1 | #region License Information
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2 | /* HeuristicLab
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3 | * Copyright (C) 2002-2016 Heuristic and Evolutionary Algorithms Laboratory (HEAL)
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4 | *
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5 | * This file is part of HeuristicLab.
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6 | *
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7 | * HeuristicLab is free software: you can redistribute it and/or modify
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8 | * it under the terms of the GNU General Public License as published by
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9 | * the Free Software Foundation, either version 3 of the License, or
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10 | * (at your option) any later version.
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11 | *
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12 | * HeuristicLab is distributed in the hope that it will be useful,
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13 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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14 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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15 | * GNU General Public License for more details.
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16 | *
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17 | * You should have received a copy of the GNU General Public License
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18 | * along with HeuristicLab. If not, see <http://www.gnu.org/licenses/>.
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19 | */
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20 | #endregion
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21 |
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22 | using System;
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23 | using System.Threading;
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24 | using HeuristicLab.Common;
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25 | using HeuristicLab.Core;
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26 | using HeuristicLab.Data;
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27 | using HeuristicLab.Encodings.RealVectorEncoding;
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28 | using HeuristicLab.Optimization;
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29 | using HeuristicLab.Parameters;
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30 | using HeuristicLab.Persistence.Default.CompositeSerializers.Storable;
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31 | using HeuristicLab.Problems.DataAnalysis;
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32 |
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33 | namespace HeuristicLab.Algorithms.EGO {
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34 | [Item("InfillSolver", "A RealVectorCreator that creates candidates by optimizing an infill-subproblem")]
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35 | [StorableClass]
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36 | public class InfillSolver : RealVectorCreator, ICancellableOperator {
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37 |
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38 | public ILookupParameter<IAlgorithm> InfillOptimizationAlgorithmParamter => (ILookupParameter<IAlgorithm>)Parameters["InfillAlgorithm"];
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39 | public ILookupParameter<IRegressionSolution> ModelParameter => (ILookupParameter<IRegressionSolution>)Parameters["Model"];
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40 | public ILookupParameter<BoolValue> MaximizationParameter => (ILookupParameter<BoolValue>)Parameters["Maximization"];
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41 | public ILookupParameter<BoolValue> RemoveDuplicatesParameter => (ILookupParameter<BoolValue>)Parameters["RemoveDuplicates"];
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42 | public IFixedValueParameter<DoubleValue> DuplicateCutoffParameter => (IFixedValueParameter<DoubleValue>)Parameters["Duplicates Cutoff"];
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43 | public ILookupParameter<DoubleMatrix> InfillBoundsParameter => (ILookupParameter<DoubleMatrix>)Parameters["InfillBounds"];
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44 |
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45 | public CancellationToken Cancellation { get; set; }
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46 |
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47 | [StorableConstructor]
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48 | protected InfillSolver(bool deserializing) : base(deserializing) { }
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49 | protected InfillSolver(InfillSolver original, Cloner cloner) : base(original, cloner) { }
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50 | public InfillSolver() {
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51 | Parameters.Add(new LookupParameter<IAlgorithm>("InfillAlgorithm", "The algorithm used to optimize the infill problem") { Hidden = true });
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52 | Parameters.Add(new LookupParameter<IRegressionSolution>("Model", "The RegressionSolution upon which the InfillProblem operates") { Hidden = true });
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53 | Parameters.Add(new LookupParameter<BoolValue>("Maximization", "Whether the original problem is a maximization problem") { Hidden = true });
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54 | Parameters.Add(new LookupParameter<BoolValue>("RemoveDuplicates", "Whether duplicates shall be removed") { Hidden = true });
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55 | Parameters.Add(new FixedValueParameter<DoubleValue>("Duplicates Cutoff", "The cut off radius for", new DoubleValue(0.01)) { Hidden = false });
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56 | Parameters.Add(new LookupParameter<DoubleMatrix>("InfillBounds", "The bounds applied for infill solving") { Hidden = true });
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57 | }
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58 |
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59 | public override IDeepCloneable Clone(Cloner cloner) {
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60 | return new InfillSolver(this, cloner);
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61 | }
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62 |
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63 | protected override RealVector Create(IRandom random, IntValue length, DoubleMatrix bounds) {
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64 | var infillBounds = InfillBoundsParameter.ActualValue;
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65 | if (infillBounds != null && infillBounds.Rows > 0) {
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66 | bounds = infillBounds;
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67 | }
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68 |
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69 | var alg = InfillOptimizationAlgorithmParamter.ActualValue;
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70 | var model = ModelParameter.ActualValue;
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71 | var max = MaximizationParameter.ActualValue.Value;
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72 | var res = OptimizeInfillProblem(alg, model, max, bounds, length.Value, random);
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73 | var rad = DuplicateCutoffParameter.Value.Value;
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74 | if (!RemoveDuplicatesParameter.ActualValue.Value || !(GetMinDifference(model.ProblemData.Dataset, res) < rad * rad)) return res;
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75 | for (var i = 0; i < res.Length; i++) res[i] += random.NextDouble() * rad * 2;
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76 | return res;
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77 | }
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78 |
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79 | private RealVector OptimizeInfillProblem(IAlgorithm algorithm, IRegressionSolution model, bool maximization, DoubleMatrix bounds, int length, IRandom random) {
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80 | var infillProblem = algorithm.Problem as InfillProblem;
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81 | if (infillProblem == null) throw new ArgumentException("The algortihm has no InfillProblem to solve");
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82 | infillProblem.Encoding.Length = length;
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83 | infillProblem.Encoding.Bounds = bounds;
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84 | infillProblem.Initialize(model, maximization);
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85 | var res = EgoUtilities.SyncRunSubAlgorithm(algorithm, random.Next(int.MaxValue), Cancellation);
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86 | var v = res[InfillProblem.BestInfillSolutionResultName].Value as RealVector;
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87 | algorithm.Runs.Clear();
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88 | return v;
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89 | }
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90 |
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91 | private static double GetMinDifference(IDataset data, RealVector r) {
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92 | var mind = double.MaxValue;
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93 | for (var i = 0; i < data.Rows; i++) {
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94 | var d = 0.0;
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95 | for (var j = 0; j < r.Length; j++) {
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96 | var d2 = data.GetDoubleValue("input" + j, i) - r[j];
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97 | d += d2 * d2;
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98 | }
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99 | if (!(d < mind)) continue;
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100 | mind = d;
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101 | }
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102 | return mind;
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103 | }
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104 |
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105 |
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106 |
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107 | }
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108 | }
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