1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using HeuristicLab.Common;
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23 | using HeuristicLab.Core;
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24 | using HeuristicLab.Data;
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25 | using HeuristicLab.Operators;
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26 | using HeuristicLab.Optimization;
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27 | using HeuristicLab.Parameters;
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28 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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29 | using System.Linq;
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30 |
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31 | namespace HeuristicLab.Analysis.FitnessLandscape {
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32 | [Item("Ruggedness Analyzer", "Analyzes autocorrelation for one mutation step and correlation length.")]
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33 | [StorableClass]
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34 | public class RuggednessAnalyzer : SingleSuccessorOperator, IQualityTrailAnalyzer {
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35 | public bool EnabledByDefault {
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36 | get { return false; }
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37 | }
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38 |
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39 | #region Parameters
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40 | public LookupParameter<DataTable> QualityTrailParameter {
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41 | get { return (LookupParameter<DataTable>)Parameters["Quality Trail"]; }
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42 | }
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43 | public LookupParameter<ResultCollection> ResultsParameter {
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44 | get { return (LookupParameter<ResultCollection>)Parameters["Results"]; }
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45 | }
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46 | public LookupParameter<DoubleValue> AutoCorrelation1Parameter {
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47 | get { return (LookupParameter<DoubleValue>)Parameters["AutoCorrelation1"]; }
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48 | }
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49 | public LookupParameter<IntValue> CorrelationLengthParameter {
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50 | get { return (LookupParameter<IntValue>)Parameters["CorrelationLength"]; }
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51 | }
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52 | #endregion
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53 |
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54 | [StorableConstructor]
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55 | protected RuggednessAnalyzer(bool deserializing) : base(deserializing) { }
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56 | protected RuggednessAnalyzer(RuggednessAnalyzer original, Cloner cloner) : base(original, cloner) { }
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57 | public RuggednessAnalyzer() {
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58 | Parameters.Add(new LookupParameter<DataTable>("Quality Trail", "The quality of the solution"));
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59 | Parameters.Add(new LookupParameter<ResultCollection>("Results", "The collection of all results of this algorithm"));
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60 | Parameters.Add(new LookupParameter<DoubleValue>("AutoCorrelation1", "Autocorrelation for one mutation step."));
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61 | Parameters.Add(new LookupParameter<IntValue>("CorrelationLength", "The correlation length."));
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62 | }
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63 |
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64 | public override IDeepCloneable Clone(Cloner cloner) {
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65 | return new RuggednessAnalyzer(this, cloner);
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66 | }
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67 |
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68 | public override IOperation Apply() {
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69 | var qualityTrail = QualityTrailParameter.ActualValue;
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70 | if (qualityTrail == null || qualityTrail.Rows.Count <= 0) return base.Apply();
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71 | var results = ResultsParameter.ActualValue;
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72 | double[] autocorrelationValues;
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73 | var correlationLength = RuggednessCalculator.CalculateCorrelationLength(qualityTrail.Rows.First().Values.ToArray(), out autocorrelationValues);
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74 | var cl = new IntValue(correlationLength);
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75 | CorrelationLengthParameter.ActualValue = cl;
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76 | AddOrUpdateResult(results, CorrelationLengthParameter.Name, cl);
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77 | var ac1 = new DoubleValue(autocorrelationValues.Length > 1 ? autocorrelationValues[1] : 0.0);
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78 | AutoCorrelation1Parameter.ActualValue = ac1;
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79 | AddOrUpdateResult(results, AutoCorrelation1Parameter.Name, ac1);
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80 | return base.Apply();
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81 | }
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82 |
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83 | private static void AddOrUpdateResult(ResultCollection results, string name, IItem item, bool clone = false) {
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84 | IResult r;
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85 | if (!results.TryGetValue(name, out r)) {
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86 | results.Add(new Result(name, clone ? (IItem)item.Clone() : item));
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87 | } else r.Value = clone ? (IItem)item.Clone() : item;
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88 | }
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89 | }
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90 | }
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