1 | /* |
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2 | Copyright 2006 by Sean Luke |
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3 | Licensed under the Academic Free License version 3.0 |
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4 | See the file "LICENSE" for more information |
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5 | */ |
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6 | |
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7 | |
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8 | package ec.gp.breed; |
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9 | import ec.*; |
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10 | import ec.util.*; |
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11 | import ec.gp.*; |
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12 | |
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13 | /* |
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14 | * InternalCrossoverPipeline.java |
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15 | * |
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16 | * Created: Wed Dec 15 21:41:30 1999 |
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17 | * By: Sean Luke |
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18 | */ |
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19 | |
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20 | /** |
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21 | * InternalCrossoverPipeline picks two subtrees from somewhere within an individual, |
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22 | * and crosses them over. Before doing so, it checks to make sure that the |
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23 | * subtrees come from trees with the same tree constraints, that the subtrees |
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24 | * are swap-compatible with each other, that the new individual does not violate |
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25 | * depth constraints, and that one subtree does not contain the other. It tries |
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26 | * <tt>tries</tt> times to find a valid subtree pair to cross over. Failing this, |
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27 | * it just copies the individual. |
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28 | * |
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29 | |
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30 | <p><b>Typical Number of Individuals Produced Per <tt>produce(...)</tt> call</b><br> |
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31 | ...as many as the source produces |
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32 | |
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33 | <p><b>Number of Sources</b><br> |
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34 | 1 |
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35 | |
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36 | <p><b>Parameters</b><br> |
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37 | <table> |
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38 | <tr><td valign=top><i>base</i>.<tt>tries</tt><br> |
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39 | <font size=-1>int >= 1</font></td> |
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40 | <td valign=top>(number of times to try finding valid pairs of nodes)</td></tr> |
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41 | |
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42 | <tr><td valign=top><i>base</i>.<tt>maxdepth</tt><br> |
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43 | <font size=-1>int >= 1</font></td> |
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44 | <td valign=top>(maximum valid depth of the crossed-over individual's trees)</td></tr> |
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45 | |
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46 | <tr><td valign=top><i>base</i>.<tt>ns.</tt>0<br> |
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47 | <font size=-1>classname, inherits and != GPNodeSelector</font></td> |
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48 | <td valign=top>(GPNodeSelector for subtree 0. </td></tr> |
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49 | |
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50 | <tr><td valign=top><i>base</i>.<tt>ns.</tt>1<br> |
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51 | <font size=-1>classname, inherits and != GPNodeSelector,<br> |
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52 | or String <tt>same<tt></font></td> |
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53 | <td valign=top>(GPNodeSelector for subtree 1. If value is <tt>same</tt>, then <tt>ns.1</tt> a copy of whatever <tt>ns.0</tt> is)</td></tr> |
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54 | |
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55 | <tr><td valign=top><i>base</i>.<tt>tree.0</tt><br> |
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56 | <font size=-1>0 < int < (num trees in individuals), if exists</font></td> |
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57 | <td valign=top>(first tree for the crossover; if parameter doesn't exist, tree is picked at random)</td></tr> |
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58 | |
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59 | <tr><td valign=top><i>base</i>.<tt>tree.1</tt><br> |
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60 | <font size=-1>0 < int < (num trees in individuals), if exists</font></td> |
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61 | <td valign=top>(second tree for the crossover; if parameter doesn't exist, tree is picked at random. This tree <b>must</b> have the same GPTreeConstraints as <tt>tree.0</tt>, if <tt>tree.0</tt> is defined.)</td></tr> |
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62 | |
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63 | </table> |
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64 | |
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65 | <p><b>Default Base</b><br> |
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66 | gp.breed.internal-xover |
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67 | |
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68 | <p><b>Parameter bases</b><br> |
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69 | <table> |
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70 | <tr><td valign=top><i>base</i>.<tt>ns.</tt><i>n</i><br> |
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71 | <td>nodeselect<i>n</i> (<i>n</i> is 0 or 1)</td></tr> |
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72 | </table> |
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73 | |
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74 | </table> |
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75 | |
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76 | |
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77 | * @author Sean Luke |
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78 | * @version 1.0 |
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79 | */ |
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80 | |
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81 | public class InternalCrossoverPipeline extends GPBreedingPipeline |
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82 | { |
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83 | public static final String P_INTERNALCROSSOVER = "internal-xover"; |
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84 | public static final String P_NUM_TRIES = "tries"; |
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85 | public static final String P_MAXDEPTH = "maxdepth"; |
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86 | public static final int NUM_SOURCES = 1; |
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87 | |
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88 | |
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89 | /** How the pipeline chooses the first subtree */ |
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90 | public GPNodeSelector nodeselect0; |
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91 | |
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92 | /** How the pipeline chooses the second subtree */ |
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93 | public GPNodeSelector nodeselect1; |
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94 | |
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95 | /** How many times the pipeline attempts to pick nodes until it gives up. */ |
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96 | public int numTries; |
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97 | |
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98 | /** The deepest tree the pipeline is allowed to form. Single terminal trees are depth 1. */ |
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99 | public int maxDepth; |
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100 | |
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101 | /** Is the first tree fixed? If not, this is -1 */ |
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102 | public int tree1; |
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103 | |
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104 | /** Is the second tree fixed? If not, this is -1 */ |
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105 | public int tree2; |
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106 | |
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107 | |
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108 | public Parameter defaultBase() { return GPBreedDefaults.base().push(P_INTERNALCROSSOVER); } |
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109 | |
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110 | public int numSources() { return NUM_SOURCES; } |
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111 | |
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112 | public Object clone() |
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113 | { |
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114 | InternalCrossoverPipeline c = (InternalCrossoverPipeline)(super.clone()); |
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115 | |
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116 | // deep-cloned stuff |
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117 | c.nodeselect0 = (GPNodeSelector)(nodeselect0.clone()); |
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118 | c.nodeselect1 = (GPNodeSelector)(nodeselect1.clone()); |
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119 | return c; |
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120 | } |
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121 | |
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122 | public void setup(final EvolutionState state, final Parameter base) |
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123 | { |
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124 | super.setup(state,base); |
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125 | |
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126 | Parameter def = defaultBase(); |
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127 | Parameter p = base.push(P_NODESELECTOR).push("0"); |
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128 | Parameter d = def.push(P_NODESELECTOR).push("0"); |
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129 | |
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130 | nodeselect0 = (GPNodeSelector) |
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131 | (state.parameters.getInstanceForParameter( |
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132 | p,d, GPNodeSelector.class)); |
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133 | nodeselect0.setup(state,p); |
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134 | |
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135 | p = base.push(P_NODESELECTOR).push("1"); |
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136 | d = def.push(P_NODESELECTOR).push("1"); |
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137 | |
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138 | if (state.parameters.exists(p,d) && |
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139 | state.parameters.getString(p,d).equals(V_SAME)) |
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140 | // can't just copy it this time; the selectors |
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141 | // use internal caches. So we have to clone it no matter what |
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142 | nodeselect1 = (GPNodeSelector)(nodeselect0.clone()); |
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143 | else |
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144 | { |
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145 | nodeselect1 = (GPNodeSelector) |
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146 | (state.parameters.getInstanceForParameter( |
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147 | p,d, GPNodeSelector.class)); |
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148 | nodeselect1.setup(state,p); |
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149 | } |
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150 | |
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151 | numTries = state.parameters.getInt(base.push(P_NUM_TRIES), |
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152 | def.push(P_NUM_TRIES),1); |
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153 | if (numTries == 0) |
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154 | state.output.fatal("InternalCrossover Pipeline has an invalid number of tries (it must be >= 1).",base.push(P_NUM_TRIES),def.push(P_NUM_TRIES)); |
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155 | |
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156 | maxDepth = state.parameters.getInt(base.push(P_MAXDEPTH),def.push(P_MAXDEPTH),1); |
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157 | if (maxDepth==0) |
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158 | state.output.fatal("InternalCrossover Pipeline has an invalid maximum depth (it must be >= 1).",base.push(P_MAXDEPTH),def.push(P_MAXDEPTH)); |
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159 | |
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160 | tree1 = TREE_UNFIXED; |
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161 | if (state.parameters.exists(base.push(P_TREE).push(""+0), |
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162 | def.push(P_TREE).push(""+0))) |
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163 | { |
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164 | tree1 = state.parameters.getInt(base.push(P_TREE).push(""+0), |
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165 | def.push(P_TREE).push(""+0),0); |
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166 | if (tree1==-1) |
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167 | state.output.fatal("Tree fixed value, if defined, must be >= 0"); |
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168 | } |
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169 | |
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170 | tree2 = TREE_UNFIXED; |
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171 | if (state.parameters.exists(base.push(P_TREE).push(""+1), |
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172 | def.push(P_TREE).push(""+1))) |
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173 | { |
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174 | tree2 = state.parameters.getInt(base.push(P_TREE).push(""+1), |
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175 | def.push(P_TREE).push(""+1),0); |
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176 | if (tree2==-1) |
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177 | state.output.fatal("Tree fixed value, if defined, must be >= 0"); |
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178 | } |
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179 | } |
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180 | |
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181 | |
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182 | |
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183 | /** Returns true if inner1 and inner2 do not contain one another */ |
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184 | private boolean noContainment(GPNode inner1, GPNode inner2) |
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185 | { |
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186 | GPNodeParent current = inner1; |
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187 | while(current != null && current instanceof GPNode) |
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188 | { |
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189 | if (current==inner2) return false; // inner2 contains inner1 |
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190 | current = ((GPNode)current).parent; |
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191 | } |
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192 | current = inner2; |
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193 | while(current != null && current instanceof GPNode) |
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194 | { |
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195 | if (current==inner1) return false; // inner1 contains inner2 |
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196 | current = ((GPNode)current).parent; |
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197 | } |
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198 | return true; |
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199 | } |
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200 | |
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201 | /** Returns true if inner1 can feasibly be swapped into inner2's position. */ |
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202 | |
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203 | boolean verifyPoints(GPInitializer initializer, GPNode inner1, GPNode inner2) |
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204 | { |
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205 | // first check to see if inner1 is swap-compatible with inner2 |
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206 | // on a type basis |
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207 | if (!inner1.swapCompatibleWith(initializer, inner2)) return false; |
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208 | |
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209 | // next check to see if inner1 can fit in inner2's spot |
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210 | if (inner1.depth()+inner2.atDepth() > maxDepth) return false; |
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211 | |
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212 | // checks done! |
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213 | return true; |
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214 | } |
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215 | |
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216 | |
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217 | public int produce(final int min, |
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218 | final int max, |
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219 | final int start, |
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220 | final int subpopulation, |
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221 | final Individual[] inds, |
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222 | final EvolutionState state, |
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223 | final int thread) |
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224 | |
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225 | { |
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226 | // grab n individuals from our source and stick 'em right into inds. |
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227 | // we'll modify them from there |
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228 | int n = sources[0].produce(min,max,start,subpopulation,inds,state,thread); |
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229 | |
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230 | |
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231 | // should we bother? |
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232 | if (!state.random[thread].nextBoolean(likelihood)) |
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233 | return reproduce(n, start, subpopulation, inds, state, thread, false); // DON'T produce children from source -- we already did |
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234 | |
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235 | |
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236 | |
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237 | GPInitializer initializer = ((GPInitializer)state.initializer); |
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238 | |
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239 | for(int q=start;q<n+start; q++) |
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240 | { |
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241 | GPIndividual i = (GPIndividual)inds[q]; |
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242 | |
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243 | if (tree1!=TREE_UNFIXED && (tree1<0 || tree1 >= i.trees.length)) |
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244 | // uh oh |
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245 | state.output.fatal("Internal Crossover Pipeline attempted to fix tree.0 to a value which was out of bounds of the array of the individual's trees. Check the pipeline's fixed tree values -- they may be negative or greater than the number of trees in an individual"); |
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246 | |
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247 | if (tree2!=TREE_UNFIXED && (tree2<0 || tree2 >= i.trees.length)) |
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248 | // uh oh |
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249 | state.output.fatal("Internal Crossover Pipeline attempted to fix tree.0 to a value which was out of bounds of the array of the individual's trees. Check the pipeline's fixed tree values -- they may be negative or greater than the number of trees in an individual"); |
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250 | |
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251 | GPIndividual j; |
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252 | if (sources[0] instanceof BreedingPipeline) |
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253 | // it's already a copy, so just smash the tree in |
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254 | { |
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255 | j=i; |
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256 | } |
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257 | else // need to copy it |
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258 | { |
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259 | j = (GPIndividual)(i.lightClone()); |
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260 | |
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261 | // Fill in various tree information that didn't get filled in there |
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262 | j.trees = new GPTree[i.trees.length]; |
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263 | |
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264 | for(int x=0;x<j.trees.length;x++) |
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265 | { |
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266 | j.trees[x] = (GPTree)(i.trees[x].lightClone()); // light clone |
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267 | j.trees[x].owner = j; |
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268 | j.trees[x].child = (GPNode)(i.trees[x].child.clone()); |
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269 | j.trees[x].child.parent = j.trees[x]; |
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270 | j.trees[x].child.argposition = 0; |
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271 | } |
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272 | } |
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273 | |
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274 | |
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275 | int t1=0; int t2=0; |
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276 | if (tree1==TREE_UNFIXED || tree2==TREE_UNFIXED) |
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277 | { |
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278 | do |
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279 | // pick random trees -- their GPTreeConstraints must be the same |
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280 | { |
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281 | if (tree1==TREE_UNFIXED) |
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282 | if (i.trees.length > 1) |
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283 | t1 = state.random[thread].nextInt(i.trees.length); |
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284 | else t1 = 0; |
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285 | else t1 = tree1; |
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286 | |
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287 | if (tree2==TREE_UNFIXED) |
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288 | if (i.trees.length > 1) |
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289 | t2 = state.random[thread].nextInt(i.trees.length); |
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290 | else t2 = 0; |
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291 | else t2 = tree2; |
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292 | } while (i.trees[t1].constraints(initializer) != i.trees[t2].constraints(initializer)); |
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293 | } |
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294 | else |
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295 | { |
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296 | t1 = tree1; |
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297 | t2 = tree2; |
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298 | // make sure the constraints are okay |
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299 | if (i.trees[t1].constraints(initializer) |
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300 | != i.trees[t2].constraints(initializer)) // uh oh |
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301 | state.output.fatal("GP Crossover Pipeline's two tree choices are both specified by the user -- but their GPTreeConstraints are not the same"); |
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302 | } |
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303 | |
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304 | |
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305 | // prepare the nodeselectors |
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306 | nodeselect0.reset(); |
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307 | nodeselect1.reset(); |
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308 | |
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309 | |
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310 | // pick some nodes |
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311 | |
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312 | GPNode p1=null; |
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313 | GPNode p2=null; |
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314 | boolean res = false; |
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315 | |
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316 | for(int x=0;x<numTries;x++) |
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317 | { |
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318 | // pick a node in individual 1 |
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319 | p1 = nodeselect0.pickNode(state,subpopulation,thread,j,j.trees[t1]); |
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320 | |
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321 | // pick a node in individual 2 |
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322 | p2 = nodeselect1.pickNode(state,subpopulation,thread,j,j.trees[t2]); |
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323 | |
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324 | // make sure they're not the same node |
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325 | res = (p1!=p2 && |
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326 | // check for containment |
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327 | (t1!=t2 || noContainment(p1,p2)) && |
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328 | // check for validity |
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329 | verifyPoints(initializer,p1,p2) && // 1 goes into 2 |
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330 | verifyPoints(initializer,p2,p1)); // 2 goes into 1 |
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331 | if (res) break; // got one |
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332 | } |
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333 | |
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334 | // if res, then it's time to cross over! |
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335 | if (res) |
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336 | { |
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337 | GPNodeParent oldparent = p1.parent; |
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338 | byte oldargposition = p1.argposition; |
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339 | p1.parent = p2.parent; |
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340 | p1.argposition = p2.argposition; |
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341 | p2.parent = oldparent; |
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342 | p2.argposition = oldargposition; |
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343 | |
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344 | if (p1.parent instanceof GPNode) |
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345 | ((GPNode)(p1.parent)).children[p1.argposition] = p1; |
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346 | else ((GPTree)(p1.parent)).child = p1; |
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347 | |
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348 | if (p2.parent instanceof GPNode) |
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349 | ((GPNode)(p2.parent)).children[p2.argposition] = p2; |
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350 | else ((GPTree)(p2.parent)).child = p2; |
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351 | |
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352 | j.evaluated = false; // we've modified it |
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353 | } |
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354 | |
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355 | // add the individuals to the population |
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356 | inds[q] = j; |
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357 | } |
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358 | return n; |
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359 | } |
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360 | |
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361 | } |
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