[6978] | 1 | #region License Information
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| 2 | /* HeuristicLab
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[11205] | 3 | * Copyright (C) 2002-2014 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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[6978] | 4 | *
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| 5 | * This file is part of HeuristicLab.
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| 6 | *
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| 7 | * HeuristicLab is free software: you can redistribute it and/or modify
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| 8 | * it under the terms of the GNU General Public License as published by
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| 9 | * the Free Software Foundation, either version 3 of the License, or
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| 10 | * (at your option) any later version.
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| 11 | *
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| 12 | * HeuristicLab is distributed in the hope that it will be useful,
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| 13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 15 | * GNU General Public License for more details.
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| 16 | *
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| 17 | * You should have received a copy of the GNU General Public License
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| 18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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| 19 | */
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| 20 | #endregion
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| 21 |
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[7227] | 22 | using System;
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[6978] | 23 | using System.Linq;
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| 24 | using HeuristicLab.Analysis;
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| 25 | using HeuristicLab.Common;
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| 26 | using HeuristicLab.Core;
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| 27 | using HeuristicLab.Data;
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| 28 | using HeuristicLab.Operators;
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| 29 | using HeuristicLab.Optimization;
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| 30 | using HeuristicLab.Parameters;
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| 31 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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| 32 |
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| 33 | namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
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| 34 | /// <summary>
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| 35 | /// An operator that tracks tree lengths of Symbolic Expression Trees
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| 36 | /// </summary>
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| 37 | [Item("SymbolicExpressionTreeLengthAnalyzer", "An operator that tracks tree lengths of Symbolic Expression Trees")]
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| 38 | [StorableClass]
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[7230] | 39 | public sealed class SymbolicExpressionTreeLengthAnalyzer : SingleSuccessorOperator, ISymbolicExpressionTreeAnalyzer {
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[6978] | 40 | private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
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| 41 | private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
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| 42 | private const string SymbolicExpressionTreeLengthsParameterName = "SymbolicExpressionTreeLengthsTable";
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| 43 | private const string SymbolicExpressionTreeLengthsHistoryParameterName = "SymbolicExpressionTreeLengthsHistoryTable";
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| 44 | private const string ResultsParameterName = "Results";
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| 45 | private const string StoreHistoryParameterName = "StoreHistory";
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| 46 | private const string UpdateIntervalParameterName = "UpdateInterval";
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| 47 | private const string UpdateCounterParameterName = "UpdateCounter";
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| 48 |
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| 49 | #region Parameter properties
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| 50 | public IScopeTreeLookupParameter<ISymbolicExpressionTree> SymbolicExpressionTreeParameter {
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| 51 | get { return (IScopeTreeLookupParameter<ISymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
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| 52 | }
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| 53 | public ValueLookupParameter<DataTable> SymbolicExpressionTreeLengthsParameter {
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[7124] | 54 | get { return (ValueLookupParameter<DataTable>)Parameters[SymbolicExpressionTreeLengthsParameterName]; }
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[6978] | 55 | }
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| 56 | public ValueLookupParameter<DataTableHistory> SymbolicExpressionTreeLengthsHistoryParameter {
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[7124] | 57 | get { return (ValueLookupParameter<DataTableHistory>)Parameters[SymbolicExpressionTreeLengthsHistoryParameterName]; }
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[6978] | 58 | }
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| 59 | public ValueLookupParameter<ResultCollection> ResultsParameter {
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| 60 | get { return (ValueLookupParameter<ResultCollection>)Parameters[ResultsParameterName]; }
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| 61 | }
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| 62 | // history
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| 63 | public ValueParameter<BoolValue> StoreHistoryParameter {
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| 64 | get { return (ValueParameter<BoolValue>)Parameters[StoreHistoryParameterName]; }
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| 65 | }
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| 66 | public ValueParameter<IntValue> UpdateIntervalParameter {
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| 67 | get { return (ValueParameter<IntValue>)Parameters[UpdateIntervalParameterName]; }
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| 68 | }
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[7143] | 69 | public ValueParameter<IntValue> UpdateCounterParameter {
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| 70 | get { return (ValueParameter<IntValue>)Parameters[UpdateCounterParameterName]; }
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[6978] | 71 | }
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| 72 | #endregion
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[7124] | 73 |
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[7143] | 74 | #region Properties
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[7172] | 75 | public bool EnabledByDefault {
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| 76 | get { return true; }
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| 77 | }
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[7143] | 78 | public IntValue UpdateInterval {
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| 79 | get { return UpdateIntervalParameter.Value; }
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| 80 | }
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| 81 | public IntValue UpdateCounter {
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| 82 | get { return UpdateCounterParameter.Value; }
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| 83 | }
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| 84 | public BoolValue StoreHistory {
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| 85 | get { return StoreHistoryParameter.Value; }
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| 86 | }
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| 87 | #endregion
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| 88 |
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[6978] | 89 | [StorableConstructor]
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[8561] | 90 | private SymbolicExpressionTreeLengthAnalyzer(bool deserializing) : base(deserializing) { }
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[6978] | 91 | private SymbolicExpressionTreeLengthAnalyzer(SymbolicExpressionTreeLengthAnalyzer original, Cloner cloner)
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| 92 | : base(original, cloner) {
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| 93 | }
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| 94 | public override IDeepCloneable Clone(Cloner cloner) {
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| 95 | return new SymbolicExpressionTreeLengthAnalyzer(this, cloner);
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| 96 | }
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| 97 | public SymbolicExpressionTreeLengthAnalyzer()
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| 98 | : base() {
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| 99 | Parameters.Add(new ScopeTreeLookupParameter<ISymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The symbolic expression tree whose length should be calculated."));
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| 100 | Parameters.Add(new LookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "The maximum allowed symbolic expression tree length"));
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| 101 | Parameters.Add(new ValueLookupParameter<DataTable>(SymbolicExpressionTreeLengthsParameterName, "The data table to store the symbolic expression tree lengths."));
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| 102 | Parameters.Add(new ValueLookupParameter<DataTableHistory>(SymbolicExpressionTreeLengthsHistoryParameterName, "The data table to store the symbolic expression tree lengths history."));
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| 103 | Parameters.Add(new ValueLookupParameter<ResultCollection>(ResultsParameterName, "The results collection where the analysis values should be stored."));
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| 104 | Parameters.Add(new ValueParameter<BoolValue>(StoreHistoryParameterName, "True if the tree lengths history of the population should be stored.", new BoolValue(false)));
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| 105 | Parameters.Add(new ValueParameter<IntValue>(UpdateIntervalParameterName, "The interval in which the tree length analysis should be applied.", new IntValue(1)));
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[7143] | 106 | Parameters.Add(new ValueParameter<IntValue>(UpdateCounterParameterName, "The value which counts how many times the operator was called since the last update", new IntValue(0)));
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[6978] | 107 |
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[7227] | 108 | SymbolicExpressionTreeLengthsParameter.Hidden = true;
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| 109 | SymbolicExpressionTreeLengthsHistoryParameter.Hidden = true;
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| 110 | ResultsParameter.Hidden = true;
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| 111 | UpdateCounterParameter.Hidden = true;
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[6978] | 112 | }
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| 113 |
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| 114 | [StorableHook(HookType.AfterDeserialization)]
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| 115 | private void AfterDeserialization() {
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| 116 | // check if all the parameters are present and accounted for
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| 117 | if (!Parameters.ContainsKey(StoreHistoryParameterName)) {
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| 118 | Parameters.Add(new ValueParameter<BoolValue>(StoreHistoryParameterName, "True if the tree lengths history of the population should be stored.", new BoolValue(false)));
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| 119 | }
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| 120 | if (!Parameters.ContainsKey(UpdateIntervalParameterName)) {
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| 121 | Parameters.Add(new ValueParameter<IntValue>(UpdateIntervalParameterName, "The interval in which the tree length analysis should be applied.", new IntValue(1)));
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| 122 | }
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[7280] | 123 | //necessary code to correct UpdateCounterParameter - type was changed from LookupParameter to ValueParameter
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| 124 | if (Parameters.ContainsKey(UpdateCounterParameterName) && (Parameters[UpdateCounterParameterName] is LookupParameter<IntValue>))
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| 125 | Parameters.Remove(UpdateCounterParameterName);
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[7227] | 126 | if (!Parameters.ContainsKey(UpdateCounterParameterName)) {
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| 127 | Parameters.Add(new ValueParameter<IntValue>(UpdateCounterParameterName, "The value which counts how many times the operator was called since the last update", new IntValue(0)));
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| 128 | UpdateCounterParameter.Hidden = true;
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| 129 | }
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| 130 | }
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[7150] | 131 |
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[7227] | 132 | #region IStatefulItem members
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[7230] | 133 | public override void InitializeState() {
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| 134 | base.InitializeState();
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[7227] | 135 | UpdateCounter.Value = 0;
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[6978] | 136 | }
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[7230] | 137 | public override void ClearState() {
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| 138 | base.ClearState();
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[7227] | 139 | UpdateCounter.Value = 0;
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| 140 | }
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| 141 | #endregion
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[6978] | 142 |
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| 143 | public override IOperation Apply() {
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[7143] | 144 | UpdateCounter.Value++;
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[6978] | 145 | // the analyzer runs periodically, every 'updateInterval' times
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[7143] | 146 | if (UpdateCounter.Value == UpdateInterval.Value) {
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| 147 | UpdateCounter.Value = 0; // reset counter
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[6978] | 148 |
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| 149 | // compute all tree lengths and store them in the lengthsTable
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| 150 | var solutions = SymbolicExpressionTreeParameter.ActualValue;
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| 151 |
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| 152 | var treeLengthsTable = SymbolicExpressionTreeLengthsParameter.ActualValue;
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| 153 | // if the table was not created yet, we create it here
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| 154 | if (treeLengthsTable == null) {
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[7702] | 155 | treeLengthsTable = new DataTable("Tree Length Histogram");
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[6978] | 156 | SymbolicExpressionTreeLengthsParameter.ActualValue = treeLengthsTable;
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| 157 | }
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| 158 |
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| 159 | // data table which stores tree length values
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[7124] | 160 | DataRow treeLengthsTableRow;
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[6978] | 161 |
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[7124] | 162 | const string treeLengthsTableRowName = "Symbolic expression tree lengths";
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| 163 | const string treeLengthsTableRowDesc = "The distribution of symbolic expression tree lengths";
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| 164 | const string xAxisTitle = "Symbolic expression tree lengths";
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| 165 | const string yAxisTitle = "Frequency / Number of tree individuals";
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| 166 |
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[7147] | 167 | var treeLengths = solutions.Select(s => (int)s.Length).ToList();
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[6978] | 168 |
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[7147] | 169 | int maxLength = treeLengths.Max(t => t);
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| 170 | int minLength = treeLengths.Min(t => t);
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| 171 |
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[7124] | 172 | if (!treeLengthsTable.Rows.ContainsKey(treeLengthsTableRowName)) {
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[7147] | 173 | treeLengthsTableRow = new DataRow(treeLengthsTableRowName, treeLengthsTableRowDesc, treeLengths.Select(x => (double)x));
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[7124] | 174 | treeLengthsTable.Rows.Add(treeLengthsTableRow);
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[6978] | 175 | } else {
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[7124] | 176 | treeLengthsTableRow = treeLengthsTable.Rows[treeLengthsTableRowName];
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[7147] | 177 | treeLengthsTableRow.Values.Replace(treeLengths.Select(x => (double)x));
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[6978] | 178 | }
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| 179 |
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| 180 | double maximumAllowedTreeLength = ((LookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]).ActualValue.Value;
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| 181 |
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[7124] | 182 | treeLengthsTableRow.VisualProperties.ChartType = DataRowVisualProperties.DataRowChartType.Histogram;
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| 183 | treeLengthsTableRow.VisualProperties.ExactBins = false;
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[6978] | 184 |
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[7147] | 185 | int range = maxLength - minLength;
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| 186 | if (range == 0) range = 1;
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[7124] | 187 | // the following trick should result in an integer intervalWidth of 1,2,4,...
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[7147] | 188 | treeLengthsTableRow.VisualProperties.Bins = range;
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[6978] | 189 |
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[7124] | 190 | if (maxLength <= 25) // [0,25]
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| 191 | treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0;
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[7147] | 192 | else if (maxLength <= 100) // [26,100]
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[7124] | 193 | treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 2.0;
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[7147] | 194 | else if (maxLength <= 250) // [101,250]
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[7124] | 195 | treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 5.0;
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[6978] | 196 | else if (maxLength <= 500) // [251,500]
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[7124] | 197 | treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 10.0;
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[6978] | 198 | else
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[7124] | 199 | treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 20.0; // [501,inf]
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[6978] | 200 |
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[7124] | 201 | treeLengthsTableRow.VisualProperties.IsVisibleInLegend = false;
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| 202 |
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[6978] | 203 | // visual properties for the X-axis
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| 204 | treeLengthsTable.VisualProperties.XAxisMinimumAuto = false;
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| 205 | treeLengthsTable.VisualProperties.XAxisMaximumAuto = false;
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| 206 | treeLengthsTable.VisualProperties.XAxisMinimumFixedValue = 0.0;
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| 207 | if (maxLength > maximumAllowedTreeLength + 1)
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[7124] | 208 | treeLengthsTable.VisualProperties.XAxisMaximumFixedValue = maxLength + 1; // +1 so the histogram column for the maximum length won't get trimmed
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[6978] | 209 | else
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| 210 | treeLengthsTable.VisualProperties.XAxisMaximumFixedValue = maximumAllowedTreeLength + 1;
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[7124] | 211 | treeLengthsTable.VisualProperties.XAxisTitle = xAxisTitle;
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[7147] | 212 | //visual properties for the Y-axis
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[6978] | 213 | treeLengthsTable.VisualProperties.YAxisMinimumAuto = false;
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| 214 | treeLengthsTable.VisualProperties.YAxisMaximumAuto = false;
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| 215 | treeLengthsTable.VisualProperties.YAxisMinimumFixedValue = 0.0;
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[7223] | 216 | int maxFreq = (int)Math.Round(solutions.GroupBy(s => s.Length).Max(g => g.Count()) / treeLengthsTableRow.VisualProperties.ScaleFactor);
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[7150] | 217 | if (maxFreq % 5 != 0)
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| 218 | maxFreq += (5 - maxFreq % 5);
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| 219 | double yAxisMaximumFixedValue = maxFreq;
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[7147] | 220 |
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| 221 | treeLengthsTable.VisualProperties.YAxisMaximumFixedValue = yAxisMaximumFixedValue;
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[7124] | 222 | treeLengthsTable.VisualProperties.YAxisTitle = yAxisTitle;
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[6978] | 223 |
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| 224 | var results = ResultsParameter.ActualValue;
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| 225 |
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[7124] | 226 | if (!results.ContainsKey(treeLengthsTableRowName)) {
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| 227 | results.Add(new Result(treeLengthsTableRowName, treeLengthsTable));
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[6978] | 228 | } else {
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[7124] | 229 | results[treeLengthsTableRowName].Value = treeLengthsTable;
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[6978] | 230 | }
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| 231 |
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| 232 | bool storeHistory = StoreHistoryParameter.Value.Value;
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[7124] | 233 | const string treeLengthHistoryTableName = "Tree lengths history";
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[6978] | 234 |
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| 235 | if (storeHistory) {
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| 236 | var treeLengthsHistory = SymbolicExpressionTreeLengthsHistoryParameter.ActualValue;
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| 237 | if (treeLengthsHistory == null) {
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| 238 | treeLengthsHistory = new DataTableHistory();
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| 239 | SymbolicExpressionTreeLengthsHistoryParameter.ActualValue = treeLengthsHistory;
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| 240 | }
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[7227] | 241 | treeLengthsHistory.Add((DataTable)treeLengthsTable.Clone());
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[6978] | 242 |
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[7124] | 243 | if (!results.ContainsKey(treeLengthHistoryTableName)) {
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| 244 | results.Add(new Result(treeLengthHistoryTableName, treeLengthsHistory));
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[6978] | 245 | } else {
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[7124] | 246 | results[treeLengthHistoryTableName].Value = treeLengthsHistory;
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[6978] | 247 | }
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| 248 | }
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| 249 | }
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| 250 | return base.Apply();
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| 251 | }
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| 252 | }
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| 253 | }
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