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source: branches/HeuristicLab.Problems.GaussianProcessTuning/ILNumerics.2.14.4735.573/Misc/ILMatFile5.cs @ 12732

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Last change on this file since 12732 was 9102, checked in by gkronber, 12 years ago
#1967: ILNumerics source for experimentation
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1	///
2	/// This file is part of ILNumerics Community Edition.
3	///
4	/// ILNumerics Community Edition - high performance computing for applications.
5	/// Copyright (C) 2006 - 2012 Haymo Kutschbach, http://ilnumerics.net
6	///
7	/// ILNumerics Community Edition is free software: you can redistribute it and/or modify
8	/// it under the terms of the GNU General Public License version 3 as published by
9	/// the Free Software Foundation.
10	///
11	/// ILNumerics Community Edition is distributed in the hope that it will be useful,
12	/// but WITHOUT ANY WARRANTY; without even the implied warranty of
13	/// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14	/// GNU General Public License for more details.
15	///
16	/// You should have received a copy of the GNU General Public License
17	/// along with ILNumerics Community Edition. See the file License.txt in the root
18	/// of your distribution package. If not, see <http://www.gnu.org/licenses/>.
19	///
20	/// In addition this software uses the following components and/or licenses:
21	///
22	/// =================================================================================
23	/// The Open Toolkit Library License
24	///
25	/// Copyright (c) 2006 - 2009 the Open Toolkit library.
26	///
27	/// Permission is hereby granted, free of charge, to any person obtaining a copy
28	/// of this software and associated documentation files (the "Software"), to deal
29	/// in the Software without restriction, including without limitation the rights to
30	/// use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of
31	/// the Software, and to permit persons to whom the Software is furnished to do
32	/// so, subject to the following conditions:
33	///
34	/// The above copyright notice and this permission notice shall be included in all
35	/// copies or substantial portions of the Software.
36	///
37	/// =================================================================================
38	///
39
40	using System;
41	using System.Collections.Generic;
42	using System.Text;
43	using System.IO;
44	using System.IO.Compression;
45	using ILNumerics;
46	using ILNumerics.Storage;
47	using ILNumerics.Misc;
48	using ILNumerics.Exceptions;
49
50
51	namespace ILNumerics {
52
53	/// <summary>
54	/// Matlab .mat file wrapper class
55	/// </summary>
56	/// <remarks>This class reads and writes Matlab .mat files version 6! !
57	/// All numeric array types are supported. The reading and writing of
58	/// Matlab cell arrays is not supported yet.</remarks>
59	public sealed class ILMatFile : IDisposable {
60
61	#region attributes
62	[System.Diagnostics.DebuggerBrowsable(System.Diagnostics.DebuggerBrowsableState.Never)]
63	private string m_filename = "(unknown)";
64	/// <summary>
65	/// Path to mat file, if this object was created from an existing mat file.
66	/// </summary>
67	public string Filelocation {
68	get {
69	return m_filename;
70	}
71	}
72	[System.Diagnostics.DebuggerBrowsable(System.Diagnostics.DebuggerBrowsableState.Never)]
73	private ILCell m_data = ILMath.cell();
74	[System.Diagnostics.DebuggerBrowsable(System.Diagnostics.DebuggerBrowsableState.Never)]
75	private string headerFromFile;
76	#endregion
77
78	#region constants
79	/// <summary>
80	/// Inner types for MATLAB data elements
81	/// </summary>
82	public enum MatFileType : int {
83	/// <summary>
84	/// unknown
85	/// </summary>
86	miUNKNOWN = 0,
87	/// <summary>
88	/// Int8
89	/// </summary>
90	miINT8 = 1,
91	/// <summary>
92	/// UInt8
93	/// </summary>
94	miUINT8 = 2,
95	/// <summary>
96	/// Int16
97	/// </summary>
98	miINT16 = 3,
99	/// <summary>
100	/// UInt16
101	/// </summary>
102	miUINT16 = 4,
103	/// <summary>
104	/// int32
105	/// </summary>
106	miINT32 = 5,
107	/// <summary>
108	/// UInt32
109	/// </summary>
110	miUINT32 = 6,
111	/// <summary>
112	/// float
113	/// </summary>
114	miSINGLE = 7,
115	/// <summary>
116	/// double
117	/// </summary>
118	miDOUBLE = 9,
119	/// <summary>
120	/// Int64
121	/// </summary>
122	miINT64 = 12,
123	/// <summary>
124	/// UInt64
125	/// </summary>
126	miUINT64 = 13,
127	/// <summary>
128	/// matrix type (general)
129	/// </summary>
130	miMATRIX = 14,
131	/// <summary>
132	/// compressed
133	/// </summary>
134	miCOMPRESSED = 15,
135	/// <summary>
136	/// utf8 encoded
137	/// </summary>
138	miUTF8 = 16,
139	/// <summary>
140	/// utf16 encoded
141	/// </summary>
142	miUTF16 = 17,
143	/// <summary>
144	/// utf32 encoded
145	/// </summary>
146	miUTF32 = 18
147	}
148	/// <summary>
149	/// Types for matrix chunks
150	/// </summary>
151	public enum MatFileArrayClass {
152	/// <summary>
153	/// cell
154	/// </summary>
155	mxCELL_CLASS = 1,
156	/// <summary>
157	/// struct
158	/// </summary>
159	mxSTRUCT_CLASS = 2,
160	/// <summary>
161	/// object
162	/// </summary>
163	mxOBJECT_CLASS = 3,
164	/// <summary>
165	/// char
166	/// </summary>
167	mxCHAR_CLASS = 4,
168	/// <summary>
169	/// sparse
170	/// </summary>
171	mxSPARSE_CLASS = 5,
172	/// <summary>
173	/// double
174	/// </summary>
175	mxDOUBLE_CLASS = 6,
176	/// <summary>
177	/// float
178	/// </summary>
179	mxSINGLE_CLASS = 7,
180	/// <summary>
181	/// Int8
182	/// </summary>
183	mxINT8_CLASS = 8,
184	/// <summary>
185	/// UInt8
186	/// </summary>
187	mxUINT8_CLASS = 9,
188	/// <summary>
189	/// Int16
190	/// </summary>
191	mxINT16_CLASS = 10,
192	/// <summary>
193	/// UInt16
194	/// </summary>
195	mxUINT16_CLASS = 11,
196	/// <summary>
197	/// Int32
198	/// </summary>
199	mxINT32_CLASS = 12,
200	/// <summary>
201	/// UInt32
202	/// </summary>
203	mxUINT32_CLASS = 13,
204	/// <summary>
205	/// Int32
206	/// </summary>
207	mxINT64_CLASS = 14,
208	/// <summary>
209	/// UInt32
210	/// </summary>
211	mxUINT64_CLASS = 15
212	}
213
214	/// <summary>
215	/// List of keywords which Matlab disallows for variable names
216	/// </summary>
217	public static readonly string[] ReservedKeywords = new string[] {
218	"break",
219	"case" ,
220	"catch" ,
221	"continue",
222	"else" ,
223	"elseif" ,
224	"end" ,
225	"for" ,
226	"function",
227	"global" ,
228	"if" ,
229	"otherwise",
230	"persistent",
231	"return" ,
232	"switch" ,
233	"try" ,
234	"while"
235	};
236
237	private static int miSIZE_INT32 = 4;
238	private static int miSIZE_INT16 = 2;
239	private static int miSIZE_INT8 = 1;
240	private static int miSIZE_UINT32 = 4;
241	private static int miSIZE_UINT16 = 2;
242	private static int miSIZE_UINT8 = 1;
243	private static int miSIZE_DOUBLE = 8;
244	private static int miSIZE_SINGLE = 4;
245	private static int miSIZE_UTF32 = 4;
246	private static int miSIZE_INT64 = 8;
247	private static int miSIZE_UINT64 = 8;
248
249
250	/* Matlab Array Types (Classes) */
251	private static int mxUNKNOWN_CLASS = 0;
252	private static int mxCELL_CLASS = 1;
253	private static int mxSTRUCT_CLASS = 2;
254	private static int mxOBJECT_CLASS = 3;
255	private static int mxCHAR_CLASS = 4;
256	private static int mxSPARSE_CLASS = 5;
257	private static int mxDOUBLE_CLASS = 6;
258	private static int mxSINGLE_CLASS = 7;
259	private static int mxINT8_CLASS = 8;
260	private static int mxUINT8_CLASS = 9;
261	private static int mxINT16_CLASS = 10;
262	private static int mxUINT16_CLASS = 11;
263	private static int mxINT32_CLASS = 12;
264	private static int mxUINT32_CLASS = 13;
265	private static int mxINT64_CLASS = 14;
266	private static int mxUINT64_CLASS = 15;
267	private static int mxFUNCTION_CLASS= 16;
268	private static int mxOPAQUE_CLASS = 17;
269
270	private static int mtFLAG_COMPLEX = 0x0800;
271	private static int mtFLAG_GLOBAL = 0x0400;
272	private static int mtFLAG_LOGICAL = 0x0200;
273	private static int mtFLAG_TYPE = 0xff;
274	#endregion
275
276	#region private helper
277	/// <summary>
278	/// size of single elements stored in Matlab's *.mat files
279	/// </summary>
280	/// <param name="type">one of Matlab's inner element types</param>
281	/// <returns>size in bytes </returns>
282	private static int sizeOf(MatFileType type)
283	{
284	switch ( type )
285	{
286	case MatFileType.miINT8:
287	return miSIZE_INT8;
288	case MatFileType.miUINT8:
289	return miSIZE_UINT8;
290	case MatFileType.miINT16:
291	return miSIZE_INT16;
292	case MatFileType.miUINT16:
293	return miSIZE_UINT16;
294	case MatFileType.miINT32:
295	return miSIZE_INT32;
296	case MatFileType.miUINT32:
297	return miSIZE_UINT32;
298	case MatFileType.miINT64:
299	return miSIZE_INT64;
300	case MatFileType.miUINT64:
301	return miSIZE_UINT64;
302	case MatFileType.miDOUBLE:
303	return miSIZE_DOUBLE;
304	case MatFileType.miSINGLE:
305	return miSIZE_SINGLE;
306	case MatFileType.miUTF32:
307	return miSIZE_UTF32;
308	default:
309	throw new ILArgumentException("Invalid MatFileType specified: " + type.ToString());
310	}
311	}
312	private ILBaseArray read_compressed(BinaryReader br, int len) {
313	throw new NotImplementedException("Compressed matfile format is not supported yet! Use '-v6' option in Matlab to create the matfile!");
314	//long startpos = br.BaseStream.Position;
315	////ZOutputStream zstream = new ZOutputStream(br.BaseStream);
316	//GZipStream str = new GZipStream(br.BaseStream,CompressionMode.Decompress);
317	//BinaryReader bread = new BinaryReader(str);
318	//MatFileType dataType = (MatFileType)Enum.Parse(typeof(MatFileType), bread.ReadInt32().ToString());
319	//int elementLength = bread.ReadInt32();
320	//ILBaseArray ret = null;
321	//if (dataType == MatFileType.miMATRIX) {
322	// ret = read_miMATRIX(bread);
323	//}
324	//return ret;
325	}
326	private void read_header(BinaryReader br) {
327	headerFromFile = br.ReadBytes(116).ToString();
328	// skip subsystem data
329	br.ReadBytes(8);
330	// version
331	int version = br.ReadInt16();
332	if (br.ReadChar() != 'I' \|\| br.ReadByte() != 'M')
333	throw new Exception("This file eventually was written on a machine, which is not compatible " +
334	" to this one due to an endian type issue!");
335	}
336	/// <summary>
337	/// read ONE array (arbitrary dimensions/type) from MAT file
338	/// </summary>
339	/// <param name="br">binary reader initialized and pointing to the beginning of the subarray element.</param>
340	/// <returns>ILBaseArray of size and type originally stored into the mat file.</returns>
341	private ILBaseArray read_miMATRIX(BinaryReader br) {
342	long entryPositionInStream = br.BaseStream.Position;
343	bool complex = false;
344	bool logical = false;
345	int mxClass = 0;
346	int[] dimensions = new int[0];
347	MatFileType storageType = MatFileType.miUNKNOWN;
348	int nrElements = 1;
349	string name;
350	ILBaseArray ret;
351	// read array flags
352	Int32 readInt = br.ReadInt32();
353	if (readInt != 6)
354	throw new Exception("found invalid datatype in array flag! currently only 'mxArray' types are supported!");
355	readInt = br.ReadInt32();
356	if (readInt != 8)
357	throw new Exception("unexpected array flag length. expected: 8 /found: " + readInt);
358	readInt = br.ReadInt32();
359	complex = (readInt & mtFLAG_COMPLEX) != 0;
360	logical = (readInt & mtFLAG_LOGICAL) != 0;
361	mxClass = readInt & 0x00ff;
362	// unknown
363	br.ReadInt32();
364	// Read dimensions array
365	readInt = br.ReadInt32();
366	if (readInt != 5)
367	throw new Exception("found invalid datatype in dimension flag!");
368	readInt = br.ReadInt32();
369	if (readInt < 2)
370	throw new Exception("Invalid number of dimensions found: " + readInt);
371	dimensions = new int[(int)readInt / 4];
372	for (int i = 0; i < dimensions.Length; i++) {
373	dimensions[i] = br.ReadInt32();
374	nrElements *= dimensions[i];
375	}
376	// padidng if needed
377	if ((dimensions.Length % 2) != 0)
378	br.ReadInt32();
379	// read Name - check for small data element format
380	readInt = br.ReadInt32();
381	int nrSmallBytes = (int)((readInt & 0xffff0000) >> 16);
382	if (nrSmallBytes != 0) {
383	// process small element format
384	if ((readInt & 0xffff) != 1)
385	throw new Exception("Invalid datype for (compressed) name element found: " + (readInt & 0x00ff));
386	StringBuilder nameBuild = new StringBuilder();
387	nameBuild.Append(br.ReadChars(nrSmallBytes));
388	// padding if needed
389	while (nrSmallBytes < 4) {
390	br.ReadByte();
391	nrSmallBytes++;
392	}
393	name = nameBuild.ToString();
394	} else {
395	// process 'long' format
396	if (readInt != 1)
397	throw new Exception("Invalid datype for name element found: " + readInt);
398	readInt = br.ReadInt32();
399	StringBuilder nameBuild = new StringBuilder();
400	nameBuild.Append(br.ReadChars(readInt));
401	while (readInt % 8 != 0) {
402	readInt++;
403	br.ReadByte();
404	}
405	name = nameBuild.ToString();
406	}
407	// read data flags + check if small format
408	readInt = br.ReadInt32();
409	nrSmallBytes = (Int16)((readInt & 0xffff0000) >> 16);
410	System.Array realData = null;
411	System.Array imagData = null;
412	int len;
413	if (nrSmallBytes != 0 && nrElements <= 4) {
414	// small data element format for scalars only!
415	// process small format -> real part
416	storageType = (MatFileType)(readInt & 0xffff);
417	len = nrSmallBytes;
418	readElementGeneric(br, storageType, out realData, ref len, 4);
419	// padding
420	//while (nrSmallBytes < 4 && br.BaseStream.Position < br.BaseStream.Length) {
421	// br.ReadByte();
422	// nrSmallBytes++;
423	//}
424	} else {
425	// read regular data : real part
426	storageType = (MatFileType)Enum.Parse(typeof(MatFileType), readInt.ToString());
427	len = br.ReadInt32();
428	nrSmallBytes = len;
429	readElementGeneric(br, storageType, out realData, ref len);
430	// (padding is done in readElementGeneric)
431	}
432
433	// read imag part + check if small format
434	if (complex) {
435	readInt = br.ReadInt32();
436	nrSmallBytes = (Int16)((readInt & 0xffff0000) >> 16);
437	if (nrSmallBytes != 0 && nrElements <= 4) {
438	// process small format -> imag part
439	storageType = (MatFileType)(readInt & 0xffff);
440	len = nrSmallBytes;
441	readElementGeneric(br, storageType, out imagData, ref len, 4);
442	// padding
443	//while (nrSmallBytes < 4 && br.BaseStream.Position < br.BaseStream.Length) {
444	// br.ReadByte();
445	// nrSmallBytes++;
446	//}
447	} else {
448	// read regular data : image part
449	storageType = (MatFileType)Enum.Parse(typeof(MatFileType), readInt.ToString()); ;
450	len = br.ReadInt32();
451	nrSmallBytes = len;
452	readElementGeneric(br, storageType, out imagData, ref len);
453	// (padding's done in readElementGeneric)
454	}
455	}
456	// convert to original data type
457	if (complex) {
458	if (mxClass == mxSINGLE_CLASS) {
459	fcomplex[] retArr = new fcomplex[nrElements];
460	float[] realPart = Convert2SingleArray(realData);
461	float[] imagPart = Convert2SingleArray(imagData);
462	for (int i = 0; i < nrElements; i++) {
463	retArr[i] = new fcomplex(realPart[i], imagPart[i]);
464	}
465	ret = new ILRetArray<fcomplex>(retArr, dimensions);
466	} else {
467	complex[] retArr = new complex[nrElements];
468	double[] realPart = Convert2DoubleArray(realData);
469	double[] imagPart = Convert2DoubleArray(imagData);
470	for (int i = 0; i < nrElements; i++) {
471	retArr[i] = new complex(realPart[i], imagPart[i]);
472	}
473	ret = new ILRetArray<complex>(retArr, dimensions);
474	}
475	} else if (logical) {
476	int numNonzero = 0;
477	byte[] retArr = Convert2Logical(realData, out numNonzero);
478	ret = new ILRetLogical(retArr, new ILSize(dimensions), numNonzero);
479	} else {
480	if (false) {
481
482
483	} else if (mxClass == mxDOUBLE_CLASS) {
484
485	double[] dataArr = Convert2DoubleArray(realData);
486	ret = new ILRetArray<double>(dataArr, dimensions);
487
488	#region HYCALPER AUTO GENERATED CODE
489
490
491	} else if (mxClass == mxUINT8_CLASS) {
492
493	byte[] dataArr = Convert2ByteArray(realData);
494	ret = new ILRetArray<byte>(dataArr, dimensions);
495
496	} else if (mxClass == mxUINT64_CLASS) {
497
498	UInt64[] dataArr = Convert2UInt64Array(realData);
499	ret = new ILRetArray<UInt64>(dataArr, dimensions);
500
501	} else if (mxClass == mxINT64_CLASS) {
502
503	Int64[] dataArr = Convert2Int64Array(realData);
504	ret = new ILRetArray<Int64>(dataArr, dimensions);
505
506	} else if (mxClass == mxUINT32_CLASS) {
507
508	UInt32[] dataArr = Convert2UInt32Array(realData);
509	ret = new ILRetArray<UInt32>(dataArr, dimensions);
510
511	} else if (mxClass == mxINT32_CLASS) {
512
513	Int32[] dataArr = Convert2Int32Array(realData);
514	ret = new ILRetArray<Int32>(dataArr, dimensions);
515
516	} else if (mxClass == mxUINT16_CLASS) {
517
518	UInt16[] dataArr = Convert2UInt16Array(realData);
519	ret = new ILRetArray<UInt16>(dataArr, dimensions);
520
521	} else if (mxClass == mxINT16_CLASS) {
522
523	Int16[] dataArr = Convert2Int16Array(realData);
524	ret = new ILRetArray<Int16>(dataArr, dimensions);
525
526	} else if (mxClass == mxUINT8_CLASS) {
527
528	char[] dataArr = Convert2CharArray(realData);
529	ret = new ILRetArray<char>(dataArr, dimensions);
530
531	} else if (mxClass == mxINT8_CLASS) {
532
533	byte[] dataArr = Convert2ByteArray(realData);
534	ret = new ILRetArray<byte>(dataArr, dimensions);
535
536	} else if (mxClass == mxSINGLE_CLASS) {
537
538	float[] dataArr = Convert2SingleArray(realData);
539	ret = new ILRetArray<float>(dataArr, dimensions);
540
541	} else if (mxClass == mxCHAR_CLASS) {
542
543	char[] dataArr = Convert2CharArray(realData);
544	ret = new ILRetArray<char>(dataArr, dimensions);
545
546	#endregion HYCALPER AUTO GENERATED CODE
547	} else {
548	throw new Exception("element data type is not supported");
549	}
550	}
551	// set name
552	ret.Name = name;
553	return ret;
554	}
555
556
557
558
559	private double[] Convert2DoubleArray(System.Array input) {
560	// keep track of type matches ! No checks will be made!
561
562	double[] ret = new double[input.Length];
563	switch (input.GetType().Name.ToLower()) {
564	case "char[]":
565	for (int i = 0; i < input.Length; i++) {
566	ret[i] = ( double)(char)input.GetValue(i);
567	}
568	break;
569
570	case "uint64[]":
571	for (int i = 0; i < input.Length; i++) {
572	ret[i] = ( double)(UInt64)input.GetValue(i);
573	}
574	break;
575
576	case "uint32[]":
577	for (int i = 0; i < input.Length; i++) {
578	ret[i] = ( double)(UInt32)input.GetValue(i);
579	}
580	break;
581
582	case "uint16[]":
583	for (int i = 0; i < input.Length; i++) {
584	ret[i] = ( double)(UInt16)input.GetValue(i);
585	}
586	break;
587
588	case "int64[]":
589	for (int i = 0; i < input.Length; i++) {
590	ret[i] = ( double)(Int64)input.GetValue(i);
591	}
592	break;
593
594	case "int32[]":
595	for (int i = 0; i < input.Length; i++) {
596	ret[i] = ( double)(Int32)input.GetValue(i);
597	}
598	break;
599
600	case "int16[]":
601	for (int i = 0; i < input.Length; i++) {
602	ret[i] = ( double)(Int16)input.GetValue(i);
603	}
604	break;
605
606	case "single[]":
607	for (int i = 0; i < input.Length; i++) {
608	ret[i] = ( double)(float)input.GetValue(i);
609	}
610	break;
611
612	case "double[]":
613	for (int i = 0; i < input.Length; i++) {
614	ret[i] = ( double)(double)input.GetValue(i);
615	}
616	break;
617
618	case "byte[]":
619	for (int i = 0; i < input.Length; i++) {
620	ret[i] = ( double)(byte)input.GetValue(i);
621	}
622	break;
623	case "sbyte[]":
624	for (int i = 0; i < input.Length; i++) {
625	ret[i] = ( double)(sbyte)input.GetValue(i);
626	}
627	break;
628	default:
629	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
630	}
631	return ret;
632	}
633
634	#region HYCALPER AUTO GENERATED CODE
635
636
637
638	private sbyte[] Convert2SByteArray(System.Array input) {
639	// keep track of type matches ! No checks will be made!
640
641	sbyte[] ret = new sbyte[input.Length];
642	switch (input.GetType().Name.ToLower()) {
643	case "char[]":
644	for (int i = 0; i < input.Length; i++) {
645	ret[i] = ( sbyte)(char)input.GetValue(i);
646	}
647	break;
648
649	case "uint64[]":
650	for (int i = 0; i < input.Length; i++) {
651	ret[i] = ( sbyte)(UInt64)input.GetValue(i);
652	}
653	break;
654
655	case "uint32[]":
656	for (int i = 0; i < input.Length; i++) {
657	ret[i] = ( sbyte)(UInt32)input.GetValue(i);
658	}
659	break;
660
661	case "uint16[]":
662	for (int i = 0; i < input.Length; i++) {
663	ret[i] = ( sbyte)(UInt16)input.GetValue(i);
664	}
665	break;
666
667	case "int64[]":
668	for (int i = 0; i < input.Length; i++) {
669	ret[i] = ( sbyte)(Int64)input.GetValue(i);
670	}
671	break;
672
673	case "int32[]":
674	for (int i = 0; i < input.Length; i++) {
675	ret[i] = ( sbyte)(Int32)input.GetValue(i);
676	}
677	break;
678
679	case "int16[]":
680	for (int i = 0; i < input.Length; i++) {
681	ret[i] = ( sbyte)(Int16)input.GetValue(i);
682	}
683	break;
684
685	case "single[]":
686	for (int i = 0; i < input.Length; i++) {
687	ret[i] = ( sbyte)(float)input.GetValue(i);
688	}
689	break;
690
691	case "double[]":
692	for (int i = 0; i < input.Length; i++) {
693	ret[i] = ( sbyte)(double)input.GetValue(i);
694	}
695	break;
696
697	case "byte[]":
698	for (int i = 0; i < input.Length; i++) {
699	ret[i] = ( sbyte)(byte)input.GetValue(i);
700	}
701	break;
702	case "sbyte[]":
703	for (int i = 0; i < input.Length; i++) {
704	ret[i] = ( sbyte)(sbyte)input.GetValue(i);
705	}
706	break;
707	default:
708	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
709	}
710	return ret;
711	}
712
713
714	private byte[] Convert2ByteArray(System.Array input) {
715	// keep track of type matches ! No checks will be made!
716
717	byte[] ret = new byte[input.Length];
718	switch (input.GetType().Name.ToLower()) {
719	case "char[]":
720	for (int i = 0; i < input.Length; i++) {
721	ret[i] = ( byte)(char)input.GetValue(i);
722	}
723	break;
724
725	case "uint64[]":
726	for (int i = 0; i < input.Length; i++) {
727	ret[i] = ( byte)(UInt64)input.GetValue(i);
728	}
729	break;
730
731	case "uint32[]":
732	for (int i = 0; i < input.Length; i++) {
733	ret[i] = ( byte)(UInt32)input.GetValue(i);
734	}
735	break;
736
737	case "uint16[]":
738	for (int i = 0; i < input.Length; i++) {
739	ret[i] = ( byte)(UInt16)input.GetValue(i);
740	}
741	break;
742
743	case "int64[]":
744	for (int i = 0; i < input.Length; i++) {
745	ret[i] = ( byte)(Int64)input.GetValue(i);
746	}
747	break;
748
749	case "int32[]":
750	for (int i = 0; i < input.Length; i++) {
751	ret[i] = ( byte)(Int32)input.GetValue(i);
752	}
753	break;
754
755	case "int16[]":
756	for (int i = 0; i < input.Length; i++) {
757	ret[i] = ( byte)(Int16)input.GetValue(i);
758	}
759	break;
760
761	case "single[]":
762	for (int i = 0; i < input.Length; i++) {
763	ret[i] = ( byte)(float)input.GetValue(i);
764	}
765	break;
766
767	case "double[]":
768	for (int i = 0; i < input.Length; i++) {
769	ret[i] = ( byte)(double)input.GetValue(i);
770	}
771	break;
772
773	case "byte[]":
774	for (int i = 0; i < input.Length; i++) {
775	ret[i] = ( byte)(byte)input.GetValue(i);
776	}
777	break;
778	case "sbyte[]":
779	for (int i = 0; i < input.Length; i++) {
780	ret[i] = ( byte)(sbyte)input.GetValue(i);
781	}
782	break;
783	default:
784	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
785	}
786	return ret;
787	}
788
789
790	private UInt64[] Convert2UInt64Array(System.Array input) {
791	// keep track of type matches ! No checks will be made!
792
793	UInt64[] ret = new UInt64[input.Length];
794	switch (input.GetType().Name.ToLower()) {
795	case "char[]":
796	for (int i = 0; i < input.Length; i++) {
797	ret[i] = ( UInt64)(char)input.GetValue(i);
798	}
799	break;
800
801	case "uint64[]":
802	for (int i = 0; i < input.Length; i++) {
803	ret[i] = ( UInt64)(UInt64)input.GetValue(i);
804	}
805	break;
806
807	case "uint32[]":
808	for (int i = 0; i < input.Length; i++) {
809	ret[i] = ( UInt64)(UInt32)input.GetValue(i);
810	}
811	break;
812
813	case "uint16[]":
814	for (int i = 0; i < input.Length; i++) {
815	ret[i] = ( UInt64)(UInt16)input.GetValue(i);
816	}
817	break;
818
819	case "int64[]":
820	for (int i = 0; i < input.Length; i++) {
821	ret[i] = ( UInt64)(Int64)input.GetValue(i);
822	}
823	break;
824
825	case "int32[]":
826	for (int i = 0; i < input.Length; i++) {
827	ret[i] = ( UInt64)(Int32)input.GetValue(i);
828	}
829	break;
830
831	case "int16[]":
832	for (int i = 0; i < input.Length; i++) {
833	ret[i] = ( UInt64)(Int16)input.GetValue(i);
834	}
835	break;
836
837	case "single[]":
838	for (int i = 0; i < input.Length; i++) {
839	ret[i] = ( UInt64)(float)input.GetValue(i);
840	}
841	break;
842
843	case "double[]":
844	for (int i = 0; i < input.Length; i++) {
845	ret[i] = ( UInt64)(double)input.GetValue(i);
846	}
847	break;
848
849	case "byte[]":
850	for (int i = 0; i < input.Length; i++) {
851	ret[i] = ( UInt64)(byte)input.GetValue(i);
852	}
853	break;
854	case "sbyte[]":
855	for (int i = 0; i < input.Length; i++) {
856	ret[i] = ( UInt64)(sbyte)input.GetValue(i);
857	}
858	break;
859	default:
860	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
861	}
862	return ret;
863	}
864
865
866	private UInt32[] Convert2UInt32Array(System.Array input) {
867	// keep track of type matches ! No checks will be made!
868
869	UInt32[] ret = new UInt32[input.Length];
870	switch (input.GetType().Name.ToLower()) {
871	case "char[]":
872	for (int i = 0; i < input.Length; i++) {
873	ret[i] = ( UInt32)(char)input.GetValue(i);
874	}
875	break;
876
877	case "uint64[]":
878	for (int i = 0; i < input.Length; i++) {
879	ret[i] = ( UInt32)(UInt64)input.GetValue(i);
880	}
881	break;
882
883	case "uint32[]":
884	for (int i = 0; i < input.Length; i++) {
885	ret[i] = ( UInt32)(UInt32)input.GetValue(i);
886	}
887	break;
888
889	case "uint16[]":
890	for (int i = 0; i < input.Length; i++) {
891	ret[i] = ( UInt32)(UInt16)input.GetValue(i);
892	}
893	break;
894
895	case "int64[]":
896	for (int i = 0; i < input.Length; i++) {
897	ret[i] = ( UInt32)(Int64)input.GetValue(i);
898	}
899	break;
900
901	case "int32[]":
902	for (int i = 0; i < input.Length; i++) {
903	ret[i] = ( UInt32)(Int32)input.GetValue(i);
904	}
905	break;
906
907	case "int16[]":
908	for (int i = 0; i < input.Length; i++) {
909	ret[i] = ( UInt32)(Int16)input.GetValue(i);
910	}
911	break;
912
913	case "single[]":
914	for (int i = 0; i < input.Length; i++) {
915	ret[i] = ( UInt32)(float)input.GetValue(i);
916	}
917	break;
918
919	case "double[]":
920	for (int i = 0; i < input.Length; i++) {
921	ret[i] = ( UInt32)(double)input.GetValue(i);
922	}
923	break;
924
925	case "byte[]":
926	for (int i = 0; i < input.Length; i++) {
927	ret[i] = ( UInt32)(byte)input.GetValue(i);
928	}
929	break;
930	case "sbyte[]":
931	for (int i = 0; i < input.Length; i++) {
932	ret[i] = ( UInt32)(sbyte)input.GetValue(i);
933	}
934	break;
935	default:
936	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
937	}
938	return ret;
939	}
940
941
942	private UInt16[] Convert2UInt16Array(System.Array input) {
943	// keep track of type matches ! No checks will be made!
944
945	UInt16[] ret = new UInt16[input.Length];
946	switch (input.GetType().Name.ToLower()) {
947	case "char[]":
948	for (int i = 0; i < input.Length; i++) {
949	ret[i] = ( UInt16)(char)input.GetValue(i);
950	}
951	break;
952
953	case "uint64[]":
954	for (int i = 0; i < input.Length; i++) {
955	ret[i] = ( UInt16)(UInt64)input.GetValue(i);
956	}
957	break;
958
959	case "uint32[]":
960	for (int i = 0; i < input.Length; i++) {
961	ret[i] = ( UInt16)(UInt32)input.GetValue(i);
962	}
963	break;
964
965	case "uint16[]":
966	for (int i = 0; i < input.Length; i++) {
967	ret[i] = ( UInt16)(UInt16)input.GetValue(i);
968	}
969	break;
970
971	case "int64[]":
972	for (int i = 0; i < input.Length; i++) {
973	ret[i] = ( UInt16)(Int64)input.GetValue(i);
974	}
975	break;
976
977	case "int32[]":
978	for (int i = 0; i < input.Length; i++) {
979	ret[i] = ( UInt16)(Int32)input.GetValue(i);
980	}
981	break;
982
983	case "int16[]":
984	for (int i = 0; i < input.Length; i++) {
985	ret[i] = ( UInt16)(Int16)input.GetValue(i);
986	}
987	break;
988
989	case "single[]":
990	for (int i = 0; i < input.Length; i++) {
991	ret[i] = ( UInt16)(float)input.GetValue(i);
992	}
993	break;
994
995	case "double[]":
996	for (int i = 0; i < input.Length; i++) {
997	ret[i] = ( UInt16)(double)input.GetValue(i);
998	}
999	break;
1000
1001	case "byte[]":
1002	for (int i = 0; i < input.Length; i++) {
1003	ret[i] = ( UInt16)(byte)input.GetValue(i);
1004	}
1005	break;
1006	case "sbyte[]":
1007	for (int i = 0; i < input.Length; i++) {
1008	ret[i] = ( UInt16)(sbyte)input.GetValue(i);
1009	}
1010	break;
1011	default:
1012	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1013	}
1014	return ret;
1015	}
1016
1017
1018	private Int64[] Convert2Int64Array(System.Array input) {
1019	// keep track of type matches ! No checks will be made!
1020
1021	Int64[] ret = new Int64[input.Length];
1022	switch (input.GetType().Name.ToLower()) {
1023	case "char[]":
1024	for (int i = 0; i < input.Length; i++) {
1025	ret[i] = ( Int64)(char)input.GetValue(i);
1026	}
1027	break;
1028
1029	case "uint64[]":
1030	for (int i = 0; i < input.Length; i++) {
1031	ret[i] = ( Int64)(UInt64)input.GetValue(i);
1032	}
1033	break;
1034
1035	case "uint32[]":
1036	for (int i = 0; i < input.Length; i++) {
1037	ret[i] = ( Int64)(UInt32)input.GetValue(i);
1038	}
1039	break;
1040
1041	case "uint16[]":
1042	for (int i = 0; i < input.Length; i++) {
1043	ret[i] = ( Int64)(UInt16)input.GetValue(i);
1044	}
1045	break;
1046
1047	case "int64[]":
1048	for (int i = 0; i < input.Length; i++) {
1049	ret[i] = ( Int64)(Int64)input.GetValue(i);
1050	}
1051	break;
1052
1053	case "int32[]":
1054	for (int i = 0; i < input.Length; i++) {
1055	ret[i] = ( Int64)(Int32)input.GetValue(i);
1056	}
1057	break;
1058
1059	case "int16[]":
1060	for (int i = 0; i < input.Length; i++) {
1061	ret[i] = ( Int64)(Int16)input.GetValue(i);
1062	}
1063	break;
1064
1065	case "single[]":
1066	for (int i = 0; i < input.Length; i++) {
1067	ret[i] = ( Int64)(float)input.GetValue(i);
1068	}
1069	break;
1070
1071	case "double[]":
1072	for (int i = 0; i < input.Length; i++) {
1073	ret[i] = ( Int64)(double)input.GetValue(i);
1074	}
1075	break;
1076
1077	case "byte[]":
1078	for (int i = 0; i < input.Length; i++) {
1079	ret[i] = ( Int64)(byte)input.GetValue(i);
1080	}
1081	break;
1082	case "sbyte[]":
1083	for (int i = 0; i < input.Length; i++) {
1084	ret[i] = ( Int64)(sbyte)input.GetValue(i);
1085	}
1086	break;
1087	default:
1088	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1089	}
1090	return ret;
1091	}
1092
1093
1094	private Int32[] Convert2Int32Array(System.Array input) {
1095	// keep track of type matches ! No checks will be made!
1096
1097	Int32[] ret = new Int32[input.Length];
1098	switch (input.GetType().Name.ToLower()) {
1099	case "char[]":
1100	for (int i = 0; i < input.Length; i++) {
1101	ret[i] = ( Int32)(char)input.GetValue(i);
1102	}
1103	break;
1104
1105	case "uint64[]":
1106	for (int i = 0; i < input.Length; i++) {
1107	ret[i] = ( Int32)(UInt64)input.GetValue(i);
1108	}
1109	break;
1110
1111	case "uint32[]":
1112	for (int i = 0; i < input.Length; i++) {
1113	ret[i] = ( Int32)(UInt32)input.GetValue(i);
1114	}
1115	break;
1116
1117	case "uint16[]":
1118	for (int i = 0; i < input.Length; i++) {
1119	ret[i] = ( Int32)(UInt16)input.GetValue(i);
1120	}
1121	break;
1122
1123	case "int64[]":
1124	for (int i = 0; i < input.Length; i++) {
1125	ret[i] = ( Int32)(Int64)input.GetValue(i);
1126	}
1127	break;
1128
1129	case "int32[]":
1130	for (int i = 0; i < input.Length; i++) {
1131	ret[i] = ( Int32)(Int32)input.GetValue(i);
1132	}
1133	break;
1134
1135	case "int16[]":
1136	for (int i = 0; i < input.Length; i++) {
1137	ret[i] = ( Int32)(Int16)input.GetValue(i);
1138	}
1139	break;
1140
1141	case "single[]":
1142	for (int i = 0; i < input.Length; i++) {
1143	ret[i] = ( Int32)(float)input.GetValue(i);
1144	}
1145	break;
1146
1147	case "double[]":
1148	for (int i = 0; i < input.Length; i++) {
1149	ret[i] = ( Int32)(double)input.GetValue(i);
1150	}
1151	break;
1152
1153	case "byte[]":
1154	for (int i = 0; i < input.Length; i++) {
1155	ret[i] = ( Int32)(byte)input.GetValue(i);
1156	}
1157	break;
1158	case "sbyte[]":
1159	for (int i = 0; i < input.Length; i++) {
1160	ret[i] = ( Int32)(sbyte)input.GetValue(i);
1161	}
1162	break;
1163	default:
1164	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1165	}
1166	return ret;
1167	}
1168
1169
1170	private Int16[] Convert2Int16Array(System.Array input) {
1171	// keep track of type matches ! No checks will be made!
1172
1173	Int16[] ret = new Int16[input.Length];
1174	switch (input.GetType().Name.ToLower()) {
1175	case "char[]":
1176	for (int i = 0; i < input.Length; i++) {
1177	ret[i] = ( Int16)(char)input.GetValue(i);
1178	}
1179	break;
1180
1181	case "uint64[]":
1182	for (int i = 0; i < input.Length; i++) {
1183	ret[i] = ( Int16)(UInt64)input.GetValue(i);
1184	}
1185	break;
1186
1187	case "uint32[]":
1188	for (int i = 0; i < input.Length; i++) {
1189	ret[i] = ( Int16)(UInt32)input.GetValue(i);
1190	}
1191	break;
1192
1193	case "uint16[]":
1194	for (int i = 0; i < input.Length; i++) {
1195	ret[i] = ( Int16)(UInt16)input.GetValue(i);
1196	}
1197	break;
1198
1199	case "int64[]":
1200	for (int i = 0; i < input.Length; i++) {
1201	ret[i] = ( Int16)(Int64)input.GetValue(i);
1202	}
1203	break;
1204
1205	case "int32[]":
1206	for (int i = 0; i < input.Length; i++) {
1207	ret[i] = ( Int16)(Int32)input.GetValue(i);
1208	}
1209	break;
1210
1211	case "int16[]":
1212	for (int i = 0; i < input.Length; i++) {
1213	ret[i] = ( Int16)(Int16)input.GetValue(i);
1214	}
1215	break;
1216
1217	case "single[]":
1218	for (int i = 0; i < input.Length; i++) {
1219	ret[i] = ( Int16)(float)input.GetValue(i);
1220	}
1221	break;
1222
1223	case "double[]":
1224	for (int i = 0; i < input.Length; i++) {
1225	ret[i] = ( Int16)(double)input.GetValue(i);
1226	}
1227	break;
1228
1229	case "byte[]":
1230	for (int i = 0; i < input.Length; i++) {
1231	ret[i] = ( Int16)(byte)input.GetValue(i);
1232	}
1233	break;
1234	case "sbyte[]":
1235	for (int i = 0; i < input.Length; i++) {
1236	ret[i] = ( Int16)(sbyte)input.GetValue(i);
1237	}
1238	break;
1239	default:
1240	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1241	}
1242	return ret;
1243	}
1244
1245
1246	private char[] Convert2CharArray(System.Array input) {
1247	// keep track of type matches ! No checks will be made!
1248
1249	char[] ret = new char[input.Length];
1250	switch (input.GetType().Name.ToLower()) {
1251	case "char[]":
1252	for (int i = 0; i < input.Length; i++) {
1253	ret[i] = ( char)(char)input.GetValue(i);
1254	}
1255	break;
1256
1257	case "uint64[]":
1258	for (int i = 0; i < input.Length; i++) {
1259	ret[i] = ( char)(UInt64)input.GetValue(i);
1260	}
1261	break;
1262
1263	case "uint32[]":
1264	for (int i = 0; i < input.Length; i++) {
1265	ret[i] = ( char)(UInt32)input.GetValue(i);
1266	}
1267	break;
1268
1269	case "uint16[]":
1270	for (int i = 0; i < input.Length; i++) {
1271	ret[i] = ( char)(UInt16)input.GetValue(i);
1272	}
1273	break;
1274
1275	case "int64[]":
1276	for (int i = 0; i < input.Length; i++) {
1277	ret[i] = ( char)(Int64)input.GetValue(i);
1278	}
1279	break;
1280
1281	case "int32[]":
1282	for (int i = 0; i < input.Length; i++) {
1283	ret[i] = ( char)(Int32)input.GetValue(i);
1284	}
1285	break;
1286
1287	case "int16[]":
1288	for (int i = 0; i < input.Length; i++) {
1289	ret[i] = ( char)(Int16)input.GetValue(i);
1290	}
1291	break;
1292
1293	case "single[]":
1294	for (int i = 0; i < input.Length; i++) {
1295	ret[i] = ( char)(float)input.GetValue(i);
1296	}
1297	break;
1298
1299	case "double[]":
1300	for (int i = 0; i < input.Length; i++) {
1301	ret[i] = ( char)(double)input.GetValue(i);
1302	}
1303	break;
1304
1305	case "byte[]":
1306	for (int i = 0; i < input.Length; i++) {
1307	ret[i] = ( char)(byte)input.GetValue(i);
1308	}
1309	break;
1310	case "sbyte[]":
1311	for (int i = 0; i < input.Length; i++) {
1312	ret[i] = ( char)(sbyte)input.GetValue(i);
1313	}
1314	break;
1315	default:
1316	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1317	}
1318	return ret;
1319	}
1320
1321
1322	private float[] Convert2SingleArray(System.Array input) {
1323	// keep track of type matches ! No checks will be made!
1324
1325	float[] ret = new float[input.Length];
1326	switch (input.GetType().Name.ToLower()) {
1327	case "char[]":
1328	for (int i = 0; i < input.Length; i++) {
1329	ret[i] = ( float)(char)input.GetValue(i);
1330	}
1331	break;
1332
1333	case "uint64[]":
1334	for (int i = 0; i < input.Length; i++) {
1335	ret[i] = ( float)(UInt64)input.GetValue(i);
1336	}
1337	break;
1338
1339	case "uint32[]":
1340	for (int i = 0; i < input.Length; i++) {
1341	ret[i] = ( float)(UInt32)input.GetValue(i);
1342	}
1343	break;
1344
1345	case "uint16[]":
1346	for (int i = 0; i < input.Length; i++) {
1347	ret[i] = ( float)(UInt16)input.GetValue(i);
1348	}
1349	break;
1350
1351	case "int64[]":
1352	for (int i = 0; i < input.Length; i++) {
1353	ret[i] = ( float)(Int64)input.GetValue(i);
1354	}
1355	break;
1356
1357	case "int32[]":
1358	for (int i = 0; i < input.Length; i++) {
1359	ret[i] = ( float)(Int32)input.GetValue(i);
1360	}
1361	break;
1362
1363	case "int16[]":
1364	for (int i = 0; i < input.Length; i++) {
1365	ret[i] = ( float)(Int16)input.GetValue(i);
1366	}
1367	break;
1368
1369	case "single[]":
1370	for (int i = 0; i < input.Length; i++) {
1371	ret[i] = ( float)(float)input.GetValue(i);
1372	}
1373	break;
1374
1375	case "double[]":
1376	for (int i = 0; i < input.Length; i++) {
1377	ret[i] = ( float)(double)input.GetValue(i);
1378	}
1379	break;
1380
1381	case "byte[]":
1382	for (int i = 0; i < input.Length; i++) {
1383	ret[i] = ( float)(byte)input.GetValue(i);
1384	}
1385	break;
1386	case "sbyte[]":
1387	for (int i = 0; i < input.Length; i++) {
1388	ret[i] = ( float)(sbyte)input.GetValue(i);
1389	}
1390	break;
1391	default:
1392	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1393	}
1394	return ret;
1395	}
1396
1397	#endregion HYCALPER AUTO GENERATED CODE
1398
1399	private byte[] Convert2Logical(System.Array input, out int numNonzero) {
1400	// keep track of type matches ! No checks will be made!
1401	numNonzero = 0;
1402	byte[] ret = new byte[input.Length];
1403	switch (input.GetType().Name.ToLower()) {
1404	case "char[]":
1405	for (int i = 0; i < input.Length; i++) {
1406	if ((char)input.GetValue(i) == 0) {
1407	ret[i] = 0;
1408	} else {
1409	ret[i] = 1;
1410	numNonzero++;
1411	}
1412	}
1413	break;
1414
1415	case "uint64[]":
1416	for (int i = 0; i < input.Length; i++) {
1417	if ((UInt64)input.GetValue(i) == 0) {
1418	ret[i] = 0;
1419	} else {
1420	ret[i] = 1;
1421	numNonzero++;
1422	}
1423	}
1424	break;
1425
1426	case "uint32[]":
1427	for (int i = 0; i < input.Length; i++) {
1428	if ((UInt32)input.GetValue(i) == 0) {
1429	ret[i] = 0;
1430	} else {
1431	ret[i] = 1;
1432	numNonzero++;
1433	}
1434	}
1435	break;
1436
1437	case "uint16[]":
1438	for (int i = 0; i < input.Length; i++) {
1439	if ((UInt16)input.GetValue(i) == 0) {
1440	ret[i] = 0;
1441	} else {
1442	ret[i] = 1;
1443	numNonzero++;
1444	}
1445	}
1446	break;
1447
1448	case "int64[]":
1449	for (int i = 0; i < input.Length; i++) {
1450	if ((Int64)input.GetValue(i) == 0) {
1451	ret[i] = 0;
1452	} else {
1453	ret[i] = 1;
1454	numNonzero++;
1455	}
1456	}
1457	break;
1458
1459	case "int32[]":
1460	for (int i = 0; i < input.Length; i++) {
1461	if ((Int32)input.GetValue(i) == 0) {
1462	ret[i] = 0;
1463	} else {
1464	ret[i] = 1;
1465	numNonzero++;
1466	}
1467	}
1468	break;
1469
1470	case "int16[]":
1471	for (int i = 0; i < input.Length; i++) {
1472	if ((Int16)input.GetValue(i) == 0) {
1473	ret[i] = 0;
1474	} else {
1475	ret[i] = 1;
1476	numNonzero++;
1477	}
1478	}
1479	break;
1480
1481	case "single[]":
1482	for (int i = 0; i < input.Length; i++) {
1483	if ((float)input.GetValue(i) == 0) {
1484	ret[i] = 0;
1485	} else {
1486	ret[i] = 1;
1487	numNonzero++;
1488	}
1489	}
1490	break;
1491
1492	case "double[]":
1493	for (int i = 0; i < input.Length; i++) {
1494	if ((double)input.GetValue(i) == 0) {
1495	ret[i] = 0;
1496	} else {
1497	ret[i] = 1;
1498	numNonzero++;
1499	}
1500	}
1501	break;
1502
1503	case "byte[]":
1504	for (int i = 0; i < input.Length; i++) {
1505	if ((byte)input.GetValue(i) == 0) {
1506	ret[i] = 0;
1507	} else {
1508	ret[i] = 1;
1509	numNonzero++;
1510	}
1511	}
1512	break;
1513
1514	case "sbyte[]":
1515	for (int i = 0; i < input.Length; i++) {
1516	if ((sbyte)input.GetValue(i) == 0) {
1517	ret[i] = 0;
1518	} else {
1519	ret[i] = 1;
1520	numNonzero++;
1521	}
1522	}
1523	break;
1524	default:
1525	throw new InvalidCastException("cannot convert from '" + input.GetType().Name + "'!");
1526	}
1527	return ret;
1528	}
1529	private static void readElementGeneric(BinaryReader br, MatFileType storageType, out System.Array realData, ref Int32 len) {
1530	readElementGeneric(br, storageType, out realData, ref len, 8);
1531	}
1532	/// <summary>
1533	/// read array of supported matlab data types
1534	/// </summary>
1535	/// <param name="br">binary reader, opened and correctly positioned</param>
1536	/// <param name="storageType">actual storage type</param>
1537	/// <param name="realData">output: on return, the array read</param>
1538	/// <param name="len">input: number of bytes to read, on return: number of elements in array</param>
1539	/// <param name="paddBytes">padding border, the stream will be read to the next border of length 'paddBytes'.</param>
1540	private static void readElementGeneric(BinaryReader br, MatFileType storageType, out System.Array realData, ref Int32 len, int paddBytes) {
1541	Int32 readInt = len;
1542	switch (storageType) {
1543	case MatFileType.miINT8:
1544	realData = System.Array.CreateInstance(typeof(sbyte), readInt / sizeOf(storageType));
1545	len = realData.Length;
1546	for (int i = 0; i < len; i++) {
1547	realData.SetValue(br.ReadSByte(), i);
1548	}
1549	while (len % paddBytes != 0) {
1550	br.ReadByte();
1551	len++;
1552	}
1553	break;
1554	case MatFileType.miUINT8:
1555	realData = System.Array.CreateInstance(typeof(byte), readInt / sizeOf(storageType));
1556	len = realData.Length;
1557	realData = br.ReadBytes(len);
1558	while (len % paddBytes != 0) {
1559	br.ReadByte();
1560	len++;
1561	}
1562	break;
1563	case MatFileType.miINT16:
1564	realData = System.Array.CreateInstance(typeof(short), readInt / sizeOf(storageType));
1565	len = realData.Length;
1566	for (int i = 0; i < len; i++) {
1567	realData.SetValue(br.ReadInt16(), i);
1568	}
1569	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1570	len++;
1571	br.ReadInt16();
1572	}
1573	break;
1574	case MatFileType.miUINT16:
1575	realData = System.Array.CreateInstance(typeof(UInt16), readInt / sizeOf(storageType));
1576	len = realData.Length;
1577	for (int i = 0; i < len; i++) {
1578	realData.SetValue(br.ReadUInt16(), i);
1579	}
1580	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1581	len++;
1582	br.ReadUInt16();
1583	}
1584	break;
1585	case MatFileType.miINT32:
1586	realData = System.Array.CreateInstance(typeof(Int32), readInt / sizeOf(storageType));
1587	len = realData.Length;
1588	for (int i = 0; i < len; i++) {
1589	realData.SetValue(br.ReadInt32(), i);
1590	}
1591	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1592	len++;
1593	br.ReadInt32();
1594	}
1595	break;
1596	case MatFileType.miUINT32:
1597	realData = System.Array.CreateInstance(typeof(UInt32), readInt / sizeOf(storageType));
1598	len = realData.Length;
1599	for (int i = 0; i < len; i++) {
1600	realData.SetValue(br.ReadUInt32(), i);
1601	}
1602	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1603	len++;
1604	br.ReadUInt32();
1605	}
1606	break;
1607	case MatFileType.miSINGLE:
1608	realData = System.Array.CreateInstance(typeof(float), readInt / sizeOf(storageType));
1609	len = realData.Length;
1610	for (int i = 0; i < len; i++) {
1611	realData.SetValue(br.ReadSingle(), i);
1612	}
1613	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1614	len++;
1615	br.ReadSingle();
1616	}
1617	break;
1618	case MatFileType.miDOUBLE:
1619	realData = System.Array.CreateInstance(typeof(double), readInt / sizeOf(storageType));
1620	len = realData.Length;
1621	for (int i = 0; i < len; i++) {
1622	realData.SetValue(br.ReadDouble(), i);
1623	}
1624	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1625	len++;
1626	br.ReadDouble();
1627	}
1628	break;
1629	case MatFileType.miINT64:
1630	realData = System.Array.CreateInstance(typeof(Int64), readInt / sizeOf(storageType));
1631	len = realData.Length;
1632	for (int i = 0; i < len; i++) {
1633	realData.SetValue(br.ReadInt64(), i);
1634	}
1635	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1636	len++;
1637	br.ReadInt64();
1638	}
1639	break;
1640	case MatFileType.miUINT64:
1641	realData = System.Array.CreateInstance(typeof(UInt64), readInt / sizeOf(storageType));
1642	len = realData.Length;
1643	for (int i = 0; i < len; i++) {
1644	realData.SetValue(br.ReadUInt64(), i);
1645	}
1646	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1647	len++;
1648	br.ReadInt64();
1649	}
1650	break;
1651	case MatFileType.miMATRIX:
1652	throw new NotSupportedException("matrix data type not expected as inner datatype!");
1653	case MatFileType.miCOMPRESSED:
1654	throw new NotSupportedException("Compressed matrix are not supported (yet)! ");
1655	case MatFileType.miUTF8:
1656	realData = System.Array.CreateInstance(typeof(UTF8Encoding), readInt / sizeOf(storageType));
1657	len = realData.Length;
1658	for (int i = 0; i < len; i++) {
1659	realData.SetValue(br.ReadUInt16(), i);
1660	}
1661	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1662	len++;
1663	br.ReadInt16();
1664	}
1665	break;
1666	case MatFileType.miUTF16:
1667	throw new NotSupportedException("UTF16 data type not supported (yet)!");
1668	case MatFileType.miUTF32:
1669	realData = System.Array.CreateInstance(typeof(UTF32Encoding), readInt / sizeOf(storageType));
1670	len = realData.Length;
1671	for (int i = 0; i < len; i++) {
1672	realData.SetValue(br.ReadChars(2), i);
1673	}
1674	while ((len * sizeOf(storageType) % paddBytes) != 0) {
1675	len++;
1676	br.ReadChars(2);
1677	}
1678	break;
1679	default:
1680	throw new Exception("Unknown element data type found! Cancelling...");
1681	}
1682	}
1683	private void write(BinaryWriter fileout) {
1684	try {
1685	// write MAT-header
1686	StringBuilder headerLine = new StringBuilder("vers. 5.0 MAT-FILE Creator: ILNumerics, 2011");
1687	while (headerLine.Length < 123)
1688	headerLine.Append(' ');
1689	fileout.Write(headerLine.ToString());
1690	fileout.Write((short)0x0100);
1691	fileout.Write((short)0x4d49);
1692	int tmpInt = 0;
1693	foreach (string name in Keys) {
1694	ILBaseArray arr = this[name];
1695	using (ILScope.Enter(arr)) {
1696	// determine overall length
1697	int[] dimensionSubelement = createDimensionSubelement(arr);
1698	byte[] nameElememData; int nameElemType;
1699	createNameSubelement(name, out nameElemType, out nameElememData);
1700	// write subarray header
1701	// mxarray subelement type
1702	fileout.Write((int)MatFileType.miMATRIX);
1703	// determine length of single array element
1704	int elemLen = getElementLength(arr);
1705	//System.Diagnostics.Debug.Assert(arr.IsMatrix,"TODO: n-dim. arrays are not implemented yet!");
1706	// overall length of subarray container
1707	int allLength = 16 // array flags
1708	+ dimensionSubelement.Length * 4 // dimension element
1709	+ nameElememData.Length + 8; // name element
1710	int dataSubelemLen = elemLen * arr.Size.NumberOfElements + 8;
1711	// recognize padding!
1712	if (dataSubelemLen % 8 != 0)
1713	dataSubelemLen += (8 - ((elemLen * arr.Size.NumberOfElements) % 8));
1714	allLength += dataSubelemLen;
1715	if (arr.IsComplex)
1716	allLength += dataSubelemLen;
1717	fileout.Write(allLength);
1718	// subelement: array flags
1719	// miUInt32 , length: 8
1720	fileout.Write((int)MatFileType.miUINT32);
1721	fileout.Write(8);
1722	// write array flags
1723	int flag = getElementClass(arr);
1724	if (arr.IsComplex)
1725	flag \|= mtFLAG_COMPLEX;
1726	if (arr is ILBaseLogical)
1727	flag \|= mtFLAG_LOGICAL;
1728	fileout.Write(flag);
1729	fileout.Write(0); // this is later used for sparse arrays
1730	// write dimensions tag
1731	for (int i = 0; i < dimensionSubelement.Length; i++)
1732	fileout.Write(dimensionSubelement[i]);
1733	// write array name
1734	fileout.Write((int)MatFileType.miINT8);
1735	fileout.Write(name.Length);
1736	fileout.Write(nameElememData);
1737	// write matrix elements
1738	allLength = arr.Size.NumberOfElements;
1739	if (false) {
1740
1741	} else if (arr is ILDenseArray<double>) {
1742	// header of array subdata element
1743	fileout.Write((int) MatFileType.miDOUBLE);
1744	fileout.Write(allLength * elemLen);
1745	ILDenseArray<double> tmp = (arr as ILDenseArray<double>);
1746
1747	double[] arrArray = tmp.GetArrayForRead();
1748	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1749	fileout.Write( //
1750	arrArray[i] //
1751	);
1752	}
1753
1754	#region HYCALPER AUTO GENERATED CODE
1755
1756	} else if (arr is ILDenseArray<fcomplex>) {
1757	// header of array subdata element
1758	fileout.Write((int) MatFileType.miSINGLE);
1759	fileout.Write(allLength * elemLen);
1760	ILDenseArray<fcomplex> tmp = (arr as ILDenseArray<fcomplex>);
1761
1762	fcomplex[] arrArray = tmp.GetArrayForRead();
1763	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1764	fileout.Write(
1765	arrArray[i] .real
1766	);
1767	}
1768	} else if (arr is ILDenseArray<complex>) {
1769	// header of array subdata element
1770	fileout.Write((int) MatFileType.miDOUBLE);
1771	fileout.Write(allLength * elemLen);
1772	ILDenseArray<complex> tmp = (arr as ILDenseArray<complex>);
1773
1774	complex[] arrArray = tmp.GetArrayForRead();
1775	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1776	fileout.Write(
1777	arrArray[i] .real
1778	);
1779	}
1780	} else if (arr is ILDenseArray<UInt32>) {
1781	// header of array subdata element
1782	fileout.Write((int) MatFileType.miUINT32);
1783	fileout.Write(allLength * elemLen);
1784	ILDenseArray<UInt32> tmp = (arr as ILDenseArray<UInt32>);
1785
1786	UInt32[] arrArray = tmp.GetArrayForRead();
1787	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1788	fileout.Write(
1789	arrArray[i]
1790	);
1791	}
1792	} else if (arr is ILDenseArray<UInt16>) {
1793	// header of array subdata element
1794	fileout.Write((int) MatFileType.miUINT16);
1795	fileout.Write(allLength * elemLen);
1796	ILDenseArray<UInt16> tmp = (arr as ILDenseArray<UInt16>);
1797
1798	UInt16[] arrArray = tmp.GetArrayForRead();
1799	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1800	fileout.Write(
1801	arrArray[i]
1802	);
1803	}
1804	} else if (arr is ILDenseArray<Int32>) {
1805	// header of array subdata element
1806	fileout.Write((int) MatFileType.miINT32);
1807	fileout.Write(allLength * elemLen);
1808	ILDenseArray<Int32> tmp = (arr as ILDenseArray<Int32>);
1809
1810	Int32[] arrArray = tmp.GetArrayForRead();
1811	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1812	fileout.Write(
1813	arrArray[i]
1814	);
1815	}
1816	} else if (arr is ILDenseArray<Int16>) {
1817	// header of array subdata element
1818	fileout.Write((int) MatFileType.miINT16);
1819	fileout.Write(allLength * elemLen);
1820	ILDenseArray<Int16> tmp = (arr as ILDenseArray<Int16>);
1821
1822	Int16[] arrArray = tmp.GetArrayForRead();
1823	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1824	fileout.Write(
1825	arrArray[i]
1826	);
1827	}
1828	} else if (arr is ILDenseArray<float>) {
1829	// header of array subdata element
1830	fileout.Write((int) MatFileType.miSINGLE);
1831	fileout.Write(allLength * elemLen);
1832	ILDenseArray<float> tmp = (arr as ILDenseArray<float>);
1833
1834	float[] arrArray = tmp.GetArrayForRead();
1835	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1836	fileout.Write(
1837	arrArray[i]
1838	);
1839	}
1840	} else if (arr is ILDenseArray<char>) {
1841	// header of array subdata element
1842	fileout.Write((int) MatFileType.miUINT16);
1843	fileout.Write(allLength * elemLen);
1844	ILDenseArray<char> tmp = (arr as ILDenseArray<char>);
1845
1846	char[] arrArray = tmp.GetArrayForRead();
1847	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1848	fileout.Write( (UInt16)
1849	arrArray[i]
1850	);
1851	}
1852	} else if (arr is ILDenseArray<byte>) {
1853	// header of array subdata element
1854	fileout.Write((int) MatFileType.miUINT8);
1855	fileout.Write(allLength * elemLen);
1856	ILDenseArray<byte> tmp = (arr as ILDenseArray<byte>);
1857
1858	byte[] arrArray = tmp.GetArrayForRead();
1859	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1860	fileout.Write(
1861	arrArray[i]
1862	);
1863	}
1864	} else if (arr is ILDenseArray<UInt64>) {
1865	// header of array subdata element
1866	fileout.Write((int) MatFileType.miUINT64);
1867	fileout.Write(allLength * elemLen);
1868	ILDenseArray<UInt64> tmp = (arr as ILDenseArray<UInt64>);
1869
1870	UInt64[] arrArray = tmp.GetArrayForRead();
1871	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1872	fileout.Write(
1873	arrArray[i]
1874	);
1875	}
1876	} else if (arr is ILDenseArray<Int64>) {
1877	// header of array subdata element
1878	fileout.Write((int) MatFileType.miINT64);
1879	fileout.Write(allLength * elemLen);
1880	ILDenseArray<Int64> tmp = (arr as ILDenseArray<Int64>);
1881
1882	Int64[] arrArray = tmp.GetArrayForRead();
1883	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1884	fileout.Write(
1885	arrArray[i]
1886	);
1887	}
1888	} else if (arr is ILDenseArray<sbyte>) {
1889	// header of array subdata element
1890	fileout.Write((int) MatFileType.miINT8);
1891	fileout.Write(allLength * elemLen);
1892	ILDenseArray<sbyte> tmp = (arr as ILDenseArray<sbyte>);
1893
1894	sbyte[] arrArray = tmp.GetArrayForRead();
1895	for (int i = 0; i < arr.Size.NumberOfElements; i++) {
1896	fileout.Write(
1897	arrArray[i]
1898	);
1899	}
1900
1901	#endregion HYCALPER AUTO GENERATED CODE
1902	} else {
1903	throw new FormatException("The format of the array was not known!");
1904	}
1905	// pad to 8 byte border
1906	tmpInt = allLength * elemLen;
1907	byte dummy = 0;
1908	while (tmpInt % 8 != 0) {
1909	fileout.Write(dummy);
1910	tmpInt++;
1911	}
1912	#region imaginary part
1913	if (arr.IsComplex) {
1914	if (arr is ILDenseArray<complex>) {
1915	ILDenseArray<complex> tmp = (arr as ILDenseArray<complex>);
1916	// header of array subdata element
1917	fileout.Write((int)MatFileType.miDOUBLE);
1918	fileout.Write(allLength * elemLen);
1919	complex[] arrArray = tmp.GetArrayForRead();
1920	for (int i = 0; i < arrArray.Length; i++) {
1921	fileout.Write(arrArray[i].imag
1922	);
1923	}
1924	} else if (arr is ILDenseArray<fcomplex>) {
1925	fileout.Write((int)MatFileType.miSINGLE);
1926	fileout.Write(allLength * elemLen);
1927	ILDenseArray<fcomplex> tmp = (arr as ILDenseArray<fcomplex>);
1928	fcomplex[] arrArray = tmp.GetArrayForRead();
1929	for (int i = 0; i < arrArray.Length; i++) {
1930	fileout.Write(arrArray[i].imag
1931	);
1932	}
1933	}
1934	// pad to 8 byte border
1935	tmpInt = allLength * elemLen;
1936	dummy = 0;
1937	while (tmpInt % 8 != 0) {
1938	fileout.Write(dummy);
1939	tmpInt++;
1940	}
1941	}
1942	#endregion
1943	}
1944	}
1945	fileout.Close();
1946	} catch (Exception e) {
1947	throw e;
1948	}
1949	}
1950	/// <summary>
1951	/// create name subelement for Matfile storage - padded to 8 byte border
1952	/// </summary>
1953	/// <param name="arrName">name property</param>
1954	/// <param name="type">will be 'miINT8' on return</param>
1955	/// <param name="data">return data array </param>
1956	private void createNameSubelement(string arrName, out int type, out byte[] data) {
1957	int len = arrName.Length;
1958	if (len % 8 != 0)
1959	len += (8 - len % 8);
1960	data = new byte[len];
1961	for (int i = 0; i < arrName.Length; i++) {
1962	data[i] = (byte)arrName[i];
1963	}
1964	type = (int)MatFileType.miINT8;
1965	return;
1966	}
1967	private int[] createDimensionSubelement(ILBaseArray arr) {
1968	int[] ret;
1969	int LengthInt;
1970	// determine length of dimensions array byte (padding to full 8 byte border)
1971	if (arr.Size.NumberOfDimensions % 2 == 0) {
1972	LengthInt = (arr.Size.NumberOfDimensions + 2);
1973	} else {
1974	// must pad to 8 byte border
1975	LengthInt = (arr.Size.NumberOfDimensions + 3);
1976	}
1977	ret = new int[LengthInt];
1978	ret[0] = (int)MatFileType.miINT32;
1979	ret[1] = arr.Size.NumberOfDimensions * 4;
1980	for (int i = 0; i < arr.Size.NumberOfDimensions; i++) {
1981	ret[i + 2] = arr.Size[i];
1982	}
1983	return ret;
1984	}
1985	private int IndexOf(string name) {
1986	for (int i = 0; i < Count; i++) {
1987	if (m_data.GetValue<string>(i, 1, 0) == name)
1988	return i;
1989	}
1990	return -1;
1991	}
1992	private string findName(ILBaseArray value) {
1993	string elementType = string.Empty;
1994	Type type = value.GetType();
1995	if (type.GetGenericArguments() != null && type.GetGenericArguments().Length > 0) {
1996	elementType = type.GetGenericArguments()[0].Name;
1997	} else {
1998	elementType = type.Name;
1999	}
2000	string dimString = String.Join("x", value.Size.ToIntArray());
2001	string baseName = String.Format("{0}_{1}", elementType, dimString);
2002
2003	// make the new name unique
2004	string tempName = baseName;
2005	int postFix = 0;
2006	while (IndexOf(tempName) >= 0) {
2007	tempName = baseName + "_" + postFix.ToString();
2008	postFix++;
2009	}
2010	return tempName;
2011	}
2012	/// <summary>
2013	/// get mat file array class type corresponding to this arra element type
2014	/// </summary>
2015	/// <param name="arr">arra with generic system type or complex/fcomplex</param>
2016	/// <returns>mat file array class type code (int value)</returns>
2017	private static int getElementClass(ILBaseArray arr) {
2018	Type arrType = arr.GetType();
2019	if (arr is ILRetLogical \|\| arr is ILLogical)
2020	return (int)MatFileArrayClass.mxINT8_CLASS;
2021	if (!arrType.IsGenericType)
2022	throw new ILInvalidOperationException("The array type to be saved is not applicable!");
2023	string innerType = arrType.GetGenericArguments()[0].Name;
2024	switch (innerType) {
2025	case "Double":
2026	return (int)MatFileArrayClass.mxDOUBLE_CLASS;
2027	case "Single":
2028	return (int)MatFileArrayClass.mxSINGLE_CLASS;
2029	case "Int16":
2030	return (int)MatFileArrayClass.mxINT16_CLASS;
2031	case "Int32":
2032	return (int)MatFileArrayClass.mxINT32_CLASS;
2033	case "Int64":
2034	return (int)MatFileArrayClass.mxINT64_CLASS;
2035	case "UInt16":
2036	return (int)MatFileArrayClass.mxUINT16_CLASS;
2037	case "UInt32":
2038	return (int)MatFileArrayClass.mxUINT32_CLASS;
2039	case "UInt64":
2040	return (int)MatFileArrayClass.mxUINT64_CLASS;
2041	case "complex":
2042	return (int)MatFileArrayClass.mxDOUBLE_CLASS;
2043	case "fcomplex":
2044	return (int)MatFileArrayClass.mxSINGLE_CLASS;
2045	case "Byte":
2046	return (int)MatFileArrayClass.mxUINT8_CLASS;
2047	case "Char":
2048	return (int)MatFileArrayClass.mxCHAR_CLASS;
2049	default:
2050	throw new ILInvalidOperationException("Arrays of inner element type: '" + innerType + "' can not be written as Matfile!");
2051	}
2052	}
2053	/// <summary>
2054	/// get storage length of inner array elements
2055	/// </summary>
2056	/// <param name="arr">base array in question</param>
2057	/// <returns>storage length in bytes</returns>
2058	private static int getElementLength(ILBaseArray arr) {
2059	Type arrType = arr.GetType();
2060	string innerType;
2061	if (arr is ILRetLogical \|\| arr is ILLogical)
2062	return 1;
2063	if (!arrType.IsGenericType)
2064	throw new ILInvalidOperationException("The array type to be saved is not applicable!");
2065	innerType = arrType.GetGenericArguments()[0].Name;
2066	switch (innerType) {
2067	case "Double":
2068	return miSIZE_DOUBLE;
2069	case "Single":
2070	return miSIZE_SINGLE;
2071	case "Int16":
2072	return miSIZE_INT16;
2073	case "Int32":
2074	return miSIZE_INT32;
2075	case "Int64":
2076	return miSIZE_INT64;
2077	case "UInt16":
2078	return miSIZE_UINT16;
2079	case "UInt32":
2080	return miSIZE_UINT32;
2081	case "UInt64":
2082	return miSIZE_UINT64;
2083	case "complex":
2084	return miSIZE_DOUBLE;
2085	case "fcomplex":
2086	return miSIZE_SINGLE;
2087	case "Byte":
2088	return miSIZE_INT8;
2089	case "Char":
2090	return miSIZE_UINT16;
2091	default:
2092	throw new ILInvalidOperationException("Arrays of inner element type: '" + innerType + "' can not be written as Matfile!");
2093	}
2094	}
2095	#endregion
2096
2097	#region public interface
2098	/// <summary>
2099	/// Convert MatFileType enumeration member to string representation
2100	/// </summary>
2101	/// <param name="type">MatFileType enumeration member</param>
2102	/// <returns>String representing the Matlab's inner element type</returns>
2103	/// <remarks>This function is obsolete. You may directly use the enumeration's functionality instead.</remarks>
2104	public static String typeToString(MatFileType type)
2105	{
2106	String s;
2107	switch (type)
2108	{
2109	case MatFileType.miUNKNOWN:
2110	s = "unknown";
2111	break;
2112	case MatFileType.miINT8:
2113	s = "int8";
2114	break;
2115	case MatFileType.miUINT8:
2116	s = "uint8";
2117	break;
2118	case MatFileType.miINT16:
2119	s = "int16";
2120	break;
2121	case MatFileType.miUINT16:
2122	s = "uint16";
2123	break;
2124	case MatFileType.miINT32:
2125	s = "int32";
2126	break;
2127	case MatFileType.miUINT32:
2128	s = "uint32";
2129	break;
2130	case MatFileType.miSINGLE:
2131	s = "single";
2132	break;
2133	case MatFileType.miDOUBLE:
2134	s = "double";
2135	break;
2136	case MatFileType.miINT64:
2137	s = "int64";
2138	break;
2139	case MatFileType.miUINT64:
2140	s = "uint64";
2141	break;
2142	case MatFileType.miMATRIX:
2143	s = "matrix";
2144	break;
2145	case MatFileType.miCOMPRESSED:
2146	s = "compressed";
2147	break;
2148	case MatFileType.miUTF8:
2149	s = "uft8";
2150	break;
2151	case MatFileType.miUTF16:
2152	s = "utf16";
2153	break;
2154	case MatFileType.miUTF32:
2155	s = "utf32";
2156	break;
2157	default:
2158	s = "unknown";
2159	break;
2160	}
2161	return s;
2162	}
2163	/// <summary>
2164	/// Add array to collection of arrays in this ILMatFile container
2165	/// </summary>
2166	/// <param name="A">Array to be added to ILMatFile</param>
2167	/// <returns>String used to identify the array in the collection of arrays</returns>
2168	/// <remarks><para>The internal <c>Name</c> property of array given will be used as identification key.</para>
2169	/// <para>Note, the test if elements of A are supported by MatFile specification is done if the MatFile is to be written to stream ('write').</para></remarks>
2170	/// <exception cref="ILNumerics.Exceptions.ILInvalidOperationException">If the internal name of A does not fullfill the restrictions given by Matlab.</exception>
2171	public string AddArray(ILBaseArray A, string key = "") {
2172	using (ILScope.Enter(A)) {
2173	string name = key;
2174	if (String.IsNullOrEmpty(name)) {
2175	name = A.Name;
2176	}
2177	if (String.IsNullOrEmpty(name)) {
2178	name = findName(A);
2179	}
2180	this[name] = A;
2181	return name;
2182	}
2183	}
2184	/// <summary>
2185	/// List all key names currently stored with arrays
2186	/// </summary>
2187	[System.Diagnostics.DebuggerBrowsable(System.Diagnostics.DebuggerBrowsableState.RootHidden)]
2188	public IList<string> Keys {
2189	get {
2190	List<string> ret = new List<string>();
2191	for (int i = 0; i < m_data.S[0]; i++) {
2192	ret.Add(m_data.GetValue<string>(i, 1, 0));
2193	}
2194	return ret;
2195	}
2196	}
2197	/// <summary>
2198	/// Retrieve a cell with all arrays stored in the mat file
2199	/// </summary>
2200	/// <remarks>The cell returned will be clone of the arrays stored in the mat file. Altering any cell
2201	/// elements will leave the arrays in the matfile (class/memory object) untouched.
2202	/// <para>The cell returned will be of size [n,2], where n is the number of arrays contained. The
2203	/// first row saved the arrays, the second row containes scalar string arrays with the name of
2204	/// the array in the corresponding row.</para>
2205	/// </remarks>
2206	public ILRetCell Arrays {
2207	get { return m_data.C; }
2208	protected set { m_data.a = value; }
2209	}
2210	/// <summary>
2211	/// Write this mat file into a binary stream
2212	/// </summary>
2213	/// <param name="stream">Stream to receive data. This will commonly be a FileStream object.</param>
2214	/// <remarks>
2215	/// <para>This method writes the full content of the current mat file into a binary stream. The file
2216	/// afterwards is suitable to be read again by ILNumerics.MatFile classes or by compatible *.mat file
2217	/// readers - including Matlab, e.g.</para>
2218	/// <example><code>
2219	/// MatFile m = new MatFile(myarrays);
2220	/// using (Stream s = new FileStream("test.mat",FileMode.Create)) {
2221	/// m.Write(s);
2222	/// }
2223	/// </code></example></remarks>
2224	public void Write(Stream stream) {
2225	using (BinaryWriter fileout = new BinaryWriter(stream)) {
2226	write(fileout);
2227	}
2228	}
2229	/// <summary>
2230	/// Write all arrays to *.mat file
2231	/// </summary>
2232	/// <param name="filename">Filename of the file to write the mat file to</param>
2233	/// <remarks>
2234	/// <para>The method writes the full content of the matfile to the file specified. If the filename
2235	/// points to a file which already exists, that file will be overwritten. Otherwise a new file will
2236	/// be created. </para>
2237	/// <para>The file will be suitable for reading by ILNumerics.MatFile classes or by compatible *.mat file
2238	/// readers - including e.g. matlab</para>
2239	/// </remarks>
2240	public void Write(string filename) {
2241	using (FileStream fs = new FileStream(filename, FileMode.OpenOrCreate)) {
2242	Write(fs);
2243	}
2244	}
2245	/// <summary>
2246	/// Add/set arrays to the MatFile array container
2247	/// </summary>
2248	/// <param name="name">The name of the array for display in Matlab</param>
2249	/// <remarks><para>For get access the name must exist as key in the container. Use the MatFile.Keys property to get a list of all names if needed</para>
2250	/// <para>For set access, the name given must not be null or empty. It cannot be one of the <see cref="ReservedKeywords">ReservedKeywords</see>.
2251	/// If the name allready exist in the collection as name, the array currently assigned to it will be replaced. If the value is null, the current array will be removed from the list. If the name does
2252	/// not already exist, the new array will be added and assigned to this name.</para>
2253	/// <para>Restrictions on array names: Matlab allowes variables to have names of maximum length 63. Therefore, if the
2254	/// name given was larger than 63, it will be abbreviated. Names must start with a letter and contain only digits, (ASCII) letters or underscores '_'.</para></remarks>
2255	/// <exception cref="ILArgumentException">If the name does not fullfill the restrictions given from Matlab</exception>
2256	public ILBaseArray this[string name] {
2257	internal get {
2258	return m_data.GetBaseArray(IndexOf(name), 0);
2259	}
2260	set {
2261	using (ILScope.Enter(value)) {
2262	#region test if name is valid
2263	if (String.IsNullOrEmpty(name)) {
2264	name = findName(value);
2265	}
2266	foreach (string nono in ReservedKeywords) {
2267	if (name == nono)
2268	throw new ILArgumentException("MatFile: the name " + nono + " is a reserved keyword in Matlab and may not be used as array name!");
2269	}
2270	if (name.Length > 63)
2271	name = name.Substring(0, 63);
2272	if (!Char.IsLetter(name[0]))
2273	throw new ILArgumentException("MatFile: the name must start with a letter!");
2274	int i;
2275	for (i = 1; i < name.Length; i++) {
2276	char c = name[i];
2277	if (!Char.IsLetter(c) && !Char.IsDigit(c) && c != '_')
2278	throw new ILArgumentException("MatFile: variable names must contain letters, digits or underscores only!");
2279	}
2280	#endregion
2281	i = IndexOf(name);
2282	if (i >= 0) {
2283	// alter array
2284	if (object.Equals(value, null))
2285	// remove from
2286	m_data[i, ILMath.full] = null;
2287	else
2288	m_data.SetValue(value, i, 0);
2289	} else {
2290	if (object.Equals(value, null))
2291	return;
2292	// add array
2293	m_data.SetValue(name, m_data.S[0], 1);
2294	m_data.SetValue(value, m_data.S[0] - 1, 0);
2295	}
2296	}
2297	}
2298	}
2299	/// <summary>
2300	/// Number of arrays in the mat file container
2301	/// </summary>
2302	public int Count { get { return m_data.S[0]; } }
2303	/// <summary>
2304	/// Retrieve array by name
2305	/// </summary>
2306	/// <typeparam name="T">Expected type of the array</typeparam>
2307	/// <param name="name">Name of the array to retrieve</param>
2308	/// <returns>A clone of the array found or null, if no array with the given name exists</returns>
2309	public ILRetArray<T> GetArray<T>(string name) {
2310	int ind = IndexOf(name);
2311	if (ind >= 0)
2312	return m_data.GetArray<T>(ind, 0);
2313	throw new ILArgumentException("no array with name '" + name + "' found");
2314	}
2315	/// <summary>
2316	/// Retrieve array by index
2317	/// </summary>
2318	/// <typeparam name="T">Expected type of the array</typeparam>
2319	/// <param name="index">Index of the array</param>
2320	/// <returns>A clone of the array found or null, if no array at the given index exists</returns>
2321	public ILRetArray<T> GetArray<T>(ILBaseArray index) {
2322	using (ILScope.Enter(index)) {
2323	if (!index.IsScalar \|\| !index.IsNumeric)
2324	throw new ILArgumentException("index argument must be a numeric scalar");
2325	int ind = ILMath.toint32(index).GetValue(0);
2326	if (ind >= m_data.S[0])
2327	throw new ILArgumentException("index argument must be in range 0..Count-1");
2328	return m_data.GetArray<T>(ind, 0);
2329	}
2330	}
2331	#endregion
2332
2333	#region constructors
2334	/// <summary>
2335	/// Create MatFile object from existing mat file
2336	/// </summary>
2337	/// <param name="file2open">Path to Matlab mat file to open</param>
2338	/// <remarks>Curently mat files up to Matlab version 6.5 are supported. Compressed mat file content is not supported yet.</remarks>
2339	public ILMatFile(string file2open) {
2340
2341	using (ILScope.Enter()) {
2342	m_filename = file2open;
2343	using (FileStream fs = File.OpenRead(file2open)) {
2344	BinaryReader br = new BinaryReader(fs);
2345	read_header(br);
2346	// read elements
2347	ILCell targetCell = ILMath.cell(new ILSize(0, 2), null);
2348	while (br.BaseStream.Position < br.BaseStream.Length - 7) {
2349	MatFileType dataType = (MatFileType)Enum.Parse(typeof(MatFileType), br.ReadInt32().ToString());
2350	// the length of this chunk may be used for error checking, but....
2351	int len = br.ReadInt32();
2352	switch (dataType) {
2353	case MatFileType.miCOMPRESSED:
2354	ILBaseArray mat = read_compressed(br, len);
2355	targetCell.SetValue(mat.Name, targetCell.S[0], 1);
2356	targetCell.SetValue(mat, targetCell.S[0] - 1, 0);
2357	break;
2358	case MatFileType.miMATRIX:
2359	mat = read_miMATRIX(br);
2360	targetCell.SetValue(mat.Name, targetCell.S[0], 1);
2361	targetCell.SetValue(mat, targetCell.S[0] - 1, 0);
2362	break;
2363	default:
2364	// ignore all other elements, not supported yet
2365	break;
2366	}
2367	}
2368	m_data.a = targetCell;
2369	br.Close();
2370	}
2371	}
2372	}
2373	/// <summary>
2374	/// Create MatFile object from ILBaseArray
2375	/// </summary>
2376	/// <param name="input">ILBaseArray of arbitrary size/type</param>
2377	/// <exception cref="ArgumentNullException">If input array was null or one of the names in the input arrays does not fullfill the restrictions made from Matlab</exception>
2378	public ILMatFile(params ILBaseArray[] input) {
2379	if (object.Equals(input,null))
2380	throw new ArgumentNullException ("input array may not be null!");
2381	//m_data = new ILCell(input.Length,2);
2382	for (int i=0; i < input.Length; i++) {
2383	if (String.IsNullOrWhiteSpace(input[i].Name)) {
2384	this["ILArray" + i.ToString()] = input[i];
2385	} else {
2386	this[input[i].Name] = input[i];
2387	}
2388	}
2389	}
2390	/// <summary>
2391	/// Create an empty MatFile object
2392	/// </summary>
2393	public ILMatFile() {
2394	m_data = new ILCell(0,2);
2395	}
2396	#endregion
2397
2398
2399	#region IDisposable Members
2400	/// <summary>
2401	/// Dispose all arrays of the matfile object
2402	/// </summary>
2403	/// <remarks>Calling dispose should be the last action for a matfile object. It is recommended to
2404	/// utilize the matfile class in using blocks (C#) only.</remarks>
2405	public void Dispose() {
2406	if (!object.Equals(m_data,null))
2407	m_data.Dispose();
2408	}
2409
2410	#endregion
2411	}
2412	}

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