1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using System.Text;
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26 | using HeuristicLab.Core;
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27 | using System.Xml;
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28 | using System.Diagnostics;
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29 | using HeuristicLab.DataAnalysis;
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30 | using HeuristicLab.Operators;
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31 | using HeuristicLab.Random;
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32 | using HeuristicLab.Selection;
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33 | using HeuristicLab.Logging;
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34 | using HeuristicLab.Data;
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35 | using HeuristicLab.Operators.Programmable;
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36 | using HeuristicLab.Selection.OffspringSelection;
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37 | using HeuristicLab.Evolutionary;
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38 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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39 |
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40 | namespace HeuristicLab.GP.StructureIdentification {
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41 |
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42 | [EmptyStorableClass]
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43 | public class OffspringSelectionGP : StandardGP {
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44 | public override string Name { get { return "OffspringSelectionGP"; } }
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45 |
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46 | public virtual int MaxEvaluatedSolutions {
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47 | get { return GetVariableInjector().GetVariable("MaxEvaluatedSolutions").GetValue<IntData>().Data; }
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48 | set { GetVariableInjector().GetVariable("MaxEvaluatedSolutions").GetValue<IntData>().Data = value; }
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49 | }
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50 |
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51 | public virtual double SelectionPressureLimit {
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52 | get { return GetVariableInjector().GetVariable("SelectionPressureLimit").GetValue<DoubleData>().Data; }
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53 | set { GetVariableInjector().GetVariable("SelectionPressureLimit").GetValue<DoubleData>().Data = value; }
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54 | }
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55 |
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56 | public virtual double ComparisonFactor {
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57 | get { return GetVariableInjector().GetVariable("ComparisonFactor").GetValue<DoubleData>().Data; }
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58 | set { GetVariableInjector().GetVariable("ComparisonFactor").GetValue<DoubleData>().Data = value; }
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59 | }
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60 |
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61 | public virtual double SuccessRatioLimit {
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62 | get { return GetVariableInjector().GetVariable("SuccessRatioLimit").GetValue<DoubleData>().Data; }
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63 | set { GetVariableInjector().GetVariable("SuccessRatioLimit").GetValue<DoubleData>().Data = value; }
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64 | }
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65 |
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66 | public override int MaxGenerations {
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67 | get { throw new NotSupportedException(); }
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68 | set { /* ignore */ }
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69 | }
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70 |
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71 | public override int TournamentSize {
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72 | get { throw new NotSupportedException(); }
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73 | set { /* ignore */ }
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74 | }
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75 |
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76 | public OffspringSelectionGP()
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77 | : base() {
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78 | PopulationSize = 1000;
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79 | Parents = 20;
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80 | MaxEvaluatedSolutions = 1000000;
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81 | SelectionPressureLimit = 300;
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82 | ComparisonFactor = 1.0;
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83 | SuccessRatioLimit = 1.0;
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84 | }
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85 |
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86 | protected internal override IOperator CreateGlobalInjector() {
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87 | VariableInjector injector = (VariableInjector)base.CreateGlobalInjector();
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88 | injector.RemoveVariable("TournamentSize");
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89 | injector.RemoveVariable("MaxGenerations");
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90 | injector.AddVariable(new HeuristicLab.Core.Variable("MaxEvaluatedSolutions", new IntData()));
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91 | injector.AddVariable(new HeuristicLab.Core.Variable("ComparisonFactor", new DoubleData()));
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92 | injector.AddVariable(new HeuristicLab.Core.Variable("SelectionPressureLimit", new DoubleData()));
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93 | injector.AddVariable(new HeuristicLab.Core.Variable("SuccessRatioLimit", new DoubleData()));
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94 | return injector;
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95 | }
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96 |
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97 | protected internal override IOperator CreateSelector() {
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98 | CombinedOperator selector = new CombinedOperator();
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99 | selector.Name = "Selector";
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100 | SequentialProcessor seq = new SequentialProcessor();
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101 | seq.Name = "Selector";
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102 | EmptyOperator emptyOp = new EmptyOperator();
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103 | ProportionalSelector femaleSelector = new ProportionalSelector();
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104 | femaleSelector.GetVariableInfo("Selected").ActualName = "Parents";
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105 | femaleSelector.GetVariableValue<BoolData>("CopySelected", null, false).Data = true;
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106 |
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107 | RandomSelector maleSelector = new RandomSelector();
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108 | maleSelector.GetVariableInfo("Selected").ActualName = "Parents";
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109 | maleSelector.GetVariableValue<BoolData>("CopySelected", null, false).Data = true;
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110 | SequentialSubScopesProcessor seqSubScopesProc = new SequentialSubScopesProcessor();
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111 | RightChildReducer rightChildReducer = new RightChildReducer();
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112 | SubScopesMixer mixer = new SubScopesMixer();
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113 |
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114 | seqSubScopesProc.AddSubOperator(femaleSelector);
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115 | seqSubScopesProc.AddSubOperator(emptyOp);
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116 |
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117 | seq.AddSubOperator(maleSelector);
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118 | seq.AddSubOperator(seqSubScopesProc);
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119 | seq.AddSubOperator(rightChildReducer);
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120 | seq.AddSubOperator(mixer);
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121 |
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122 | selector.OperatorGraph.AddOperator(seq);
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123 | selector.OperatorGraph.InitialOperator = seq;
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124 | return selector;
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125 | }
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126 |
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127 | protected internal override IOperator CreateChildCreater() {
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128 | CombinedOperator childCreater = new CombinedOperator();
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129 | childCreater.Name = "Create children";
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130 | SequentialProcessor main = new SequentialProcessor();
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131 | SequentialProcessor seq = new SequentialProcessor();
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132 | SequentialProcessor offspringSelectionSeq = new SequentialProcessor();
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133 | OperatorExtractor selector = new OperatorExtractor();
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134 | selector.Name = "Selector (extr.)";
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135 | selector.GetVariableInfo("Operator").ActualName = "Selector";
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136 | SequentialSubScopesProcessor seqSubScopesProc = new SequentialSubScopesProcessor();
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137 | EmptyOperator emptyOp = new EmptyOperator();
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138 | OffspringSelector offspringSelector = new OffspringSelector();
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139 | ChildrenInitializer childInitializer = new ChildrenInitializer();
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140 | UniformSequentialSubScopesProcessor individualProc = new UniformSequentialSubScopesProcessor();
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141 | SequentialProcessor individualSeqProc = new SequentialProcessor();
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142 | OperatorExtractor crossover = new OperatorExtractor();
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143 | crossover.Name = "Crossover (extr.)";
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144 | crossover.GetVariableInfo("Operator").ActualName = "Crossover";
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145 | StochasticBranch cond = new StochasticBranch();
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146 | cond.GetVariableInfo("Probability").ActualName = "MutationRate";
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147 | OperatorExtractor manipulator = new OperatorExtractor();
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148 | manipulator.Name = "Manipulator (extr.)";
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149 | manipulator.GetVariableInfo("Operator").ActualName = "Manipulator";
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150 | OperatorExtractor evaluator = new OperatorExtractor();
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151 | evaluator.Name = "Evaluator (extr.)";
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152 | evaluator.GetVariableInfo("Operator").ActualName = "Evaluator";
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153 | Counter evalCounter = new Counter();
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154 | evalCounter.GetVariableInfo("Value").ActualName = "EvaluatedSolutions";
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155 | WeightedOffspringFitnessComparer offspringFitnessComparer = new WeightedOffspringFitnessComparer();
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156 | SubScopesRemover parentScopesRemover = new SubScopesRemover();
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157 |
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158 | Sorter sorter = new Sorter();
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159 | sorter.GetVariableInfo("Descending").ActualName = "Maximization";
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160 | sorter.GetVariableInfo("Value").ActualName = "Quality";
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161 |
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162 | UniformSequentialSubScopesProcessor validationEvaluator = new UniformSequentialSubScopesProcessor();
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163 | MeanSquaredErrorEvaluator validationQualityEvaluator = new MeanSquaredErrorEvaluator();
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164 | validationQualityEvaluator.Name = "ValidationMeanSquaredErrorEvaluator";
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165 | validationQualityEvaluator.GetVariableInfo("MSE").ActualName = "ValidationQuality";
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166 | validationQualityEvaluator.GetVariableInfo("SamplesStart").ActualName = "ValidationSamplesStart";
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167 | validationQualityEvaluator.GetVariableInfo("SamplesEnd").ActualName = "ValidationSamplesEnd";
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168 |
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169 | main.AddSubOperator(seq);
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170 | seq.AddSubOperator(selector);
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171 | seq.AddSubOperator(seqSubScopesProc);
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172 | seqSubScopesProc.AddSubOperator(emptyOp);
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173 | seqSubScopesProc.AddSubOperator(offspringSelectionSeq);
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174 | seq.AddSubOperator(offspringSelector);
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175 | offspringSelector.AddSubOperator(seq);
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176 |
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177 | offspringSelectionSeq.AddSubOperator(childInitializer);
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178 | offspringSelectionSeq.AddSubOperator(individualProc);
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179 | offspringSelectionSeq.AddSubOperator(sorter);
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180 |
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181 | individualProc.AddSubOperator(individualSeqProc);
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182 | individualSeqProc.AddSubOperator(crossover);
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183 | individualSeqProc.AddSubOperator(cond);
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184 | cond.AddSubOperator(manipulator);
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185 | individualSeqProc.AddSubOperator(evaluator);
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186 | individualSeqProc.AddSubOperator(evalCounter);
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187 | individualSeqProc.AddSubOperator(offspringFitnessComparer);
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188 | individualSeqProc.AddSubOperator(parentScopesRemover);
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189 |
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190 | SequentialSubScopesProcessor seqSubScopesProc2 = new SequentialSubScopesProcessor();
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191 | main.AddSubOperator(seqSubScopesProc2);
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192 | seqSubScopesProc2.AddSubOperator(emptyOp);
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193 |
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194 | SequentialProcessor newGenProc = new SequentialProcessor();
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195 | newGenProc.AddSubOperator(sorter);
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196 | newGenProc.AddSubOperator(validationEvaluator);
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197 | seqSubScopesProc2.AddSubOperator(newGenProc);
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198 |
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199 | validationEvaluator.AddSubOperator(validationQualityEvaluator);
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200 |
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201 | childCreater.OperatorGraph.AddOperator(main);
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202 | childCreater.OperatorGraph.InitialOperator = main;
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203 | return childCreater;
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204 | }
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205 |
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206 | protected internal override IOperator CreateLoopCondition(IOperator loop) {
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207 | SequentialProcessor seq = new SequentialProcessor();
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208 | seq.Name = "Loop Condition";
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209 | LessThanComparator generationsComparator = new LessThanComparator();
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210 | generationsComparator.GetVariableInfo("LeftSide").ActualName = "EvaluatedSolutions";
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211 | generationsComparator.GetVariableInfo("RightSide").ActualName = "MaxEvaluatedSolutions";
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212 | generationsComparator.GetVariableInfo("Result").ActualName = "EvaluatedSolutionsCondition";
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213 |
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214 | LessThanComparator selPresComparator = new LessThanComparator();
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215 | selPresComparator.GetVariableInfo("LeftSide").ActualName = "SelectionPressure";
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216 | selPresComparator.GetVariableInfo("RightSide").ActualName = "SelectionPressureLimit";
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217 | selPresComparator.GetVariableInfo("Result").ActualName = "SelectionPressureCondition";
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218 |
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219 | ConditionalBranch generationsCond = new ConditionalBranch();
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220 | generationsCond.GetVariableInfo("Condition").ActualName = "EvaluatedSolutionsCondition";
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221 |
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222 | ConditionalBranch selPresCond = new ConditionalBranch();
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223 | selPresCond.GetVariableInfo("Condition").ActualName = "SelectionPressureCondition";
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224 |
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225 | seq.AddSubOperator(generationsComparator);
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226 | seq.AddSubOperator(selPresComparator);
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227 | seq.AddSubOperator(generationsCond);
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228 | generationsCond.AddSubOperator(selPresCond);
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229 | selPresCond.AddSubOperator(loop);
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230 |
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231 | return seq;
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232 | }
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233 |
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234 | protected internal override IOperator CreateLoggingOperator() {
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235 | CombinedOperator loggingOperator = new CombinedOperator();
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236 | loggingOperator.Name = "Logging";
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237 | SequentialProcessor seq = new SequentialProcessor();
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238 |
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239 | DataCollector collector = new DataCollector();
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240 | ItemList<StringData> names = collector.GetVariable("VariableNames").GetValue<ItemList<StringData>>();
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241 | names.Add(new StringData("BestQuality"));
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242 | names.Add(new StringData("AverageQuality"));
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243 | names.Add(new StringData("WorstQuality"));
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244 | names.Add(new StringData("BestValidationQuality"));
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245 | names.Add(new StringData("AverageValidationQuality"));
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246 | names.Add(new StringData("WorstValidationQuality"));
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247 | names.Add(new StringData("EvaluatedSolutions"));
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248 | names.Add(new StringData("SelectionPressure"));
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249 | QualityLogger qualityLogger = new QualityLogger();
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250 | QualityLogger validationQualityLogger = new QualityLogger();
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251 | validationQualityLogger.Name = "ValidationQualityLogger";
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252 | validationQualityLogger.GetVariableInfo("Quality").ActualName = "ValidationQuality";
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253 | validationQualityLogger.GetVariableInfo("QualityLog").ActualName = "ValidationQualityLog";
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254 |
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255 | seq.AddSubOperator(collector);
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256 | seq.AddSubOperator(qualityLogger);
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257 | seq.AddSubOperator(validationQualityLogger);
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258 |
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259 | loggingOperator.OperatorGraph.AddOperator(seq);
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260 | loggingOperator.OperatorGraph.InitialOperator = seq;
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261 | return loggingOperator;
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262 | }
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263 |
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264 |
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265 | public override IEditor CreateEditor() {
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266 | return new OffspringSelectionGpEditor(this);
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267 | }
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268 |
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269 | public override IView CreateView() {
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270 | return new OffspringSelectionGpEditor(this);
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271 | }
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272 |
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273 | public override object Clone(IDictionary<Guid, object> clonedObjects) {
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274 | OffspringSelectionGP clone = (OffspringSelectionGP)base.Clone(clonedObjects);
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275 | clone.SelectionPressureLimit = SelectionPressureLimit;
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276 | clone.SuccessRatioLimit = SuccessRatioLimit;
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277 | clone.ComparisonFactor = ComparisonFactor;
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278 | return clone;
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279 | }
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280 | }
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281 | }
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