1 | /* |
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2 | Copyright 2006 by Sean Luke |
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3 | Licensed under the Academic Free License version 3.0 |
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4 | See the file "LICENSE" for more information |
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5 | */ |
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6 | |
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7 | |
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8 | package ec.simple; |
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9 | import ec.*; |
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10 | import ec.steadystate.*; |
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11 | import java.io.IOException; |
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12 | import ec.util.*; |
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13 | import java.io.File; |
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14 | |
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15 | /* |
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16 | * SimpleStatistics.java |
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17 | * |
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18 | * Created: Tue Aug 10 21:10:48 1999 |
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19 | * By: Sean Luke |
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20 | */ |
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21 | |
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22 | /** |
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23 | * A basic Statistics class suitable for simple problem applications. |
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24 | * |
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25 | * SimpleStatistics prints out the best individual, per subpopulation, |
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26 | * each generation. At the end of a run, it also prints out the best |
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27 | * individual of the run. SimpleStatistics outputs this data to a log |
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28 | * which may either be a provided file or stdout. Compressed files will |
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29 | * be overridden on restart from checkpoint; uncompressed files will be |
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30 | * appended on restart. |
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31 | * |
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32 | * <p>SimpleStatistics implements a simple version of steady-state statistics: |
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33 | * if it quits before a generation boundary, |
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34 | * it will include the best individual discovered, even if the individual was discovered |
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35 | * after the last boundary. This is done by using individualsEvaluatedStatistics(...) |
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36 | * to update best-individual-of-generation in addition to doing it in |
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37 | * postEvaluationStatistics(...). |
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38 | |
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39 | <p><b>Parameters</b><br> |
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40 | <table> |
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41 | <tr><td valign=top><i>base.</i><tt>gzip</tt><br> |
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42 | <font size=-1>boolean</font></td> |
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43 | <td valign=top>(whether or not to compress the file (.gz suffix added)</td></tr> |
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44 | <tr><td valign=top><i>base.</i><tt>file</tt><br> |
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45 | <font size=-1>String (a filename), or nonexistant (signifies stdout)</font></td> |
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46 | <td valign=top>(the log for statistics)</td></tr> |
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47 | </table> |
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48 | |
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49 | * |
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50 | * @author Sean Luke |
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51 | * @version 1.0 |
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52 | */ |
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53 | |
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54 | public class SimpleStatistics extends Statistics implements SteadyStateStatisticsForm //, ec.eval.ProvidesBestSoFar |
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55 | { |
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56 | public Individual[] getBestSoFar() { return best_of_run; } |
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57 | |
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58 | /** log file parameter */ |
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59 | public static final String P_STATISTICS_FILE = "file"; |
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60 | |
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61 | /** compress? */ |
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62 | public static final String P_COMPRESS = "gzip"; |
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63 | |
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64 | /** The Statistics' log */ |
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65 | public int statisticslog; |
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66 | |
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67 | /** The best individual we've found so far */ |
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68 | public Individual[] best_of_run; |
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69 | |
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70 | /** Should we compress the file? */ |
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71 | public boolean compress; |
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72 | |
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73 | |
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74 | public SimpleStatistics() { best_of_run = null; statisticslog = 0; /* stdout */ } |
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75 | |
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76 | public void setup(final EvolutionState state, final Parameter base) |
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77 | { |
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78 | super.setup(state,base); |
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79 | |
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80 | compress = state.parameters.getBoolean(base.push(P_COMPRESS),null,false); |
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81 | |
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82 | File statisticsFile = state.parameters.getFile( |
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83 | base.push(P_STATISTICS_FILE),null); |
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84 | |
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85 | if (statisticsFile!=null) |
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86 | try |
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87 | { |
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88 | statisticslog = state.output.addLog(statisticsFile, !compress, compress); |
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89 | } |
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90 | catch (IOException i) |
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91 | { |
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92 | state.output.fatal("An IOException occurred while trying to create the log " + statisticsFile + ":\n" + i); |
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93 | } |
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94 | } |
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95 | |
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96 | public void postInitializationStatistics(final EvolutionState state) |
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97 | { |
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98 | super.postInitializationStatistics(state); |
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99 | |
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100 | // set up our best_of_run array -- can't do this in setup, because |
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101 | // we don't know if the number of subpopulations has been determined yet |
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102 | best_of_run = new Individual[state.population.subpops.length]; |
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103 | } |
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104 | |
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105 | /** Logs the best individual of the generation. */ |
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106 | public void postEvaluationStatistics(final EvolutionState state) |
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107 | { |
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108 | super.postEvaluationStatistics(state); |
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109 | |
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110 | // for now we just print the best fitness per subpopulation. |
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111 | Individual[] best_i = new Individual[state.population.subpops.length]; // quiets compiler complaints |
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112 | for(int x=0;x<state.population.subpops.length;x++) |
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113 | { |
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114 | best_i[x] = state.population.subpops[x].individuals[0]; |
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115 | for(int y=1;y<state.population.subpops[x].individuals.length;y++) |
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116 | if (state.population.subpops[x].individuals[y].fitness.betterThan(best_i[x].fitness)) |
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117 | best_i[x] = state.population.subpops[x].individuals[y]; |
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118 | |
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119 | // now test to see if it's the new best_of_run |
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120 | if (best_of_run[x]==null || best_i[x].fitness.betterThan(best_of_run[x].fitness)) |
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121 | best_of_run[x] = (Individual)(best_i[x].clone()); |
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122 | } |
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123 | |
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124 | // print the best-of-generation individual |
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125 | state.output.println("\nGeneration: " + state.generation,statisticslog); |
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126 | state.output.println("Best Individual:",statisticslog); |
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127 | for(int x=0;x<state.population.subpops.length;x++) |
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128 | { |
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129 | state.output.println("Subpopulation " + x + ":",statisticslog); |
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130 | best_i[x].printIndividualForHumans(state,statisticslog); |
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131 | state.output.message("Subpop " + x + " best fitness of generation: " + best_i[x].fitness.fitnessToStringForHumans()); |
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132 | } |
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133 | } |
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134 | |
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135 | /** Logs the best individual of the run. */ |
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136 | public void finalStatistics(final EvolutionState state, final int result) |
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137 | { |
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138 | super.finalStatistics(state,result); |
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139 | |
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140 | // for now we just print the best fitness |
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141 | |
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142 | state.output.println("\nBest Individual of Run:",statisticslog); |
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143 | for(int x=0;x<state.population.subpops.length;x++ ) |
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144 | { |
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145 | state.output.println("Subpopulation " + x + ":",statisticslog); |
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146 | best_of_run[x].printIndividualForHumans(state,statisticslog); |
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147 | state.output.message("Subpop " + x + " best fitness of run: " + best_of_run[x].fitness.fitnessToStringForHumans()); |
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148 | |
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149 | // finally describe the winner if there is a description |
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150 | if (state.evaluator.p_problem instanceof SimpleProblemForm) |
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151 | ((SimpleProblemForm)(state.evaluator.p_problem.clone())).describe(state, best_of_run[x], x, 0, statisticslog); |
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152 | } |
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153 | } |
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154 | } |
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