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source: branches/HeuristicLab.EvolutionaryTracking/HeuristicLab.Encodings.SymbolicExpressionTreeEncoding/3.4/Analyzers/SymbolicExpressionTreeLengthAnalyzer.cs @ 9246

Last change on this file since 9246 was 9237, checked in by bburlacu, 12 years ago

#1772: Merged HeuristicLab.Encodings.SymbolicExpressionTreeEncoding trunk changes into the branch. Changed fragments using the tree manipulator are now tracked using the SymbolicExpressionTreeNodeComparer.

File size: 13.0 KB
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1#region License Information
2/* HeuristicLab
3 * Copyright (C) 2002-2012 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
4 *
5 * This file is part of HeuristicLab.
6 *
7 * HeuristicLab is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * HeuristicLab is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
19 */
20#endregion
21
22using System;
23using System.Linq;
24using HeuristicLab.Analysis;
25using HeuristicLab.Common;
26using HeuristicLab.Core;
27using HeuristicLab.Data;
28using HeuristicLab.Operators;
29using HeuristicLab.Optimization;
30using HeuristicLab.Parameters;
31using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
32
33namespace HeuristicLab.Encodings.SymbolicExpressionTreeEncoding {
34  /// <summary>
35  /// An operator that tracks tree lengths of Symbolic Expression Trees
36  /// </summary>
37  [Item("SymbolicExpressionTreeLengthAnalyzer", "An operator that tracks tree lengths of Symbolic Expression Trees")]
38  [StorableClass]
39  public sealed class SymbolicExpressionTreeLengthAnalyzer : SingleSuccessorOperator, ISymbolicExpressionTreeAnalyzer {
40    private const string SymbolicExpressionTreeParameterName = "SymbolicExpressionTree";
41    private const string MaximumSymbolicExpressionTreeLengthParameterName = "MaximumSymbolicExpressionTreeLength";
42    private const string SymbolicExpressionTreeLengthsParameterName = "SymbolicExpressionTreeLengthsTable";
43    private const string SymbolicExpressionTreeLengthsHistoryParameterName = "SymbolicExpressionTreeLengthsHistoryTable";
44    private const string ResultsParameterName = "Results";
45    private const string StoreHistoryParameterName = "StoreHistory";
46    private const string UpdateIntervalParameterName = "UpdateInterval";
47    private const string UpdateCounterParameterName = "UpdateCounter";
48
49    #region Parameter properties
50    public IScopeTreeLookupParameter<ISymbolicExpressionTree> SymbolicExpressionTreeParameter {
51      get { return (IScopeTreeLookupParameter<ISymbolicExpressionTree>)Parameters[SymbolicExpressionTreeParameterName]; }
52    }
53    public ValueLookupParameter<DataTable> SymbolicExpressionTreeLengthsParameter {
54      get { return (ValueLookupParameter<DataTable>)Parameters[SymbolicExpressionTreeLengthsParameterName]; }
55    }
56    public ValueLookupParameter<DataTableHistory> SymbolicExpressionTreeLengthsHistoryParameter {
57      get { return (ValueLookupParameter<DataTableHistory>)Parameters[SymbolicExpressionTreeLengthsHistoryParameterName]; }
58    }
59    public ValueLookupParameter<ResultCollection> ResultsParameter {
60      get { return (ValueLookupParameter<ResultCollection>)Parameters[ResultsParameterName]; }
61    }
62    // history
63    public ValueParameter<BoolValue> StoreHistoryParameter {
64      get { return (ValueParameter<BoolValue>)Parameters[StoreHistoryParameterName]; }
65    }
66    public ValueParameter<IntValue> UpdateIntervalParameter {
67      get { return (ValueParameter<IntValue>)Parameters[UpdateIntervalParameterName]; }
68    }
69    public ValueParameter<IntValue> UpdateCounterParameter {
70      get { return (ValueParameter<IntValue>)Parameters[UpdateCounterParameterName]; }
71    }
72    #endregion
73    #region Properties
74    public bool EnabledByDefault {
75      get { return true; }
76    }
77    public IntValue UpdateInterval {
78      get { return UpdateIntervalParameter.Value; }
79    }
80    public IntValue UpdateCounter {
81      get { return UpdateCounterParameter.Value; }
82    }
83    public BoolValue StoreHistory {
84      get { return StoreHistoryParameter.Value; }
85    }
86    #endregion
87
88    [StorableConstructor]
89    private SymbolicExpressionTreeLengthAnalyzer(bool deserializing) : base(deserializing) { }
90    private SymbolicExpressionTreeLengthAnalyzer(SymbolicExpressionTreeLengthAnalyzer original, Cloner cloner)
91      : base(original, cloner) {
92    }
93    public override IDeepCloneable Clone(Cloner cloner) {
94      return new SymbolicExpressionTreeLengthAnalyzer(this, cloner);
95    }
96    public SymbolicExpressionTreeLengthAnalyzer()
97      : base() {
98      Parameters.Add(new ScopeTreeLookupParameter<ISymbolicExpressionTree>(SymbolicExpressionTreeParameterName, "The symbolic expression tree whose length should be calculated."));
99      Parameters.Add(new LookupParameter<IntValue>(MaximumSymbolicExpressionTreeLengthParameterName, "The maximum allowed symbolic expression tree length"));
100      Parameters.Add(new ValueLookupParameter<DataTable>(SymbolicExpressionTreeLengthsParameterName, "The data table to store the symbolic expression tree lengths."));
101      Parameters.Add(new ValueLookupParameter<DataTableHistory>(SymbolicExpressionTreeLengthsHistoryParameterName, "The data table to store the symbolic expression tree lengths history."));
102      Parameters.Add(new ValueLookupParameter<ResultCollection>(ResultsParameterName, "The results collection where the analysis values should be stored."));
103      Parameters.Add(new ValueParameter<BoolValue>(StoreHistoryParameterName, "True if the tree lengths history of the population should be stored.", new BoolValue(false)));
104      Parameters.Add(new ValueParameter<IntValue>(UpdateIntervalParameterName, "The interval in which the tree length analysis should be applied.", new IntValue(1)));
105      Parameters.Add(new ValueParameter<IntValue>(UpdateCounterParameterName, "The value which counts how many times the operator was called since the last update", new IntValue(0)));
106
107      SymbolicExpressionTreeLengthsParameter.Hidden = true;
108      SymbolicExpressionTreeLengthsHistoryParameter.Hidden = true;
109      ResultsParameter.Hidden = true;
110      UpdateCounterParameter.Hidden = true;
111    }
112
113    [StorableHook(HookType.AfterDeserialization)]
114    private void AfterDeserialization() {
115      // check if all the parameters are present and accounted for
116      if (!Parameters.ContainsKey(StoreHistoryParameterName)) {
117        Parameters.Add(new ValueParameter<BoolValue>(StoreHistoryParameterName, "True if the tree lengths history of the population should be stored.", new BoolValue(false)));
118      }
119      if (!Parameters.ContainsKey(UpdateIntervalParameterName)) {
120        Parameters.Add(new ValueParameter<IntValue>(UpdateIntervalParameterName, "The interval in which the tree length analysis should be applied.", new IntValue(1)));
121      }
122      //necessary code to correct UpdateCounterParameter - type was changed from LookupParameter to ValueParameter
123      if (Parameters.ContainsKey(UpdateCounterParameterName) && (Parameters[UpdateCounterParameterName] is LookupParameter<IntValue>))
124        Parameters.Remove(UpdateCounterParameterName);
125      if (!Parameters.ContainsKey(UpdateCounterParameterName)) {
126        Parameters.Add(new ValueParameter<IntValue>(UpdateCounterParameterName, "The value which counts how many times the operator was called since the last update", new IntValue(0)));
127        UpdateCounterParameter.Hidden = true;
128      }
129    }
130
131    #region IStatefulItem members
132    public override void InitializeState() {
133      base.InitializeState();
134      UpdateCounter.Value = 0;
135    }
136    public override void ClearState() {
137      base.ClearState();
138      UpdateCounter.Value = 0;
139    }
140    #endregion
141
142    public override IOperation Apply() {
143      UpdateCounter.Value++;
144      // the analyzer runs periodically, every 'updateInterval' times
145      if (UpdateCounter.Value == UpdateInterval.Value) {
146        UpdateCounter.Value = 0; // reset counter
147
148        // compute all tree lengths and store them in the lengthsTable
149        var solutions = SymbolicExpressionTreeParameter.ActualValue;
150
151        var treeLengthsTable = SymbolicExpressionTreeLengthsParameter.ActualValue;
152        // if the table was not created yet, we create it here
153        if (treeLengthsTable == null) {
154          treeLengthsTable = new DataTable("Tree Length Histogram");
155          SymbolicExpressionTreeLengthsParameter.ActualValue = treeLengthsTable;
156        }
157
158        // data table which stores tree length values
159        DataRow treeLengthsTableRow;
160
161        const string treeLengthsTableRowName = "Symbolic expression tree lengths";
162        const string treeLengthsTableRowDesc = "The distribution of symbolic expression tree lengths";
163        const string xAxisTitle = "Symbolic expression tree lengths";
164        const string yAxisTitle = "Frequency / Number of tree individuals";
165
166        var treeLengths = solutions.Select(s => (int)s.Length).ToList();
167
168        int maxLength = treeLengths.Max(t => t);
169        int minLength = treeLengths.Min(t => t);
170
171        if (!treeLengthsTable.Rows.ContainsKey(treeLengthsTableRowName)) {
172          treeLengthsTableRow = new DataRow(treeLengthsTableRowName, treeLengthsTableRowDesc, treeLengths.Select(x => (double)x));
173          treeLengthsTable.Rows.Add(treeLengthsTableRow);
174        } else {
175          treeLengthsTableRow = treeLengthsTable.Rows[treeLengthsTableRowName];
176          treeLengthsTableRow.Values.Replace(treeLengths.Select(x => (double)x));
177        }
178
179        double maximumAllowedTreeLength = ((LookupParameter<IntValue>)Parameters[MaximumSymbolicExpressionTreeLengthParameterName]).ActualValue.Value;
180
181        treeLengthsTableRow.VisualProperties.ChartType = DataRowVisualProperties.DataRowChartType.Histogram;
182        treeLengthsTableRow.VisualProperties.ExactBins = false;
183
184        int range = maxLength - minLength;
185        if (range == 0) range = 1;
186        // the following trick should result in an integer intervalWidth of 1,2,4,...
187        treeLengthsTableRow.VisualProperties.Bins = range;
188
189        if (maxLength <= 25) // [0,25]
190          treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0;
191        else if (maxLength <= 100) // [26,100]
192          treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 2.0;
193        else if (maxLength <= 250) // [101,250]
194          treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 5.0;
195        else if (maxLength <= 500) // [251,500]
196          treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 10.0;
197        else
198          treeLengthsTableRow.VisualProperties.ScaleFactor = 1.0 / 20.0; // [501,inf]
199
200        treeLengthsTableRow.VisualProperties.IsVisibleInLegend = false;
201
202        // visual properties for the X-axis
203        treeLengthsTable.VisualProperties.XAxisMinimumAuto = false;
204        treeLengthsTable.VisualProperties.XAxisMaximumAuto = false;
205        treeLengthsTable.VisualProperties.XAxisMinimumFixedValue = 0.0;
206        if (maxLength > maximumAllowedTreeLength + 1)
207          treeLengthsTable.VisualProperties.XAxisMaximumFixedValue = maxLength + 1; // +1 so the histogram column for the maximum length won't get trimmed
208        else
209          treeLengthsTable.VisualProperties.XAxisMaximumFixedValue = maximumAllowedTreeLength + 1;
210        treeLengthsTable.VisualProperties.XAxisTitle = xAxisTitle;
211        //visual properties for the Y-axis
212        treeLengthsTable.VisualProperties.YAxisMinimumAuto = false;
213        treeLengthsTable.VisualProperties.YAxisMaximumAuto = false;
214        treeLengthsTable.VisualProperties.YAxisMinimumFixedValue = 0.0;
215        int maxFreq = (int)Math.Round(solutions.GroupBy(s => s.Length).Max(g => g.Count()) / treeLengthsTableRow.VisualProperties.ScaleFactor);
216        if (maxFreq % 5 != 0)
217          maxFreq += (5 - maxFreq % 5);
218        double yAxisMaximumFixedValue = maxFreq;
219
220        treeLengthsTable.VisualProperties.YAxisMaximumFixedValue = yAxisMaximumFixedValue;
221        treeLengthsTable.VisualProperties.YAxisTitle = yAxisTitle;
222
223        var results = ResultsParameter.ActualValue;
224
225        if (!results.ContainsKey(treeLengthsTableRowName)) {
226          results.Add(new Result(treeLengthsTableRowName, treeLengthsTable));
227        } else {
228          results[treeLengthsTableRowName].Value = treeLengthsTable;
229        }
230
231        bool storeHistory = StoreHistoryParameter.Value.Value;
232        const string treeLengthHistoryTableName = "Tree lengths history";
233
234        if (storeHistory) {
235          var treeLengthsHistory = SymbolicExpressionTreeLengthsHistoryParameter.ActualValue;
236          if (treeLengthsHistory == null) {
237            treeLengthsHistory = new DataTableHistory();
238            SymbolicExpressionTreeLengthsHistoryParameter.ActualValue = treeLengthsHistory;
239          }
240          treeLengthsHistory.Add((DataTable)treeLengthsTable.Clone());
241
242          if (!results.ContainsKey(treeLengthHistoryTableName)) {
243            results.Add(new Result(treeLengthHistoryTableName, treeLengthsHistory));
244          } else {
245            results[treeLengthHistoryTableName].Value = treeLengthsHistory;
246          }
247        }
248      }
249      return base.Apply();
250    }
251  }
252}
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