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source: branches/FitnessLandscapeAnalysis/HeuristicLab.Analysis.FitnessLandscape/Algorithms/RepeatedUpDownWalkAnalyzer.cs @ 13042

Last change on this file since 13042 was 9143, checked in by epitzer, 12 years ago

#1696 implement repeated up-down walks and multi-trajectory aggregation of up-down walks

File size: 4.6 KB
Line 
1using System;
2using System.Linq;
3using HeuristicLab.Analysis.FitnessLandscape.DataTables;
4using HeuristicLab.Common;
5using HeuristicLab.Core;
6using HeuristicLab.Data;
7using HeuristicLab.Operators;
8using HeuristicLab.Optimization;
9using HeuristicLab.Parameters;
10using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
11
12namespace HeuristicLab.Analysis.FitnessLandscape.Algorithms {
13
14  [Item("RepeatedUpDownWalkAnalyzer", "Analyzes and consolidates repeated up down walk analyses.")]
15  [StorableClass]
16  public class RepeatedUpDownWalkAnalyzer : SingleSuccessorOperator, IRepeatsAnalyzer {
17
18    #region Parameters
19    public ScopeTreeLookupParameter<DoubleValue> DownWalkLengthValuesParameter {
20      get { return (ScopeTreeLookupParameter<DoubleValue>)Parameters["DownWalkLengthValues"]; }
21    }
22    public ScopeTreeLookupParameter<DoubleValue> UpWalkLengthValuesParameter {
23      get { return (ScopeTreeLookupParameter<DoubleValue>)Parameters["UpWalkLengthValues"]; }
24    }
25    public ScopeTreeLookupParameter<DoubleValue> DownWalkLenVarValuesParameter {
26      get { return (ScopeTreeLookupParameter<DoubleValue>)Parameters["DownWalkLenVarValues"]; }
27    }
28    public ScopeTreeLookupParameter<DoubleValue> UpWalkLenVarValuesParameter {
29      get { return (ScopeTreeLookupParameter<DoubleValue>)Parameters["UpWalkLenVarValues"]; }
30    }
31    public LookupParameter<DoubleValue> DownWalkLengthParameter {
32      get { return (LookupParameter<DoubleValue>)Parameters["DownWalkLength"]; }
33    }
34    public LookupParameter<DoubleValue> UpWalkLengthParameter {
35      get { return (LookupParameter<DoubleValue>)Parameters["UpWalkLength"]; }
36    }
37    public LookupParameter<DoubleValue> DownWalkLenVarParameter {
38      get { return (LookupParameter<DoubleValue>)Parameters["DownWalkLenVar"]; }
39    }
40    public LookupParameter<DoubleValue> UpWalkLenVarParameter {
41      get { return (LookupParameter<DoubleValue>)Parameters["UpWalkLenVar"]; }
42    }
43    public LookupParameter<ResultCollection> ResultsParameter {
44      get { return (LookupParameter<ResultCollection>)Parameters["Results"]; }
45    }
46    #endregion
47
48    #region Construction & Cloning
49    [StorableConstructor]
50    protected RepeatedUpDownWalkAnalyzer(bool deserializing) : base(deserializing) { }
51    protected RepeatedUpDownWalkAnalyzer(RepeatedUpDownWalkAnalyzer original, Cloner cloner) : base(original, cloner) { }
52    public RepeatedUpDownWalkAnalyzer() {
53      Parameters.Add(new ScopeTreeLookupParameter<DoubleValue>("DownWalkLengthValues", "average down length values of repeats.", "DownWalkLength", 2));
54      Parameters.Add(new ScopeTreeLookupParameter<DoubleValue>("UpWalkLengthValues", "average up walk length values of repeats.", "UpWalkLength", 2));
55      Parameters.Add(new ScopeTreeLookupParameter<DoubleValue>("DownWalkLenVarValues", "down length variance values of repeats.", "DownWalkLenVar", 2));
56      Parameters.Add(new ScopeTreeLookupParameter<DoubleValue>("UpWalkLenVarValues", "down length variance values of repeats.", "UpWalkLenVar", 2));
57
58      Parameters.Add(new LookupParameter<DoubleValue>("DownWalkLength", "Consolidated average down walk length."));
59      Parameters.Add(new LookupParameter<DoubleValue>("UpWalkLength", "Consolidated average up walk length."));
60      Parameters.Add(new LookupParameter<DoubleValue>("DownWalkLenVar", "Consolidated down walk length variance."));
61      Parameters.Add(new LookupParameter<DoubleValue>("UpWalkLenVar", "Consolidated up walk length variance."));
62
63      Parameters.Add(new LookupParameter<ResultCollection>("Results", "The collection of all results."));
64    }
65    public override IDeepCloneable Clone(Cloner cloner) {
66      return new RepeatedUpDownWalkAnalyzer(this, cloner);
67    }
68    #endregion
69
70    public override IOperation Apply() {
71      AggregateValues(DownWalkLengthValuesParameter, DownWalkLengthParameter);
72      AggregateValues(UpWalkLengthValuesParameter, UpWalkLengthParameter);
73      AggregateValues(DownWalkLenVarValuesParameter, DownWalkLenVarParameter);
74      AggregateValues(UpWalkLenVarValuesParameter, UpWalkLenVarParameter);
75      return base.Apply();
76    }
77
78    private void AggregateValues(ILookupParameter<ItemArray<DoubleValue>> valuesParameter, ILookupParameter<DoubleValue> averageParameter) {
79      var results = ResultsParameter.ActualValue;
80      var values = valuesParameter.ActualValue.Select(v => v.Value).ToList();
81      if (values.Count > 0) {
82        var avg = new DoubleValue(values.Average());
83        averageParameter.ActualValue = avg;
84        results.Remove(averageParameter.ActualName);
85        results.Add(new Result(averageParameter.ActualName, avg));
86      }
87    }
88
89  }
90}
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