1 | #region License Information
|
---|
2 | /* HeuristicLab
|
---|
3 | * Copyright (C) 2002-2008 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
|
---|
4 | *
|
---|
5 | * This file is part of HeuristicLab.
|
---|
6 | *
|
---|
7 | * HeuristicLab is free software: you can redistribute it and/or modify
|
---|
8 | * it under the terms of the GNU General Public License as published by
|
---|
9 | * the Free Software Foundation, either version 3 of the License, or
|
---|
10 | * (at your option) any later version.
|
---|
11 | *
|
---|
12 | * HeuristicLab is distributed in the hope that it will be useful,
|
---|
13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
15 | * GNU General Public License for more details.
|
---|
16 | *
|
---|
17 | * You should have received a copy of the GNU General Public License
|
---|
18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
|
---|
19 | */
|
---|
20 | #endregion
|
---|
21 |
|
---|
22 | using System;
|
---|
23 | using System.Collections.Generic;
|
---|
24 | using System.Linq;
|
---|
25 | using System.Text;
|
---|
26 | using HeuristicLab.Core;
|
---|
27 | using HeuristicLab.Data;
|
---|
28 | using System.Xml;
|
---|
29 | using System.Globalization;
|
---|
30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
|
---|
31 |
|
---|
32 | namespace HeuristicLab.GP {
|
---|
33 |
|
---|
34 | public class LightWeightFunction {
|
---|
35 |
|
---|
36 | [Storable]
|
---|
37 | public byte arity = 0;
|
---|
38 |
|
---|
39 | [Storable]
|
---|
40 | public IFunction functionType;
|
---|
41 |
|
---|
42 | [Storable]
|
---|
43 | public List<double> data = new List<double>();
|
---|
44 |
|
---|
45 | public LightWeightFunction Clone() {
|
---|
46 | LightWeightFunction clone = new LightWeightFunction();
|
---|
47 | clone.arity = arity;
|
---|
48 | clone.functionType = functionType;
|
---|
49 | clone.data.AddRange(data);
|
---|
50 | return clone;
|
---|
51 | }
|
---|
52 | }
|
---|
53 |
|
---|
54 | public class BakedFunctionTree : ItemBase, IFunctionTree {
|
---|
55 |
|
---|
56 | private List<LightWeightFunction> linearRepresentation;
|
---|
57 |
|
---|
58 | [Storable]
|
---|
59 | public List<LightWeightFunction> LinearRepresentation {
|
---|
60 | get {
|
---|
61 | FlattenVariables();
|
---|
62 | FlattenTrees();
|
---|
63 | return linearRepresentation;
|
---|
64 | }
|
---|
65 | private set {
|
---|
66 | linearRepresentation = value;
|
---|
67 | treesExpanded = false;
|
---|
68 | variablesExpanded = false;
|
---|
69 | }
|
---|
70 | }
|
---|
71 |
|
---|
72 | private bool treesExpanded = false;
|
---|
73 | private List<IFunctionTree> subTrees;
|
---|
74 | private bool variablesExpanded = false;
|
---|
75 | private List<IVariable> variables;
|
---|
76 |
|
---|
77 | public BakedFunctionTree() {
|
---|
78 | linearRepresentation = new List<LightWeightFunction>();
|
---|
79 | }
|
---|
80 |
|
---|
81 | internal BakedFunctionTree(IFunction function)
|
---|
82 | : this() {
|
---|
83 | LightWeightFunction fun = new LightWeightFunction();
|
---|
84 | fun.functionType = function;
|
---|
85 | linearRepresentation.Add(fun);
|
---|
86 | treesExpanded = true;
|
---|
87 | subTrees = new List<IFunctionTree>();
|
---|
88 | variables = new List<IVariable>();
|
---|
89 | variablesExpanded = true;
|
---|
90 | foreach (IVariableInfo variableInfo in function.VariableInfos) {
|
---|
91 | if (variableInfo.Local) {
|
---|
92 | variables.Add((IVariable)function.GetVariable(variableInfo.FormalName).Clone());
|
---|
93 | }
|
---|
94 | }
|
---|
95 | }
|
---|
96 |
|
---|
97 | internal BakedFunctionTree(IFunctionTree tree)
|
---|
98 | : this() {
|
---|
99 | LightWeightFunction fun = new LightWeightFunction();
|
---|
100 | fun.functionType = tree.Function;
|
---|
101 | linearRepresentation.Add(fun);
|
---|
102 | foreach (IVariable variable in tree.LocalVariables) {
|
---|
103 | IItem value = variable.Value;
|
---|
104 | fun.data.Add(GetDoubleValue(value));
|
---|
105 | }
|
---|
106 | foreach (IFunctionTree subTree in tree.SubTrees) {
|
---|
107 | AddSubTree(new BakedFunctionTree(subTree));
|
---|
108 | }
|
---|
109 | }
|
---|
110 |
|
---|
111 | private double GetDoubleValue(IItem value) {
|
---|
112 | if (value is DoubleData) {
|
---|
113 | return ((DoubleData)value).Data;
|
---|
114 | } else if (value is ConstrainedDoubleData) {
|
---|
115 | return ((ConstrainedDoubleData)value).Data;
|
---|
116 | } else if (value is IntData) {
|
---|
117 | return ((IntData)value).Data;
|
---|
118 | } else if (value is ConstrainedIntData) {
|
---|
119 | return ((ConstrainedIntData)value).Data;
|
---|
120 | } else throw new NotSupportedException("Invalid datatype of local variable for GP");
|
---|
121 | }
|
---|
122 |
|
---|
123 | private int BranchLength(int branchRoot) {
|
---|
124 | int arity = linearRepresentation[branchRoot].arity;
|
---|
125 | int length = 1;
|
---|
126 | for (int i = 0; i < arity; i++) {
|
---|
127 | length += BranchLength(branchRoot + length);
|
---|
128 | }
|
---|
129 | return length;
|
---|
130 | }
|
---|
131 |
|
---|
132 | private void FlattenTrees() {
|
---|
133 | if (treesExpanded) {
|
---|
134 | linearRepresentation[0].arity = (byte)subTrees.Count;
|
---|
135 | foreach (BakedFunctionTree subTree in subTrees) {
|
---|
136 | subTree.FlattenVariables();
|
---|
137 | subTree.FlattenTrees();
|
---|
138 | linearRepresentation.AddRange(subTree.linearRepresentation);
|
---|
139 | }
|
---|
140 | treesExpanded = false;
|
---|
141 | subTrees = null;
|
---|
142 | }
|
---|
143 | }
|
---|
144 |
|
---|
145 | private void FlattenVariables() {
|
---|
146 | if (variablesExpanded) {
|
---|
147 | linearRepresentation[0].data.Clear();
|
---|
148 | foreach (IVariable variable in variables) {
|
---|
149 | linearRepresentation[0].data.Add(GetDoubleValue(variable.Value));
|
---|
150 | }
|
---|
151 | variablesExpanded = false;
|
---|
152 | variables = null;
|
---|
153 | }
|
---|
154 | }
|
---|
155 |
|
---|
156 | public int Size {
|
---|
157 | get {
|
---|
158 | if (treesExpanded) {
|
---|
159 | int size = 1;
|
---|
160 | foreach (BakedFunctionTree tree in subTrees) {
|
---|
161 | size += tree.Size;
|
---|
162 | }
|
---|
163 | return size;
|
---|
164 | } else
|
---|
165 | return linearRepresentation.Count;
|
---|
166 | }
|
---|
167 | }
|
---|
168 |
|
---|
169 | public int Height {
|
---|
170 | get {
|
---|
171 | if (treesExpanded) {
|
---|
172 | int height = 0;
|
---|
173 | foreach (IFunctionTree subTree in subTrees) {
|
---|
174 | int curHeight = subTree.Height;
|
---|
175 | if (curHeight > height) height = curHeight;
|
---|
176 | }
|
---|
177 | return height + 1;
|
---|
178 | } else {
|
---|
179 | int nextBranchStart;
|
---|
180 | return BranchHeight(0, out nextBranchStart);
|
---|
181 | }
|
---|
182 | }
|
---|
183 | }
|
---|
184 |
|
---|
185 | private int BranchHeight(int branchStart, out int nextBranchStart) {
|
---|
186 | LightWeightFunction f = linearRepresentation[branchStart];
|
---|
187 | int height = 0;
|
---|
188 | branchStart++;
|
---|
189 | for (int i = 0; i < f.arity; i++) {
|
---|
190 | int curHeight = BranchHeight(branchStart, out nextBranchStart);
|
---|
191 | if (curHeight > height) height = curHeight;
|
---|
192 | branchStart = nextBranchStart;
|
---|
193 | }
|
---|
194 | nextBranchStart = branchStart;
|
---|
195 | return height + 1;
|
---|
196 | }
|
---|
197 |
|
---|
198 | public IList<IFunctionTree> SubTrees {
|
---|
199 | get {
|
---|
200 | if (!treesExpanded) {
|
---|
201 | subTrees = new List<IFunctionTree>();
|
---|
202 | int arity = linearRepresentation[0].arity;
|
---|
203 | int branchIndex = 1;
|
---|
204 | for (int i = 0; i < arity; i++) {
|
---|
205 | BakedFunctionTree subTree = new BakedFunctionTree();
|
---|
206 | int length = BranchLength(branchIndex);
|
---|
207 | for (int j = branchIndex; j < branchIndex + length; j++) {
|
---|
208 | subTree.linearRepresentation.Add(linearRepresentation[j]);
|
---|
209 | }
|
---|
210 | branchIndex += length;
|
---|
211 | subTrees.Add(subTree);
|
---|
212 | }
|
---|
213 | treesExpanded = true;
|
---|
214 | linearRepresentation.RemoveRange(1, linearRepresentation.Count - 1);
|
---|
215 | linearRepresentation[0].arity = 0;
|
---|
216 | }
|
---|
217 | return subTrees;
|
---|
218 | }
|
---|
219 | }
|
---|
220 |
|
---|
221 | public ICollection<IVariable> LocalVariables {
|
---|
222 | get {
|
---|
223 | if (!variablesExpanded) {
|
---|
224 | variables = new List<IVariable>();
|
---|
225 | IFunction function = Function;
|
---|
226 | int localVariableIndex = 0;
|
---|
227 | foreach (IVariableInfo variableInfo in function.VariableInfos) {
|
---|
228 | if (variableInfo.Local) {
|
---|
229 | IVariable clone = (IVariable)function.GetVariable(variableInfo.FormalName).Clone();
|
---|
230 | IItem value = clone.Value;
|
---|
231 | if (value is ConstrainedDoubleData) {
|
---|
232 | ((ConstrainedDoubleData)value).Data = linearRepresentation[0].data[localVariableIndex];
|
---|
233 | } else if (value is ConstrainedIntData) {
|
---|
234 | ((ConstrainedIntData)value).Data = (int)linearRepresentation[0].data[localVariableIndex];
|
---|
235 | } else if (value is DoubleData) {
|
---|
236 | ((DoubleData)value).Data = linearRepresentation[0].data[localVariableIndex];
|
---|
237 | } else if (value is IntData) {
|
---|
238 | ((IntData)value).Data = (int)linearRepresentation[0].data[localVariableIndex];
|
---|
239 | } else throw new NotSupportedException("Invalid local variable type for GP.");
|
---|
240 | variables.Add(clone);
|
---|
241 | localVariableIndex++;
|
---|
242 | }
|
---|
243 | }
|
---|
244 | variablesExpanded = true;
|
---|
245 | linearRepresentation[0].data.Clear();
|
---|
246 | }
|
---|
247 | return variables;
|
---|
248 | }
|
---|
249 | }
|
---|
250 |
|
---|
251 | public IFunction Function {
|
---|
252 | get { return linearRepresentation[0].functionType; }
|
---|
253 | }
|
---|
254 |
|
---|
255 | public IVariable GetLocalVariable(string name) {
|
---|
256 | foreach (IVariable var in LocalVariables) {
|
---|
257 | if (var.Name == name) return var;
|
---|
258 | }
|
---|
259 | return null;
|
---|
260 | }
|
---|
261 |
|
---|
262 | public void AddVariable(IVariable variable) {
|
---|
263 | throw new NotSupportedException();
|
---|
264 | }
|
---|
265 |
|
---|
266 | public void RemoveVariable(string name) {
|
---|
267 | throw new NotSupportedException();
|
---|
268 | }
|
---|
269 |
|
---|
270 | public void AddSubTree(IFunctionTree tree) {
|
---|
271 | if (!treesExpanded) throw new InvalidOperationException();
|
---|
272 | subTrees.Add(tree);
|
---|
273 | }
|
---|
274 |
|
---|
275 | public void InsertSubTree(int index, IFunctionTree tree) {
|
---|
276 | if (!treesExpanded) throw new InvalidOperationException();
|
---|
277 | subTrees.Insert(index, tree);
|
---|
278 | }
|
---|
279 |
|
---|
280 | public void RemoveSubTree(int index) {
|
---|
281 | // sanity check
|
---|
282 | if (!treesExpanded) throw new InvalidOperationException();
|
---|
283 | subTrees.RemoveAt(index);
|
---|
284 | }
|
---|
285 |
|
---|
286 | public override object Clone(IDictionary<Guid, object> clonedObjects) {
|
---|
287 | BakedFunctionTree clone = new BakedFunctionTree();
|
---|
288 | // in case the user (de)serialized the tree between evaluation and selection we have to flatten the tree again.
|
---|
289 | if (treesExpanded) FlattenTrees();
|
---|
290 | if (variablesExpanded) FlattenVariables();
|
---|
291 | foreach (LightWeightFunction f in linearRepresentation) {
|
---|
292 | clone.linearRepresentation.Add(f.Clone());
|
---|
293 | }
|
---|
294 | return clone;
|
---|
295 | }
|
---|
296 |
|
---|
297 | public override IView CreateView() {
|
---|
298 | return new FunctionTreeView(this);
|
---|
299 | }
|
---|
300 |
|
---|
301 | //public override string ToString() {
|
---|
302 | // SymbolicExpressionExporter exporter = new SymbolicExpressionExporter();
|
---|
303 | // exporter.Visit(this);
|
---|
304 | // return exporter.GetStringRepresentation();
|
---|
305 | //}
|
---|
306 | }
|
---|
307 | }
|
---|