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source: branches/OKBJavaConnector/ECJClient/src/ec/vector/GeneVectorSpecies.java @ 8451

Last change on this file since 8451 was 6152, checked in by bfarka, 14 years ago

added ecj and custom statistics to communicate with the okb services #1441

File size: 1.6 KB
Line 
1/*
2  Copyright 2006 by Sean Luke
3  Licensed under the Academic Free License version 3.0
4  See the file "LICENSE" for more information
5*/
6
7
8package ec.vector;
9import ec.*;
10import ec.util.*;
11
12/*
13 * GeneVectorSpecies.java
14 *
15 * Created: Tue Feb 20 13:26:00 2001
16 * By: Sean Luke
17 */
18
19/**
20 * GeneVectorSpecies is a subclass of VectorSpecies with special
21 * constraints for GeneVectorIndividuals.
22 *
23 * <p>At present there is exactly one item stored in GeneVectorSpecies:
24 * the prototypical VectorGene that populates the genome array stored in a
25 * GeneVectorIndividual.
26 *
27 * @author Sean Luke
28 * @version 1.0
29 
30 <p><b>Parameters</b><br>
31 <table>
32 <tr><td valign=top><tt>gene</tt><br>
33 <font size=-1>classname, inherits and != ec.VectorGene</font></td>
34 <td valign=top>(the prototypical gene for this kind of individual)</td></tr>
35 </table>
36
37 <p><b>Parameter bases</b><br>
38 <table>
39 <tr><td valign=top><i>base</i>.<tt>gene</tt></td>
40 <td>The prototypical gene for this kind of individual</td></tr>
41 </table>
42
43*/
44 
45public class GeneVectorSpecies extends VectorSpecies
46    {
47    public static final String P_GENE = "gene";
48    public VectorGene genePrototype;
49
50    public void setup(final EvolutionState state, final Parameter base)
51        {
52        Parameter def = defaultBase();
53
54        genePrototype = (VectorGene)(state.parameters.getInstanceForParameterEq(
55                base.push(P_GENE),def.push(P_GENE),VectorGene.class));
56        genePrototype.setup(state,base.push(P_GENE));
57
58        // make sure that super.setup is done AFTER we've loaded our gene prototype.
59        super.setup(state,base);
60        }
61       
62    }
63
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