[6152] | 1 | /* |
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| 2 | Copyright 2006 by Sean Luke |
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| 3 | Licensed under the Academic Free License version 3.0 |
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| 4 | See the file "LICENSE" for more information |
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| 5 | */ |
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| 6 | |
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| 7 | |
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| 8 | package ec.steadystate; |
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| 9 | import ec.*; |
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| 10 | import ec.util.Parameter; |
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| 11 | import ec.util.Checkpoint; |
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| 12 | import ec.util.Output; |
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| 13 | import ec.simple.*; |
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| 14 | //import ec.eval.MasterProblem; |
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| 15 | import java.util.*; |
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| 16 | |
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| 17 | /* |
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| 18 | * SteadyStateEvolutionState.java |
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| 19 | * |
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| 20 | */ |
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| 21 | |
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| 22 | /** |
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| 23 | * This subclass of EvolutionState implements basic Steady-State Evolution and (in distributed form) |
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| 24 | * Asynchronous Evolution. The procedure is as follows. We begin with an empty Population and one by |
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| 25 | * one create new Indivdiuals and send them off to be evaluated. In basic Steady-State Evolution the |
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| 26 | * individuals are immediately evaluated and we wait for them; but in Asynchronous Evolution the individuals are evaluated |
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| 27 | * for however long it takes and we don't wait for them to finish. When individuals return they are |
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| 28 | * added to the Population until it is full. No duplicate individuals are allowed. |
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| 29 | * |
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| 30 | * <p>At this point the system switches to its "steady state": individuals are bred from the population |
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| 31 | * one by one, and sent off to be evaluated. Once again, in basic Steady-State Evolution the |
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| 32 | * individuals are immediately evaluated and we wait for them; but in Asynchronous Evolution the individuals are evaluated |
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| 33 | * for however long it takes and we don't wait for them to finish. When an individual returns, we |
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| 34 | * mark an individual in the Population for death, then replace it with the new returning individual. |
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| 35 | * Note that during the steady-state, Asynchronous Evolution could be still sending back some "new" individuals |
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| 36 | * created during the initialization phase, not "bred" individuals. |
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| 37 | * |
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| 38 | * <p>The determination of how an individual is marked for death is done by the SteadyStateBreeder. |
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| 39 | * |
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| 40 | * <p>SteadyStateEvolutionState will run either for some N "generations" or for some M evaluations of |
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| 41 | * individuals. A "generation" is defined as a Population's worth of evaluations. If you do not |
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| 42 | * specify the number of evaluations (the M), then SteadyStateEvolutionState will use the standard |
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| 43 | * generations parameter defined in EvolutionState. |
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| 44 | * |
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| 45 | |
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| 46 | <p><b>Parameters</b><br> |
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| 47 | <table> |
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| 48 | <tr><td valign=top><tt>evaluations</tt><br> |
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| 49 | <font size=-1>int >= 1</font></td> |
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| 50 | <td valign=top>(maximal number of evaluations to run.)</td></tr> |
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| 51 | </table> |
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| 52 | |
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| 53 | * |
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| 54 | * @author Sean Luke |
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| 55 | * @version 1.0 |
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| 56 | */ |
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| 57 | |
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| 58 | |
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| 59 | public class SteadyStateEvolutionState extends EvolutionState |
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| 60 | { |
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| 61 | /** base parameter for steady-state */ |
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| 62 | public static final String P_NUMEVALUATIONS = "evaluations"; |
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| 63 | |
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| 64 | /** Did we just start a new generation? */ |
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| 65 | public boolean generationBoundary; |
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| 66 | /** How many evaluations should we run for? If set to UNDEFINED (0), we run for the number of generations instead. */ |
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| 67 | public long numEvaluations; |
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| 68 | public static long UNDEFINED = 0; |
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| 69 | /** how big is a generation? Set to the size of subpopulation 0 of the initial population. */ |
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| 70 | public int generationSize; |
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| 71 | /** How many evaluations have we run so far? */ |
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| 72 | public long evaluations; |
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| 73 | |
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| 74 | /** How many individuals have we added to the initial population? */ |
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| 75 | int[] individualCount; |
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| 76 | |
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| 77 | /** Hash table to check for duplicate individuals */ |
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| 78 | HashMap[] individualHash; |
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| 79 | |
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| 80 | /** Holds which subpopulation we are currently operating on */ |
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| 81 | int whichSubpop; |
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| 82 | |
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| 83 | /** First time calling evolve */ |
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| 84 | protected boolean firstTime; |
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| 85 | |
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| 86 | public void setup(final EvolutionState state, final Parameter base) |
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| 87 | { |
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| 88 | super.setup(state,base); |
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| 89 | |
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| 90 | // double check that we have valid evaluators and breeders and exchangers |
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| 91 | if (!(breeder instanceof SteadyStateBreeder)) |
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| 92 | state.output.error("You've chosen to use Steady-State Evolution, but your breeder is not of the class SteadyStateBreeder.",base); |
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| 93 | if (!(evaluator instanceof SteadyStateEvaluator)) |
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| 94 | state.output.error("You've chosen to use Steady-State Evolution, but your evaluator is not of the class SteadyStateEvaluator.",base); |
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| 95 | if (!(exchanger instanceof SteadyStateExchangerForm)) |
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| 96 | state.output.error("You've chosen to use Steady-State Evolution, but your exchanger does not implement the SteadyStateExchangerForm.",base); |
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| 97 | |
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| 98 | checkStatistics(state, statistics, base); |
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| 99 | |
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| 100 | numEvaluations = parameters.getLong(new Parameter(P_NUMEVALUATIONS),null,1); |
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| 101 | if (numEvaluations == 0) |
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| 102 | output.message("Number of evaluations not defined; using number of generations"); |
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| 103 | } |
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| 104 | |
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| 105 | // recursively prints out warnings for all statistics that are not |
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| 106 | // of steadystate statistics form |
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| 107 | void checkStatistics(final EvolutionState state, Statistics stat, final Parameter base) |
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| 108 | { |
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| 109 | if (!(stat instanceof SteadyStateStatisticsForm)) |
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| 110 | state.output.warning("You've chosen to use Steady-State Evolution, but your statistics does not implement the SteadyStateStatisticsForm.",base); |
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| 111 | for(int x=0;x<stat.children.length;x++) |
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| 112 | if (stat.children[x]!=null) |
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| 113 | checkStatistics(state, stat.children[x], base.push("child").push(""+x)); |
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| 114 | } |
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| 115 | |
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| 116 | |
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| 117 | /** |
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| 118 | * |
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| 119 | */ |
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| 120 | public void startFresh() |
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| 121 | { |
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| 122 | output.message("Setting up"); |
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| 123 | setup(this,null); // a garbage Parameter |
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| 124 | |
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| 125 | // POPULATION INITIALIZATION |
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| 126 | output.message("Initializing Generation 0"); |
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| 127 | statistics.preInitializationStatistics(this); |
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| 128 | population = initializer.setupPopulation(this, 0); // unthreaded. We're NOT initializing here, just setting up. |
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| 129 | |
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| 130 | // INITIALIZE VARIABLES |
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| 131 | if (numEvaluations > 0 && numEvaluations < population.subpops[0].individuals.length) |
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| 132 | output.fatal("Number of evaluations desired is smaller than the initial population of individuals"); |
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| 133 | generationSize = 0; |
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| 134 | generationBoundary = false; |
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| 135 | firstTime = true; |
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| 136 | evaluations=0; |
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| 137 | whichSubpop=-1; |
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| 138 | |
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| 139 | individualHash = new HashMap[population.subpops.length]; |
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| 140 | for(int i=0;i<population.subpops.length; i++) individualHash[i] = new HashMap(); |
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| 141 | |
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| 142 | individualCount = new int[population.subpops.length]; |
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| 143 | for (int sub=0; sub < population.subpops.length; sub++) |
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| 144 | { |
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| 145 | individualCount[sub]=0; |
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| 146 | generationSize += population.subpops[sub].individuals.length; // so our sum total 'generationSize' will be the initial total number of individuals |
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| 147 | } |
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| 148 | |
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| 149 | // INITIALIZE CONTACTS -- done after initialization to allow |
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| 150 | // a hook for the user to do things in Initializer before |
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| 151 | // an attempt is made to connect to island models etc. |
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| 152 | exchanger.initializeContacts(this); |
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| 153 | evaluator.initializeContacts(this); |
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| 154 | } |
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| 155 | |
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| 156 | |
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| 157 | |
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| 158 | public int evolve() |
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| 159 | { |
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| 160 | if (generationBoundary && generation > 0) |
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| 161 | { |
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| 162 | output.message("Generation " + generation +"\tEvaluations " + evaluations); |
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| 163 | statistics.generationBoundaryStatistics(this); |
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| 164 | statistics.postEvaluationStatistics(this); |
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| 165 | } |
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| 166 | |
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| 167 | if (firstTime) |
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| 168 | { |
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| 169 | if (statistics instanceof SteadyStateStatisticsForm) |
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| 170 | ((SteadyStateStatisticsForm)statistics).enteringInitialPopulationStatistics(this); |
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| 171 | statistics.postInitializationStatistics(this); |
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| 172 | ((SteadyStateBreeder)breeder).prepareToBreed(this, 0); // unthreaded |
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| 173 | ((SteadyStateEvaluator)evaluator).prepareToEvaluate(this, 0); // unthreaded |
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| 174 | firstTime=false; |
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| 175 | } |
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| 176 | |
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| 177 | whichSubpop = (whichSubpop+1)%population.subpops.length; // round robin selection |
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| 178 | |
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| 179 | // is the current subpop full? |
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| 180 | boolean partiallyFullSubpop = (individualCount[whichSubpop] < population.subpops[whichSubpop].individuals.length); |
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| 181 | |
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| 182 | // MAIN EVOLVE LOOP |
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| 183 | if (((SteadyStateEvaluator) evaluator).canEvaluate()) // are we ready to evaluate? |
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| 184 | { |
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| 185 | Individual ind=null; |
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| 186 | int numDuplicateRetries = population.subpops[whichSubpop].numDuplicateRetries; |
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| 187 | |
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| 188 | for (int tries=0; tries <= numDuplicateRetries; tries++) // see Subpopulation |
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| 189 | { |
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| 190 | if ( partiallyFullSubpop ) // is population full? |
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| 191 | { |
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| 192 | ind = population.subpops[whichSubpop].species.newIndividual(this, 0); // unthreaded |
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| 193 | } |
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| 194 | else |
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| 195 | { |
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| 196 | ind = ((SteadyStateBreeder)breeder).breedIndividual(this, whichSubpop,0); |
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| 197 | statistics.individualsBredStatistics(this, new Individual[]{ind}); |
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| 198 | } |
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| 199 | |
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| 200 | if (numDuplicateRetries >= 1) |
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| 201 | { |
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| 202 | Object o = individualHash[whichSubpop].get(ind); |
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| 203 | if (o == null) |
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| 204 | { |
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| 205 | individualHash[whichSubpop].put(ind, ind); |
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| 206 | break; |
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| 207 | } |
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| 208 | } |
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| 209 | } // tried to cut down the duplicates |
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| 210 | |
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| 211 | // evaluate the new individual |
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| 212 | ((SteadyStateEvaluator)evaluator).evaluateIndividual(this, ind, whichSubpop); |
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| 213 | } |
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| 214 | |
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| 215 | Individual ind = ((SteadyStateEvaluator)evaluator).getNextEvaluatedIndividual(); |
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| 216 | if (ind != null) // do we have an evaluated individual? |
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| 217 | { |
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| 218 | int subpop = ((SteadyStateEvaluator)evaluator).getSubpopulationOfEvaluatedIndividual(); |
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| 219 | |
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| 220 | if ( partiallyFullSubpop ) // is subpopulation full? |
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| 221 | { |
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| 222 | population.subpops[subpop].individuals[individualCount[subpop]++]=ind; |
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| 223 | |
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| 224 | // STATISTICS FOR GENERATION ZERO |
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| 225 | if ( individualCount[subpop] == population.subpops[subpop].individuals.length ) |
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| 226 | if (statistics instanceof SteadyStateStatisticsForm) |
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| 227 | ((SteadyStateStatisticsForm)statistics).enteringSteadyStateStatistics(subpop, this); |
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| 228 | } |
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| 229 | else |
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| 230 | { |
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| 231 | // mark individual for death |
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| 232 | int deadIndividual = ((SteadyStateBreeder)breeder).deselectors[subpop].produce(subpop,this,0); |
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| 233 | Individual deadInd = population.subpops[subpop].individuals[deadIndividual]; |
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| 234 | |
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| 235 | // replace dead individual with new individual |
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| 236 | population.subpops[subpop].individuals[deadIndividual] = ind; |
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| 237 | |
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| 238 | // update duplicate hash table |
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| 239 | individualHash[subpop].remove(deadInd); |
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| 240 | |
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| 241 | if (statistics instanceof SteadyStateStatisticsForm) |
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| 242 | ((SteadyStateStatisticsForm)statistics).individualsEvaluatedStatistics(this, |
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| 243 | new Individual[]{ind}, new Individual[]{deadInd}, new int[]{subpop}, new int[]{deadIndividual}); |
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| 244 | } |
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| 245 | |
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| 246 | // INCREMENT NUMBER OF COMPLETED EVALUATIONS |
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| 247 | evaluations++; |
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| 248 | |
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| 249 | // COMPUTE GENERATION BOUNDARY |
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| 250 | generationBoundary = (evaluations % generationSize == 0); |
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| 251 | } |
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| 252 | else |
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| 253 | { |
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| 254 | generationBoundary = false; |
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| 255 | } |
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| 256 | |
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| 257 | // SHOULD WE QUIT? |
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| 258 | if (!partiallyFullSubpop && evaluator.runComplete(this) && quitOnRunComplete) |
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| 259 | { |
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| 260 | output.message("Found Ideal Individual"); |
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| 261 | return R_SUCCESS; |
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| 262 | } |
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| 263 | |
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| 264 | if ((numEvaluations > 0 && evaluations >= numEvaluations) || // using numEvaluations |
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| 265 | (numEvaluations <= 0 && generationBoundary && generation == numGenerations -1)) // not using numEvaluations |
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| 266 | { |
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| 267 | return R_FAILURE; |
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| 268 | } |
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| 269 | |
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| 270 | |
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| 271 | // EXCHANGING |
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| 272 | if (generationBoundary) |
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| 273 | { |
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| 274 | // PRE-BREED EXCHANGE |
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| 275 | statistics.prePreBreedingExchangeStatistics(this); |
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| 276 | population = exchanger.preBreedingExchangePopulation(this); |
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| 277 | statistics.postPreBreedingExchangeStatistics(this); |
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| 278 | String exchangerWantsToShutdown = exchanger.runComplete(this); |
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| 279 | if (exchangerWantsToShutdown!=null) |
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| 280 | { |
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| 281 | output.message(exchangerWantsToShutdown); |
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| 282 | return R_SUCCESS; |
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| 283 | } |
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| 284 | |
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| 285 | // POST BREED EXCHANGE |
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| 286 | statistics.prePostBreedingExchangeStatistics(this); |
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| 287 | population = exchanger.postBreedingExchangePopulation(this); |
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| 288 | statistics.postPostBreedingExchangeStatistics(this); |
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| 289 | |
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| 290 | // INCREMENT GENERATION AND CHECKPOINT |
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| 291 | generation++; |
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| 292 | if (checkpoint && generation%checkpointModulo == 0) |
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| 293 | { |
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| 294 | output.message("Checkpointing"); |
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| 295 | statistics.preCheckpointStatistics(this); |
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| 296 | Checkpoint.setCheckpoint(this); |
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| 297 | statistics.postCheckpointStatistics(this); |
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| 298 | } |
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| 299 | } |
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| 300 | return R_NOTDONE; |
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| 301 | } |
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| 302 | |
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| 303 | /** |
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| 304 | * @param result |
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| 305 | */ |
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| 306 | public void finish(int result) |
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| 307 | { |
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| 308 | /* finish up -- we completed. */ |
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| 309 | ((SteadyStateBreeder)breeder).finishPipelines(this); |
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| 310 | statistics.finalStatistics(this,result); |
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| 311 | finisher.finishPopulation(this,result); |
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| 312 | exchanger.closeContacts(this,result); |
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| 313 | evaluator.closeContacts(this,result); |
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| 314 | } |
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| 315 | } |
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