[7128] | 1 | using System;
|
---|
| 2 | using System.Collections.Generic;
|
---|
| 3 | using System.Linq;
|
---|
| 4 | using HeuristicLab.Common;
|
---|
| 5 | using HeuristicLab.Core;
|
---|
| 6 | using HeuristicLab.Data;
|
---|
| 7 | using HeuristicLab.Encodings.BinaryVectorEncoding;
|
---|
| 8 | using HeuristicLab.Optimization;
|
---|
| 9 | using HeuristicLab.Parameters;
|
---|
| 10 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
|
---|
| 11 | using HeuristicLab.PluginInfrastructure;
|
---|
[8002] | 12 | using HeuristicLab.Problems.NK.WeightInitializers;
|
---|
[7128] | 13 | using HeuristicLab.Random;
|
---|
| 14 |
|
---|
| 15 | namespace HeuristicLab.Problems.NK {
|
---|
| 16 |
|
---|
| 17 | [Item("NK Landscape", "Represents an NK landscape optimization problem.")]
|
---|
| 18 | [Creatable("Problems")]
|
---|
| 19 | [StorableClass]
|
---|
[8005] | 20 | public sealed class NKLandscape : SingleObjectiveHeuristicOptimizationProblem<INKEvaluator, IBinaryVectorCreator>, IStorableContent {
|
---|
| 21 |
|
---|
[7128] | 22 | public string Filename { get; set; }
|
---|
| 23 |
|
---|
| 24 | #region Parameter Properties
|
---|
| 25 | public ValueParameter<IntValue> LengthParameter {
|
---|
| 26 | get { return (ValueParameter<IntValue>)Parameters["Length"]; }
|
---|
| 27 | }
|
---|
| 28 | public ValueParameter<BoolMatrix> GeneInteractionsParameter {
|
---|
| 29 | get { return (ValueParameter<BoolMatrix>)Parameters["GeneInteractions"]; }
|
---|
| 30 | }
|
---|
| 31 | public ValueParameter<IntValue> InteractionSeedParameter {
|
---|
| 32 | get { return (ValueParameter<IntValue>)Parameters["InteractionSeed"]; }
|
---|
| 33 | }
|
---|
| 34 | public ValueParameter<IntValue> NrOfInteractionsParameter {
|
---|
| 35 | get { return (ValueParameter<IntValue>)Parameters["NrOfInteractions"]; }
|
---|
| 36 | }
|
---|
| 37 | public ValueParameter<IntValue> NrOfFitnessComponentsParameter {
|
---|
| 38 | get { return (ValueParameter<IntValue>)Parameters["NrOfFitnessComponents"]; }
|
---|
| 39 | }
|
---|
| 40 | public ValueParameter<DoubleArray> WeightsParameter {
|
---|
| 41 | get { return (ValueParameter<DoubleArray>)Parameters["Weights"]; }
|
---|
| 42 | }
|
---|
[8172] | 43 | public IConstrainedValueParameter<IInteractionInitializer> InteractionInitializerParameter {
|
---|
| 44 | get { return (IConstrainedValueParameter<IInteractionInitializer>)Parameters["InteractionInitializer"]; }
|
---|
[7128] | 45 | }
|
---|
[8172] | 46 | public IConstrainedValueParameter<IWeightsInitializer> WeightsInitializerParameter {
|
---|
| 47 | get { return (IConstrainedValueParameter<IWeightsInitializer>)Parameters["WeightsInitializer"]; }
|
---|
[8002] | 48 | }
|
---|
[7128] | 49 | #endregion
|
---|
| 50 |
|
---|
| 51 | #region Properties
|
---|
| 52 | public IntValue Length {
|
---|
| 53 | get { return LengthParameter.Value; }
|
---|
| 54 | set { LengthParameter.Value = value; }
|
---|
| 55 | }
|
---|
| 56 | public IInteractionInitializer InteractionInitializer {
|
---|
| 57 | get { return InteractionInitializerParameter.Value; }
|
---|
[8002] | 58 | }
|
---|
[8005] | 59 | [Storable(AllowOneWay = true)]
|
---|
| 60 | private List<IOperator> operators {
|
---|
| 61 | set {
|
---|
[8172] | 62 | Operators.AddRange(value);
|
---|
[8005] | 63 | }
|
---|
[8172] | 64 | }
|
---|
[7128] | 65 | #endregion
|
---|
| 66 |
|
---|
| 67 | private static MersenneTwister random = new MersenneTwister();
|
---|
| 68 |
|
---|
| 69 | [StorableConstructor]
|
---|
| 70 | private NKLandscape(bool deserializing) : base(deserializing) { }
|
---|
| 71 | private NKLandscape(NKLandscape original, Cloner cloner)
|
---|
| 72 | : base(original, cloner) {
|
---|
| 73 | AttachEventHandlers();
|
---|
| 74 | }
|
---|
| 75 | public NKLandscape()
|
---|
| 76 | : base() {
|
---|
| 77 | Parameters.Add(new ValueParameter<IntValue>("Length", "The length of the BinaryVector.", new IntValue(10)));
|
---|
| 78 | Parameters.Add(new ValueParameter<BoolMatrix>("GeneInteractions", "Every column gives the participating genes for each fitness component"));
|
---|
| 79 | Parameters.Add(new ValueParameter<IntValue>("InteractionSeed", "The seed used for the hash function to generate interaction tables.", new IntValue(random.Next())));
|
---|
| 80 | Parameters.Add(new ValueParameter<IntValue>("NrOfFitnessComponents", "Number of fitness component functions. (nr of columns in the interaction column)", new IntValue(10)));
|
---|
| 81 | Parameters.Add(new ValueParameter<IntValue>("NrOfInteractions", "Number of genes interacting with each other. (nr of True values per column in the interaction matrix)", new IntValue(3)));
|
---|
| 82 | Parameters.Add(new ValueParameter<DoubleArray>("Weights", "The weights for the component functions. If shorted, will be repeated.", new DoubleArray(new[] { 1.0 })));
|
---|
| 83 | Parameters.Add(new OptionalConstrainedValueParameter<IInteractionInitializer>("InteractionInitializer", "Initialize interactions within the component functions."));
|
---|
| 84 | Parameters.Add(new OptionalConstrainedValueParameter<IWeightsInitializer>("WeightsInitializer", "Operator to initialize weights distribution"));
|
---|
| 85 |
|
---|
[8005] | 86 | SolutionCreator = new RandomBinaryVectorCreator();
|
---|
| 87 | Evaluator = new NKEvaluator();
|
---|
| 88 |
|
---|
[7128] | 89 | InitializeInteractionInitializerParameter();
|
---|
| 90 | InitializeWeightsInitializerParameter();
|
---|
| 91 |
|
---|
| 92 | ParameterizeSolutionCreator();
|
---|
| 93 | ParameterizeEvaluator();
|
---|
| 94 |
|
---|
| 95 | InitializeOperators();
|
---|
| 96 | AttachEventHandlers();
|
---|
| 97 | InitializeInteractions();
|
---|
| 98 | }
|
---|
| 99 |
|
---|
| 100 | private void InitializeInteractionInitializerParameter() {
|
---|
| 101 | foreach (var initializer in ApplicationManager.Manager.GetInstances<IInteractionInitializer>())
|
---|
| 102 | InteractionInitializerParameter.ValidValues.Add(initializer);
|
---|
| 103 | InteractionInitializerParameter.Value = InteractionInitializerParameter.ValidValues.First(v => v is RandomInteractionsInitializer);
|
---|
| 104 | }
|
---|
| 105 |
|
---|
| 106 | private void InitializeWeightsInitializerParameter() {
|
---|
| 107 | foreach (var initializer in ApplicationManager.Manager.GetInstances<IWeightsInitializer>())
|
---|
| 108 | WeightsInitializerParameter.ValidValues.Add(initializer);
|
---|
| 109 | WeightsInitializerParameter.Value = WeightsInitializerParameter.ValidValues.First(v => v is EqualWeightsInitializer);
|
---|
| 110 | }
|
---|
| 111 |
|
---|
| 112 | public override IDeepCloneable Clone(Cloner cloner) {
|
---|
| 113 | return new NKLandscape(this, cloner);
|
---|
| 114 | }
|
---|
| 115 |
|
---|
| 116 | #region Events
|
---|
[8005] | 117 | protected override void OnSolutionCreatorChanged() {
|
---|
| 118 | SolutionCreator.BinaryVectorParameter.ActualNameChanged += SolutionCreator_BinaryVectorParameter_ActualNameChanged;
|
---|
[7128] | 119 | ParameterizeSolutionCreator();
|
---|
| 120 | ParameterizeEvaluator();
|
---|
| 121 | ParameterizeAnalyzer();
|
---|
| 122 | ParameterizeOperators();
|
---|
[8005] | 123 | base.OnSolutionCreatorChanged();
|
---|
[7128] | 124 | }
|
---|
| 125 | private void SolutionCreator_BinaryVectorParameter_ActualNameChanged(object sender, EventArgs e) {
|
---|
| 126 | ParameterizeEvaluator();
|
---|
| 127 | ParameterizeAnalyzer();
|
---|
| 128 | ParameterizeOperators();
|
---|
| 129 | }
|
---|
[8005] | 130 | protected override void OnEvaluatorChanged() {
|
---|
[7128] | 131 | ParameterizeEvaluator();
|
---|
| 132 | ParameterizeAnalyzer();
|
---|
[8005] | 133 | base.OnEvaluatorChanged();
|
---|
[7128] | 134 | }
|
---|
| 135 | void LengthParameter_ValueChanged(object sender, EventArgs e) {
|
---|
| 136 | ParameterizeSolutionCreator();
|
---|
| 137 | LengthParameter.Value.ValueChanged += new EventHandler(Length_ValueChanged);
|
---|
| 138 | BestKnownQualityParameter.Value.Value = Length.Value;
|
---|
| 139 | }
|
---|
| 140 | void Length_ValueChanged(object sender, EventArgs e) {
|
---|
| 141 | NrOfFitnessComponentsParameter.Value = new IntValue(Length.Value);
|
---|
| 142 | }
|
---|
| 143 | void OneBitflipMoveParameter_ActualNameChanged(object sender, EventArgs e) {
|
---|
| 144 | string name = ((ILookupParameter<OneBitflipMove>)sender).ActualName;
|
---|
| 145 | foreach (IOneBitflipMoveOperator op in Operators.OfType<IOneBitflipMoveOperator>()) {
|
---|
| 146 | op.OneBitflipMoveParameter.ActualName = name;
|
---|
| 147 | }
|
---|
| 148 | }
|
---|
| 149 | #endregion
|
---|
| 150 |
|
---|
| 151 | #region Helpers
|
---|
| 152 | [StorableHook(HookType.AfterDeserialization)]
|
---|
| 153 | private void AfterDeserialization() {
|
---|
| 154 | if (!Parameters.ContainsKey("InteractionInitializer")) {
|
---|
| 155 | Parameters.Add(new OptionalConstrainedValueParameter<IInteractionInitializer>("InteractionInitializer", "Initialized the interaction between bits and fitness components"));
|
---|
| 156 | InitializeInteractionInitializerParameter();
|
---|
| 157 | }
|
---|
| 158 | if (!Parameters.ContainsKey("WeightsInitializer")) {
|
---|
| 159 | Parameters.Add(new OptionalConstrainedValueParameter<IWeightsInitializer>("WeightsInitializer", "Operator to initialize weights distribution"));
|
---|
| 160 | InitializeWeightsInitializerParameter();
|
---|
| 161 | }
|
---|
| 162 | AttachEventHandlers();
|
---|
| 163 | }
|
---|
| 164 |
|
---|
| 165 | private void AttachEventHandlers() {
|
---|
| 166 | SolutionCreator.BinaryVectorParameter.ActualNameChanged += new EventHandler(SolutionCreator_BinaryVectorParameter_ActualNameChanged);
|
---|
| 167 | LengthParameter.ValueChanged += new EventHandler(LengthParameter_ValueChanged);
|
---|
| 168 | LengthParameter.Value.ValueChanged += new EventHandler(Length_ValueChanged);
|
---|
| 169 | NrOfInteractionsParameter.ValueChanged += InteractionParameterChanged;
|
---|
| 170 | NrOfInteractionsParameter.Value.ValueChanged += InteractionParameterChanged;
|
---|
| 171 | NrOfFitnessComponentsParameter.ValueChanged += InteractionParameterChanged;
|
---|
| 172 | NrOfFitnessComponentsParameter.Value.ValueChanged += InteractionParameterChanged;
|
---|
| 173 | InteractionInitializerParameter.ValueChanged += new EventHandler(InteractionInitializerParameter_ValueChanged);
|
---|
| 174 | WeightsInitializerParameter.ValueChanged += new EventHandler(WeightsInitializerParameter_ValueChanged);
|
---|
| 175 | }
|
---|
| 176 |
|
---|
| 177 | void WeightsInitializerParameter_ValueChanged(object sender, EventArgs e) {
|
---|
| 178 | InitializeWeights();
|
---|
| 179 | }
|
---|
| 180 |
|
---|
| 181 | void InteractionInitializerParameter_ValueChanged(object sender, EventArgs e) {
|
---|
| 182 | InitializeInteractions();
|
---|
| 183 | }
|
---|
| 184 |
|
---|
| 185 | private void InteractionParameterChanged(object sender, EventArgs e) {
|
---|
| 186 | InitializeInteractions();
|
---|
| 187 | }
|
---|
| 188 |
|
---|
| 189 | private void ParameterizeSolutionCreator() {
|
---|
| 190 | SolutionCreator.LengthParameter.ActualName = LengthParameter.Name;
|
---|
| 191 | }
|
---|
| 192 |
|
---|
| 193 | private void ParameterizeEvaluator() {
|
---|
| 194 | if (Evaluator is NKEvaluator)
|
---|
| 195 | ((NKEvaluator)Evaluator).BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
|
---|
| 196 | }
|
---|
| 197 | private void ParameterizeAnalyzer() {
|
---|
| 198 | //BestOneMaxSolutionAnalyzer.MaximizationParameter.ActualName = MaximizationParameter.Name;
|
---|
| 199 | //BestOneMaxSolutionAnalyzer.BestKnownQualityParameter.ActualName = BestKnownQualityParameter.Name;
|
---|
| 200 | //BestOneMaxSolutionAnalyzer.BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
|
---|
| 201 | //BestOneMaxSolutionAnalyzer.ResultsParameter.ActualName = "Results";
|
---|
| 202 | }
|
---|
| 203 |
|
---|
| 204 | private void InitializeOperators() {
|
---|
| 205 | ParameterizeAnalyzer();
|
---|
| 206 | foreach (IBinaryVectorOperator op in ApplicationManager.Manager.GetInstances<IBinaryVectorOperator>()) {
|
---|
| 207 | if (!(op is ISingleObjectiveMoveEvaluator) || (op is INKMoveEvaluator)) {
|
---|
[8005] | 208 | Operators.Add(op);
|
---|
[7128] | 209 | }
|
---|
| 210 | }
|
---|
| 211 | ParameterizeOperators();
|
---|
| 212 | InitializeMoveGenerators();
|
---|
| 213 | }
|
---|
| 214 | private void InitializeMoveGenerators() {
|
---|
| 215 | foreach (IOneBitflipMoveOperator op in Operators.OfType<IOneBitflipMoveOperator>()) {
|
---|
| 216 | if (op is IMoveGenerator) {
|
---|
| 217 | op.OneBitflipMoveParameter.ActualNameChanged += new EventHandler(OneBitflipMoveParameter_ActualNameChanged);
|
---|
| 218 | }
|
---|
| 219 | }
|
---|
| 220 | }
|
---|
| 221 | private void ParameterizeOperators() {
|
---|
| 222 | foreach (IBinaryVectorCrossover op in Operators.OfType<IBinaryVectorCrossover>()) {
|
---|
| 223 | op.ParentsParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
|
---|
| 224 | op.ChildParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
|
---|
| 225 | }
|
---|
| 226 | foreach (IBinaryVectorManipulator op in Operators.OfType<IBinaryVectorManipulator>()) {
|
---|
| 227 | op.BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
|
---|
| 228 | }
|
---|
| 229 | foreach (IBinaryVectorMoveOperator op in Operators.OfType<IBinaryVectorMoveOperator>()) {
|
---|
| 230 | op.BinaryVectorParameter.ActualName = SolutionCreator.BinaryVectorParameter.ActualName;
|
---|
| 231 | }
|
---|
| 232 | }
|
---|
| 233 |
|
---|
[8002] | 234 | private void InitializeInteractions() {
|
---|
[7128] | 235 | if (InteractionInitializer != null)
|
---|
| 236 | GeneInteractionsParameter.Value = InteractionInitializer.InitializeInterations(
|
---|
| 237 | Length.Value,
|
---|
| 238 | NrOfFitnessComponentsParameter.Value.Value,
|
---|
| 239 | NrOfInteractionsParameter.Value.Value,
|
---|
[8002] | 240 | random);
|
---|
[7128] | 241 | }
|
---|
| 242 |
|
---|
| 243 | private void InitializeWeights() {
|
---|
| 244 | if (WeightsInitializerParameter.Value != null)
|
---|
| 245 | WeightsParameter.Value = new DoubleArray(
|
---|
| 246 | WeightsInitializerParameter.Value.GetWeights(NrOfFitnessComponentsParameter.Value.Value)
|
---|
| 247 | .ToArray());
|
---|
| 248 | }
|
---|
| 249 | #endregion
|
---|
[8005] | 250 |
|
---|
[7128] | 251 | }
|
---|
| 252 | }
|
---|