1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2012 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Collections.Generic;
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24 | using System.Linq;
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25 | using HeuristicLab.Common;
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26 | using HeuristicLab.Core;
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27 | using HeuristicLab.Data;
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28 | using HeuristicLab.Encodings.SymbolicExpressionTreeEncoding;
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29 | using HeuristicLab.Operators;
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30 | using HeuristicLab.Parameters;
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31 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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32 | using HeuristicLab.Random;
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33 |
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34 | namespace HeuristicLab.Problems.DataAnalysis.Symbolic {
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35 | [StorableClass]
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36 | public abstract class SymbolicDataAnalysisEvaluator<T> : SingleSuccessorOperator,
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37 | ISymbolicDataAnalysisEvaluator<T>, ISymbolicDataAnalysisInterpreterOperator, ISymbolicDataAnalysisBoundedOperator
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38 | where T : class, IDataAnalysisProblemData {
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39 | private const string RandomParameterName = "Random";
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40 | private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
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41 | private const string SymbolicDataAnalysisTreeInterpreterParameterName = "SymbolicExpressionTreeInterpreter";
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42 | private const string ProblemDataParameterName = "ProblemData";
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43 | private const string EstimationLimitsParameterName = "EstimationLimits";
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44 | private const string EvaluationPartitionParameterName = "EvaluationPartition";
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45 | private const string RelativeNumberOfEvaluatedSamplesParameterName = "RelativeNumberOfEvaluatedSamples";
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46 | private const string ValidRowIndicatorParameterName = "ValidRowIndicator";
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47 |
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48 | public override bool CanChangeName { get { return false; } }
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49 |
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50 | #region parameter properties
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51 | public IValueLookupParameter<IRandom> RandomParameter {
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52 | get { return (IValueLookupParameter<IRandom>)Parameters[RandomParameterName]; }
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53 | }
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54 | public ILookupParameter<ISymbolicExpressionTree> SymbolicExpressionTreeParameter {
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55 | get { return (ILookupParameter<ISymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
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56 | }
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57 | public ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter> SymbolicDataAnalysisTreeInterpreterParameter {
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58 | get { return (ILookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>)Parameters[SymbolicDataAnalysisTreeInterpreterParameterName]; }
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59 | }
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60 | public IValueLookupParameter<T> ProblemDataParameter {
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61 | get { return (IValueLookupParameter<T>)Parameters[ProblemDataParameterName]; }
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62 | }
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63 |
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64 | public IValueLookupParameter<IntRange> EvaluationPartitionParameter {
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65 | get { return (IValueLookupParameter<IntRange>)Parameters[EvaluationPartitionParameterName]; }
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66 | }
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67 | public IValueLookupParameter<DoubleLimit> EstimationLimitsParameter {
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68 | get { return (IValueLookupParameter<DoubleLimit>)Parameters[EstimationLimitsParameterName]; }
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69 | }
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70 | public IValueLookupParameter<PercentValue> RelativeNumberOfEvaluatedSamplesParameter {
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71 | get { return (IValueLookupParameter<PercentValue>)Parameters[RelativeNumberOfEvaluatedSamplesParameterName]; }
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72 | }
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73 | public IValueLookupParameter<StringValue> ValidRowIndicatorParameter {
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74 | get { return (IValueLookupParameter<StringValue>)Parameters[ValidRowIndicatorParameterName]; }
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75 | }
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76 | #endregion
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77 |
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78 |
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79 | [StorableConstructor]
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80 | protected SymbolicDataAnalysisEvaluator(bool deserializing) : base(deserializing) { }
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81 | protected SymbolicDataAnalysisEvaluator(SymbolicDataAnalysisEvaluator<T> original, Cloner cloner)
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82 | : base(original, cloner) {
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83 | }
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84 | public SymbolicDataAnalysisEvaluator()
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85 | : base() {
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86 | Parameters.Add(new ValueLookupParameter<IRandom>(RandomParameterName, "The random generator to use."));
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87 | Parameters.Add(new LookupParameter<ISymbolicDataAnalysisExpressionTreeInterpreter>(SymbolicDataAnalysisTreeInterpreterParameterName, "The interpreter that should be used to calculate the output values of the symbolic data analysis tree."));
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88 | Parameters.Add(new LookupParameter<ISymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The symbolic data analysis solution encoded as a symbolic expression tree."));
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89 | Parameters.Add(new ValueLookupParameter<T>(ProblemDataParameterName, "The problem data on which the symbolic data analysis solution should be evaluated."));
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90 | Parameters.Add(new ValueLookupParameter<IntRange>(EvaluationPartitionParameterName, "The start index of the dataset partition on which the symbolic data analysis solution should be evaluated."));
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91 | Parameters.Add(new ValueLookupParameter<DoubleLimit>(EstimationLimitsParameterName, "The upper and lower limit that should be used as cut off value for the output values of symbolic data analysis trees."));
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92 | Parameters.Add(new ValueLookupParameter<PercentValue>(RelativeNumberOfEvaluatedSamplesParameterName, "The relative number of samples of the dataset partition, which should be randomly chosen for evaluation between the start and end index."));
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93 | Parameters.Add(new ValueLookupParameter<StringValue>(ValidRowIndicatorParameterName, "An indicator variable in the data set that specifies which rows should be evaluated (those for which the indicator <> 0) (optional)."));
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94 | }
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95 |
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96 | [StorableHook(HookType.AfterDeserialization)]
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97 | private void AfterDeserialization() {
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98 | if(!Parameters.ContainsKey(ValidRowIndicatorParameterName))
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99 | Parameters.Add(new ValueLookupParameter<StringValue>(ValidRowIndicatorParameterName, "An indicator variable in the data set that specifies which rows should be evaluated (those for which the indicator <> 0) (optional)."));
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100 | }
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101 |
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102 | protected IEnumerable<int> GenerateRowsToEvaluate() {
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103 | return GenerateRowsToEvaluate(RelativeNumberOfEvaluatedSamplesParameter.ActualValue.Value);
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104 | }
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105 |
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106 | protected IEnumerable<int> GenerateRowsToEvaluate(double percentageOfRows)
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107 | {
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108 |
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109 | IEnumerable<int> rows;
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110 | int samplesStart = EvaluationPartitionParameter.ActualValue.Start;
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111 | int samplesEnd = EvaluationPartitionParameter.ActualValue.End;
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112 | int testPartitionStart = ProblemDataParameter.ActualValue.TestPartition.Start;
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113 | int testPartitionEnd = ProblemDataParameter.ActualValue.TestPartition.End;
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114 |
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115 | if (samplesEnd < samplesStart) throw new ArgumentException("Start value is larger than end value.");
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116 |
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117 | if (percentageOfRows.IsAlmost(1.0))
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118 | rows = Enumerable.Range(samplesStart, samplesEnd - samplesStart);
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119 | else {
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120 | int seed = RandomParameter.ActualValue.Next();
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121 | int count = (int)((samplesEnd - samplesStart) * percentageOfRows);
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122 | if (count == 0) count = 1;
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123 | rows = RandomEnumerable.SampleRandomNumbers(seed, samplesStart, samplesEnd, count);
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124 | }
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125 |
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126 | rows = rows.Where(i => i < testPartitionStart || testPartitionEnd <= i);
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127 |
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128 | if(ValidRowIndicatorParameter.ActualValue != null)
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129 | {
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130 | string indicatorVar = ValidRowIndicatorParameter.ActualValue.Value;
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131 | var problemData = ProblemDataParameter.ActualValue;
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132 | var indicatorRow = problemData.Dataset.GetReadOnlyDoubleValues(indicatorVar);
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133 | rows = rows.Where(r=>!indicatorRow[r].IsAlmost(0.0));
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134 | }
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135 | return rows;
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136 | }
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137 | }
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138 | }
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