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source: branches/FitnessLandscapeAnalysis/HeuristicLab.Problems.NK/NKLandscape.cs @ 7140

Last change on this file since 7140 was 7128, checked in by epitzer, 13 years ago

#1696 Integrate fitness landscape analysis plugins from Heureka! repository.

File size: 16.0 KB
Line 
1using System;
2using System.Collections.Generic;
3using System.Drawing;
4using System.Linq;
5using HeuristicLab.Common;
6using HeuristicLab.Common.Resources;
7using HeuristicLab.Core;
8using HeuristicLab.Data;
9using HeuristicLab.Encodings.BinaryVectorEncoding;
10using HeuristicLab.Optimization;
11using HeuristicLab.Parameters;
12using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
13using HeuristicLab.PluginInfrastructure;
14using HeuristicLab.Random;
15using HeuristicLab.Problems.NK.WeightInitializers;
16
17namespace HeuristicLab.Problems.NK {
18
19  [Item("NK Landscape", "Represents an NK landscape optimization problem.")]
20  [Creatable("Problems")]
21  [StorableClass]
22  public sealed class NKLandscape : ParameterizedNamedItem, ISingleObjectiveHeuristicOptimizationProblem, IStorableContent {
23    public string Filename { get; set; }
24
25    public override Image ItemImage {
26      get { return VSImageLibrary.Type; }
27    }
28
29    #region Parameter Properties
30    public ValueParameter<BoolValue> MaximizationParameter {
31      get { return (ValueParameter<BoolValue>)Parameters["Maximization"]; }
32    }
33    IParameter ISingleObjectiveHeuristicOptimizationProblem.MaximizationParameter {
34      get { return MaximizationParameter; }
35    }
36    public ValueParameter<IntValue> LengthParameter {
37      get { return (ValueParameter<IntValue>)Parameters["Length"]; }
38    }
39    public ValueParameter<IBinaryVectorCreator> SolutionCreatorParameter {
40      get { return (ValueParameter<IBinaryVectorCreator>)Parameters["SolutionCreator"]; }
41    }
42    IParameter IHeuristicOptimizationProblem.SolutionCreatorParameter {
43      get { return SolutionCreatorParameter; }
44    }
45    public ValueParameter<INKEvaluator> EvaluatorParameter {
46      get { return (ValueParameter<INKEvaluator>)Parameters["Evaluator"]; }
47    }
48    IParameter IHeuristicOptimizationProblem.EvaluatorParameter {
49      get { return EvaluatorParameter; }
50    }
51    public ValueParameter<DoubleValue> BestKnownQualityParameter {
52      get { return (ValueParameter<DoubleValue>)Parameters["BestKnownQuality"]; }
53    }
54    IParameter ISingleObjectiveHeuristicOptimizationProblem.BestKnownQualityParameter {
55      get { return BestKnownQualityParameter; }
56    }
57    public ValueParameter<BoolMatrix> GeneInteractionsParameter {
58      get { return (ValueParameter<BoolMatrix>)Parameters["GeneInteractions"]; }
59    }
60    public ValueParameter<IntValue> InteractionSeedParameter {
61      get { return (ValueParameter<IntValue>)Parameters["InteractionSeed"]; }
62    }
63    public ValueParameter<IntValue> NrOfInteractionsParameter {
64      get { return (ValueParameter<IntValue>)Parameters["NrOfInteractions"]; }
65    }
66    public ValueParameter<IntValue> NrOfFitnessComponentsParameter {
67      get { return (ValueParameter<IntValue>)Parameters["NrOfFitnessComponents"]; }
68    }
69    public ValueParameter<DoubleArray> WeightsParameter {
70      get { return (ValueParameter<DoubleArray>)Parameters["Weights"]; }
71    }
72    public OptionalConstrainedValueParameter<IInteractionInitializer> InteractionInitializerParameter {
73      get { return (OptionalConstrainedValueParameter<IInteractionInitializer>)Parameters["InteractionInitializer"]; }
74    }
75    public OptionalConstrainedValueParameter<IWeightsInitializer> WeightsInitializerParameter {
76      get { return (OptionalConstrainedValueParameter<IWeightsInitializer>)Parameters["WeightsInitializer"]; }
77    }   
78    #endregion
79
80    #region Properties
81    public IntValue Length {
82      get { return LengthParameter.Value; }
83      set { LengthParameter.Value = value; }
84    }
85    public IBinaryVectorCreator SolutionCreator {
86      get { return SolutionCreatorParameter.Value; }
87      set { SolutionCreatorParameter.Value = value; }
88    }
89    ISolutionCreator IHeuristicOptimizationProblem.SolutionCreator {
90      get { return SolutionCreatorParameter.Value; }
91    }
92    public INKEvaluator Evaluator {
93      get { return EvaluatorParameter.Value; }
94      set { EvaluatorParameter.Value = value; }
95    }
96    ISingleObjectiveEvaluator ISingleObjectiveHeuristicOptimizationProblem.Evaluator {
97      get { return EvaluatorParameter.Value; }
98    }
99    IEvaluator IHeuristicOptimizationProblem.Evaluator {
100      get { return EvaluatorParameter.Value; }
101    }
102    public DoubleValue BestKnownQuality {
103      get { return BestKnownQualityParameter.Value; }
104    }
105    public IEnumerable<IOperator> Operators {
106      get { return operators.Cast<IOperator>(); }
107    }
108    public IInteractionInitializer InteractionInitializer {
109      get { return InteractionInitializerParameter.Value; }
110    }       
111    //private BestOneMaxSolutionAnalyzer BestOneMaxSolutionAnalyzer {
112    //get { return operators.OfType<BestOneMaxSolutionAnalyzer>().FirstOrDefault(); }
113    //}
114    #endregion
115
116    private static MersenneTwister random = new MersenneTwister();
117
118    [Storable]
119    private List<IOperator> operators;
120
121    [StorableConstructor]
122    private NKLandscape(bool deserializing) : base(deserializing) { }
123    private NKLandscape(NKLandscape original, Cloner cloner)
124      : base(original, cloner) {
125      operators = original.operators.Select(x => (IOperator)cloner.Clone(x)).ToList();
126      AttachEventHandlers();
127    }
128    public NKLandscape()
129      : base() {
130      RandomBinaryVectorCreator creator = new RandomBinaryVectorCreator();
131      INKEvaluator evaluator = new NKEvaluator();
132
133      Parameters.Add(new ValueParameter<BoolValue>("Maximization", "Set to true as the OneMax Problem is a maximization problem.", new BoolValue(true)));
134      Parameters.Add(new ValueParameter<IntValue>("Length", "The length of the BinaryVector.", new IntValue(10)));
135      Parameters.Add(new ValueParameter<IBinaryVectorCreator>("SolutionCreator", "The operator which should be used to create new OneMax solutions.", creator));
136      Parameters.Add(new ValueParameter<INKEvaluator>("Evaluator", "The operator which should be used to evaluate NK landscape solutions.", evaluator));
137      Parameters.Add(new ValueParameter<DoubleValue>("BestKnownQuality", "The quality of the best known solution of this OneMax instance.", new DoubleValue(0)));
138      Parameters.Add(new ValueParameter<BoolMatrix>("GeneInteractions", "Every column gives the participating genes for each fitness component"));
139      Parameters.Add(new ValueParameter<IntValue>("InteractionSeed", "The seed used for the hash function to generate interaction tables.", new IntValue(random.Next())));
140      Parameters.Add(new ValueParameter<IntValue>("NrOfFitnessComponents", "Number of fitness component functions. (nr of columns in the interaction column)", new IntValue(10)));
141      Parameters.Add(new ValueParameter<IntValue>("NrOfInteractions", "Number of genes interacting with each other. (nr of True values per column in the interaction matrix)", new IntValue(3)));
142      Parameters.Add(new ValueParameter<DoubleArray>("Weights", "The weights for the component functions. If shorted, will be repeated.", new DoubleArray(new[] { 1.0 })));
143      Parameters.Add(new OptionalConstrainedValueParameter<IInteractionInitializer>("InteractionInitializer", "Initialize interactions within the component functions."));
144      Parameters.Add(new OptionalConstrainedValueParameter<IWeightsInitializer>("WeightsInitializer", "Operator to initialize weights distribution"));
145
146      InitializeInteractionInitializerParameter();
147      InitializeWeightsInitializerParameter();
148
149      ParameterizeSolutionCreator();
150      ParameterizeEvaluator();
151
152      InitializeOperators();
153      AttachEventHandlers();
154      InitializeInteractions();
155    }
156
157    private void InitializeInteractionInitializerParameter() {
158      foreach (var initializer in ApplicationManager.Manager.GetInstances<IInteractionInitializer>())
159        InteractionInitializerParameter.ValidValues.Add(initializer);
160      InteractionInitializerParameter.Value = InteractionInitializerParameter.ValidValues.First(v => v is RandomInteractionsInitializer);
161    }
162
163    private void InitializeWeightsInitializerParameter() {
164      foreach (var initializer in ApplicationManager.Manager.GetInstances<IWeightsInitializer>())
165        WeightsInitializerParameter.ValidValues.Add(initializer);
166      WeightsInitializerParameter.Value = WeightsInitializerParameter.ValidValues.First(v => v is EqualWeightsInitializer);
167    }
168
169    public override IDeepCloneable Clone(Cloner cloner) {
170      return new NKLandscape(this, cloner);
171    }
172
173    #region Events
174    public event EventHandler SolutionCreatorChanged;
175    private void OnSolutionCreatorChanged() {
176      EventHandler handler = SolutionCreatorChanged;
177      if (handler != null) handler(this, EventArgs.Empty);
178    }
179    public event EventHandler EvaluatorChanged;
180    private void OnEvaluatorChanged() {
181      EventHandler handler = EvaluatorChanged;
182      if (handler != null) handler(this, EventArgs.Empty);
183    }
184    public event EventHandler OperatorsChanged;
185    private void OnOperatorsChanged() {
186      EventHandler handler = OperatorsChanged;
187      if (handler != null) handler(this, EventArgs.Empty);
188    }
189    public event EventHandler Reset;
190    private void OnReset() {
191      EventHandler handler = Reset;
192      if (handler != null) handler(this, EventArgs.Empty);
193    }
194
195    private void SolutionCreatorParameter_ValueChanged(object sender, EventArgs e) {
196      SolutionCreator.BinaryVectorParameter.ActualNameChanged += new EventHandler(SolutionCreator_BinaryVectorParameter_ActualNameChanged);
197      ParameterizeSolutionCreator();
198      ParameterizeEvaluator();
199      ParameterizeAnalyzer();
200      ParameterizeOperators();
201      OnSolutionCreatorChanged();
202    }
203    private void SolutionCreator_BinaryVectorParameter_ActualNameChanged(object sender, EventArgs e) {
204      ParameterizeEvaluator();
205      ParameterizeAnalyzer();
206      ParameterizeOperators();
207    }
208    private void EvaluatorParameter_ValueChanged(object sender, EventArgs e) {
209      ParameterizeEvaluator();
210      ParameterizeAnalyzer();
211      OnEvaluatorChanged();
212    }
213    void LengthParameter_ValueChanged(object sender, EventArgs e) {
214      ParameterizeSolutionCreator();
215      LengthParameter.Value.ValueChanged += new EventHandler(Length_ValueChanged);
216      BestKnownQualityParameter.Value.Value = Length.Value;
217    }
218    void Length_ValueChanged(object sender, EventArgs e) {
219      NrOfFitnessComponentsParameter.Value = new IntValue(Length.Value);
220    }
221    void BestKnownQualityParameter_ValueChanged(object sender, EventArgs e) {
222      //BestKnownQualityParameter.Value.Value = Length.Value;
223    }
224    void OneBitflipMoveParameter_ActualNameChanged(object sender, EventArgs e) {
225      string name = ((ILookupParameter<OneBitflipMove>)sender).ActualName;
226      foreach (IOneBitflipMoveOperator op in Operators.OfType<IOneBitflipMoveOperator>()) {
227        op.OneBitflipMoveParameter.ActualName = name;
228      }
229    }
230
231    #endregion
232
233    #region Helpers
234    [StorableHook(HookType.AfterDeserialization)]
235    private void AfterDeserialization() {
236      if (!Parameters.ContainsKey("InteractionInitializer")) {
237        Parameters.Add(new OptionalConstrainedValueParameter<IInteractionInitializer>("InteractionInitializer", "Initialized the interaction between bits and fitness components"));
238        InitializeInteractionInitializerParameter();
239      }
240      if (!Parameters.ContainsKey("WeightsInitializer")) {
241        Parameters.Add(new OptionalConstrainedValueParameter<IWeightsInitializer>("WeightsInitializer", "Operator to initialize weights distribution"));
242        InitializeWeightsInitializerParameter();
243      }
244      AttachEventHandlers();
245    }
246
247    private void AttachEventHandlers() {
248      SolutionCreatorParameter.ValueChanged += new EventHandler(SolutionCreatorParameter_ValueChanged);
249      SolutionCreator.BinaryVectorParameter.ActualNameChanged += new EventHandler(SolutionCreator_BinaryVectorParameter_ActualNameChanged);
250      BestKnownQualityParameter.ValueChanged += new EventHandler(BestKnownQualityParameter_ValueChanged);
251      EvaluatorParameter.ValueChanged += new EventHandler(EvaluatorParameter_ValueChanged);
252      LengthParameter.ValueChanged += new EventHandler(LengthParameter_ValueChanged);
253      LengthParameter.Value.ValueChanged += new EventHandler(Length_ValueChanged);
254      NrOfInteractionsParameter.ValueChanged += InteractionParameterChanged;
255      NrOfInteractionsParameter.Value.ValueChanged += InteractionParameterChanged;
256      NrOfFitnessComponentsParameter.ValueChanged += InteractionParameterChanged;
257      NrOfFitnessComponentsParameter.Value.ValueChanged += InteractionParameterChanged;
258      InteractionInitializerParameter.ValueChanged += new EventHandler(InteractionInitializerParameter_ValueChanged);
259      WeightsInitializerParameter.ValueChanged += new EventHandler(WeightsInitializerParameter_ValueChanged);
260    }
261
262    void WeightsInitializerParameter_ValueChanged(object sender, EventArgs e) {
263      InitializeWeights();
264    }
265
266    void InteractionInitializerParameter_ValueChanged(object sender, EventArgs e) {
267      InitializeInteractions();
268    }
269
270    private void InteractionParameterChanged(object sender, EventArgs e) {
271      InitializeInteractions();
272    }
273
274    private void ParameterizeSolutionCreator() {
275      SolutionCreator.LengthParameter.ActualName = LengthParameter.Name;
276    }
277
278    private void ParameterizeEvaluator() {
279      if (Evaluator is NKEvaluator)
280        ((NKEvaluator)Evaluator).BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
281    }
282    private void ParameterizeAnalyzer() {
283      //BestOneMaxSolutionAnalyzer.MaximizationParameter.ActualName = MaximizationParameter.Name;
284      //BestOneMaxSolutionAnalyzer.BestKnownQualityParameter.ActualName = BestKnownQualityParameter.Name;
285      //BestOneMaxSolutionAnalyzer.BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
286      //BestOneMaxSolutionAnalyzer.ResultsParameter.ActualName = "Results";
287    }
288
289    private void InitializeOperators() {
290      operators = new List<IOperator>();
291      //operators.Add(new BestOneMaxSolutionAnalyzer());
292      ParameterizeAnalyzer();
293      foreach (IBinaryVectorOperator op in ApplicationManager.Manager.GetInstances<IBinaryVectorOperator>()) {
294        if (!(op is ISingleObjectiveMoveEvaluator) || (op is INKMoveEvaluator)) {
295          operators.Add(op);
296        }
297      }
298      ParameterizeOperators();
299      InitializeMoveGenerators();
300    }
301    private void InitializeMoveGenerators() {
302      foreach (IOneBitflipMoveOperator op in Operators.OfType<IOneBitflipMoveOperator>()) {
303        if (op is IMoveGenerator) {
304          op.OneBitflipMoveParameter.ActualNameChanged += new EventHandler(OneBitflipMoveParameter_ActualNameChanged);
305        }
306      }
307    }
308    private void ParameterizeOperators() {
309      foreach (IBinaryVectorCrossover op in Operators.OfType<IBinaryVectorCrossover>()) {
310        op.ParentsParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
311        op.ChildParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
312      }
313      foreach (IBinaryVectorManipulator op in Operators.OfType<IBinaryVectorManipulator>()) {
314        op.BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
315      }
316      foreach (IBinaryVectorMoveOperator op in Operators.OfType<IBinaryVectorMoveOperator>()) {
317        op.BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
318      }
319    }
320
321    private void InitializeInteractions() {     
322      if (InteractionInitializer != null)
323        GeneInteractionsParameter.Value = InteractionInitializer.InitializeInterations(
324          Length.Value,
325          NrOfFitnessComponentsParameter.Value.Value,
326          NrOfInteractionsParameter.Value.Value,
327          random);       
328    }
329
330    private void InitializeWeights() {
331      if (WeightsInitializerParameter.Value != null)
332        WeightsParameter.Value = new DoubleArray(
333          WeightsInitializerParameter.Value.GetWeights(NrOfFitnessComponentsParameter.Value.Value)
334          .ToArray());
335    }
336    #endregion
337  }
338}
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