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source: branches/OKBJavaConnector/ECJClient/src/ec/Fitness.java @ 10207

Last change on this file since 10207 was 6152, checked in by bfarka, 14 years ago

added ecj and custom statistics to communicate with the okb services #1441

File size: 9.9 KB
Line 
1/*
2  Copyright 2006 by Sean Luke
3  Licensed under the Academic Free License version 3.0
4  See the file "LICENSE" for more information
5*/
6
7
8package ec;
9import java.io.*;
10import ec.util.*;
11
12/*
13 * Fitness.java
14 *
15 * Created: Tue Aug 10 20:10:42 1999
16 * By: Sean Luke
17 */
18
19/**
20 * Fitness is a prototype which describes the fitness of an individual.
21 * Every individual contains exactly one Fitness object.
22 * Fitness objects are compared to each other with the equivalentTo()
23 * and betterThan(), etc. methods.
24 *
25 <p>Rules:
26 <table>
27 <tr><td><b>comparison</b></td><td><b>method</b></td></tr>
28 <tr><td>a &gt; b</td><td>a.betterThan(b)</td>
29 <tr><td>a &gt;= b</td><td>a.betterThan(b) || a.equivalentTo(b)</td>
30 <tr><td>a = b</td><td>a.equivalentTo(b)</td>
31 </table>
32
33 This applies even to multiobjective pareto-style dominance, eg:
34 <ul>
35 <li> a dominates b :: a &gt; b
36 <li> a and b do not dominate each other :: a = b
37 <li> b dominates a :: a &lt; b
38 </ul>
39
40 <p><b>Parameter bases</b><br>
41 <table>
42
43 <tr><td valign=top><tt>fit</tt></td>
44 <td>default fitness base</td></tr>
45 </table>
46
47 * @author Sean Luke
48 * @version 1.0
49 */
50
51
52public abstract class Fitness implements Prototype, Comparable
53    {
54    /** Auxiliary variable, used by coevolutionary processes, to compute the
55        number of trials used to compute this Fitness value.  By default trials=1. */
56    public int trials = 1;
57       
58    /** base parameter for defaults */
59    public static final String P_FITNESS = "fitness";
60
61    /** Basic preamble for printing Fitness values out */
62    public static final String FITNESS_PREAMBLE = "Fitness: ";
63
64    /** Should return an absolute fitness value ranging from negative
65        infinity to infinity, NOT inclusive (thus infinity, negative
66        infinity, and NaN are NOT valid fitness values).  This should
67        be interpreted as: negative infinity is worse than the WORST
68        possible fitness, and positive infinity is better than the IDEAL
69        fitness.
70       
71        <p>You are free to restrict this range any way you like: for example,
72        your fitness values might fall in the range [-5.32, 2.3]
73       
74        <p>Selection methods relying on fitness proportionate information will
75        <b>assume the fitness is non-negative</b> and should throw an error
76        if it is not.  Thus if you plan on using FitProportionateSelection,
77        BestSelection, or
78        GreedyOverselection, for example, your fitnesses should assume that 0
79        is the worst fitness and positive fitness are better.  If you're using
80        other selection methods (Tournament selection, various ES selection
81        procedures, etc.) your fitness values can be anything.
82       
83        <p>Similarly, if you're writing a selection method and it needs positive
84        fitnesses, you should check for negative values and issue an error; and
85        if your selection method doesn't need an <i>absolute</i> fitness
86        value, it should use the equivalentTo() and betterThan() methods instead.
87       
88        <p> If your fitness scheme does not use a metric quantifiable to
89        a single positive value (for example, MultiObjectiveFitness), you should
90        perform some reasonable translation.
91    */
92    public abstract float fitness();
93
94    /** Should return true if this is a good enough fitness to end the run */
95    public abstract boolean isIdealFitness();
96
97    /** Should return true if this fitness is in the same equivalence class
98        as _fitness, that is, neither is clearly better or worse than the
99        other.  You may assume that _fitness is of the same class as yourself.
100        For any two fitnesses fit1 and fit2 of the same class,
101        it must be the case that fit1.equivalentTo(fit2) == fit2.equivalentTo(fit1),
102        and that only one of fit1.betterThan(fit2), fit1.equivalentTo(fit2),
103        and fit2.betterThan(fit1) can be true.
104    */
105    public abstract boolean equivalentTo(Fitness _fitness);
106   
107    /** Should return true if this fitness is clearly better than _fitness;
108        You may assume that _fitness is of the same class as yourself.
109        For any two fitnesses fit1 and fit2 of the same class,
110        it must be the case that fit1.equivalentTo(fit2) == fit2.equivalentTo(fit1),
111        and that only one of fit1.betterThan(fit2), fit1.equivalentTo(fit2),
112        and fit2.betterThan(fit1) can be true.
113    */
114    public abstract boolean betterThan(Fitness _fitness);
115
116    /** Should print the fitness out fashion pleasing for humans to read,
117        with a verbosity of Output.V_NO_GENERAL.
118    */
119    public void printFitnessForHumans(EvolutionState state, int log)
120        {
121        printFitnessForHumans( state, log, Output.V_NO_GENERAL);
122        }
123
124    /** Should print the fitness out fashion pleasing for humans to read,
125        using state.output.println(...,verbosity,log).  The default version
126        of this method calls fitnessToStringForHumans() and println's the
127        resultant string.
128        @deprecated Verbosity no longer has meaning
129    */
130    public void printFitnessForHumans(EvolutionState state, int log,
131        int verbosity)
132        {
133        state.output.println( fitnessToStringForHumans(), verbosity, log);
134        }
135
136    /** Should print the fitness out in a computer-readable fashion,
137        with a verbosity of Output.V_NO_GENERAL.
138    */
139    public void printFitness(EvolutionState state, int log)
140        {
141        printFitness( state, log, Output.V_NO_GENERAL);
142        }
143
144    /** Should print the fitness out in a computer-readable fashion,
145        using state.output.println(...,verbosity,log).  You might use
146        ec.util.Code to encode fitness values.  The default version
147        of this method calls fitnessToString() and println's the
148        resultant string.
149        @deprecated Verbosity no longer has meaning
150    */
151    public void printFitness(EvolutionState state, int log,
152        int verbosity)
153        {
154        state.output.println( fitnessToString(), verbosity, log);
155        }
156   
157    /** Should print the fitness out in a computer-readable fashion,
158        using writer.println(...).  You might use
159        ec.util.Code to encode fitness values.  The default version
160        of this method calls fitnessToString() and println's the
161        resultant string.
162    */
163    public void printFitness(final EvolutionState state,
164        final PrintWriter writer)
165        {
166        writer.println( fitnessToString() );
167        }
168
169    /** Reads in the fitness from a form outputted by fitnessToString() and thus
170        printFitnessForHumans(...).  The default version of this method
171        exits the program with an "unimplemented" error. */
172    public void readFitness(final EvolutionState state,
173        final LineNumberReader reader)
174        throws IOException
175        {
176        state.output.fatal("readFitness(EvolutionState, DataOutput)  not implemented in " + this.getClass());
177        }
178       
179    /** Print to a string the fitness in a fashion readable by humans, and not intended
180        to be parsed in again.  The default form
181        simply calls toString(), but you'll probably want to override this to something else. */
182    public String fitnessToStringForHumans()
183        {
184        return toString();
185        }
186       
187    /** Print to a string the fitness in a fashion intended
188        to be parsed in again via readFitness(...).
189        The fitness and evaluated flag should not be included.  The default form
190        simply calls toString(), which is almost certainly wrong,
191        and you'll probably want to override this to something else. */
192    public String fitnessToString()
193        {
194        return toString();
195        }
196       
197    /** Writes the binary form of an individual out to a DataOutput.  This is not for serialization:
198        the object should only write out the data relevant to the object sufficient to rebuild it from a DataInput.
199        The default version exits the program with an "unimplemented" error; you should override this.
200    */
201    public void writeFitness(final EvolutionState state,
202        final DataOutput dataOutput) throws IOException
203        {
204        state.output.fatal("writeFitness(EvolutionState, DataOutput) not implemented in " + this.getClass());
205        }
206
207
208    /** Reads the binary form of an individual from a DataInput.  This is not for serialization:
209        the object should only read in the data written out via printIndividual(state,dataInput). 
210        The default version exits the program with an "unimplemented" error; you should override this.
211    */
212    public void readFitness(final EvolutionState state,
213        final DataInput dataInput) throws IOException
214        {
215        state.output.fatal("readFitness(EvolutionState, DataOutput) not implemented in " + this.getClass());
216        }
217
218    public Object clone()
219        {
220        try { return super.clone(); }
221        catch (CloneNotSupportedException e)
222            { throw new InternalError(); } // never happens
223        }
224
225    public void setup(EvolutionState state, Parameter base)
226        {
227        // by default does nothing
228        }
229
230    /**
231       Returns -1 if I am FITTER than the other Fitness, 1 if I am LESS FIT than the other Fitness,
232       and 0 if we are equivalent.
233    */
234    public int compareTo(Object o)
235        {
236        Fitness other = (Fitness) o;
237        if (this.betterThan(other)) return -1;
238        if (other.betterThan(this)) return 1;
239        return 0;
240        }
241       
242    /** Sets the fitness to be the same value as the mean of the provided fitnesses.  The default
243        version of this method exits with an "unimplemented" error; you should override this. */
244    public void setToMeanOf(EvolutionState state, Fitness[] fitnesses)
245        {
246        state.output.fatal("setToMeanOf(EvolutionState, Fitness[]) not implemented in " + this.getClass());
247        }
248    }
249
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