.Value; }
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56 | }
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57 | #endregion
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58 | [StorableConstructor]
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59 | protected SymbolicClassificationMultiObjectiveProblem(bool deserializing) : base(deserializing) { }
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60 | protected SymbolicClassificationMultiObjectiveProblem(SymbolicClassificationMultiObjectiveProblem original, Cloner cloner)
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61 | : base(original, cloner) {
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62 | RegisterEventHandlers();
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63 | }
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64 | public override IDeepCloneable Clone(Cloner cloner) { return new SymbolicClassificationMultiObjectiveProblem(this, cloner); }
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65 |
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66 | public SymbolicClassificationMultiObjectiveProblem()
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67 | : base(new ClassificationProblemData(), new SymbolicClassificationMultiObjectiveMeanSquaredErrorTreeSizeEvaluator(), new SymbolicDataAnalysisExpressionTreeCreator()) {
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68 | Parameters.Add(new FixedValueParameter<DoubleLimit>(EstimationLimitsParameterName, EstimationLimitsParameterDescription));
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69 | Parameters.Add(new ValueParameter<ISymbolicClassificationModelCreator>(ModelCreatorParameterName, "", new AccuracyMaximizingThresholdsModelCreator()));
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70 |
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71 | ApplyLinearScalingParameter.Value.Value = false;
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72 | EstimationLimitsParameter.Hidden = true;
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73 |
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74 | Maximization = new BoolArray(new bool[] { false, false });
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75 | MaximumSymbolicExpressionTreeDepth.Value = InitialMaximumTreeDepth;
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76 | MaximumSymbolicExpressionTreeLength.Value = InitialMaximumTreeLength;
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77 |
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78 |
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79 | RegisterEventHandlers();
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80 | ConfigureGrammarSymbols();
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81 | InitializeOperators();
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82 | UpdateEstimationLimits();
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83 | }
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84 |
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85 | [StorableHook(HookType.AfterDeserialization)]
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86 | private void AfterDeserialization() {
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87 | // BackwardsCompatibility3.4
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88 | #region Backwards compatible code, remove with 3.5
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89 | if (!Parameters.ContainsKey(ModelCreatorParameterName))
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90 | Parameters.Add(new ValueParameter<ISymbolicClassificationModelCreator>(ModelCreatorParameterName, "", new AccuracyMaximizingThresholdsModelCreator()));
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91 | #endregion
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92 | RegisterEventHandlers();
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93 | }
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94 |
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95 | private void RegisterEventHandlers() {
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96 | SymbolicExpressionTreeGrammarParameter.ValueChanged += (o, e) => ConfigureGrammarSymbols();
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97 | ModelCreatorParameter.NameChanged += (o, e) => ParameterizeOperators();
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98 | }
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99 |
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100 | private void ConfigureGrammarSymbols() {
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101 | var grammar = SymbolicExpressionTreeGrammar as TypeCoherentExpressionGrammar;
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102 | if (grammar != null) grammar.ConfigureAsDefaultClassificationGrammar();
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103 | }
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104 |
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105 | private void InitializeOperators() {
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106 | Operators.Add(new SymbolicClassificationMultiObjectiveTrainingBestSolutionAnalyzer());
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107 | Operators.Add(new SymbolicClassificationMultiObjectiveValidationBestSolutionAnalyzer());
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108 | Operators.Add(new SymbolicExpressionTreePhenotypicSimilarityCalculator());
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109 | Operators.Add(new SymbolicClassificationPhenotypicDiversityAnalyzer(Operators.OfType<SymbolicExpressionTreePhenotypicSimilarityCalculator>()));
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110 | ParameterizeOperators();
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111 | }
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112 |
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113 | private void UpdateEstimationLimits() {
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114 | if (ProblemData.TrainingIndices.Any()) {
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115 | var targetValues = ProblemData.Dataset.GetDoubleValues(ProblemData.TargetVariable, ProblemData.TrainingIndices).ToList();
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116 | var mean = targetValues.Average();
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117 | var range = targetValues.Max() - targetValues.Min();
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118 | EstimationLimits.Upper = mean + PunishmentFactor * range;
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119 | EstimationLimits.Lower = mean - PunishmentFactor * range;
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120 | } else {
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121 | EstimationLimits.Upper = double.MaxValue;
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122 | EstimationLimits.Lower = double.MinValue;
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123 | }
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124 | }
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125 |
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126 | protected override void OnProblemDataChanged() {
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127 | base.OnProblemDataChanged();
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128 | UpdateEstimationLimits();
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129 | }
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130 |
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131 | protected override void ParameterizeOperators() {
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132 | base.ParameterizeOperators();
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133 | if (Parameters.ContainsKey(EstimationLimitsParameterName)) {
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134 | var operators = Parameters.OfType<IValueParameter>().Select(p => p.Value).OfType<IOperator>().Union(Operators);
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135 | foreach (var op in operators.OfType<ISymbolicDataAnalysisBoundedOperator>())
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136 | op.EstimationLimitsParameter.ActualName = EstimationLimitsParameter.Name;
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137 | foreach (var op in operators.OfType<ISymbolicClassificationModelCreatorOperator>())
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138 | op.ModelCreatorParameter.ActualName = ModelCreatorParameter.Name;
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139 | }
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140 |
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141 | foreach (var op in Operators.OfType<ISolutionSimilarityCalculator>()) {
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142 | op.SolutionVariableName = SolutionCreator.SymbolicExpressionTreeParameter.ActualName;
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143 | op.QualityVariableName = Evaluator.QualitiesParameter.ActualName;
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144 |
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145 | if (op is SymbolicExpressionTreePhenotypicSimilarityCalculator) {
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146 | var phenotypicSimilarityCalculator = (SymbolicExpressionTreePhenotypicSimilarityCalculator)op;
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147 | phenotypicSimilarityCalculator.ProblemData = ProblemData;
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148 | phenotypicSimilarityCalculator.Interpreter = SymbolicExpressionTreeInterpreter;
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149 | }
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150 | }
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151 | }
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152 | }
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153 | }
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